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Moc04g22470 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g22470
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionReverse transcriptase
Genome locationchr4:16315754..16319789
RNA-Seq ExpressionMoc04g22470
SyntenyMoc04g22470
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN71870.1 hypothetical protein VITISV_044169 [Vitis vinifera]8.2e-1042.16Show/hide
Query:  KQKSQFASKFIHGRKYTMLKLGDWVWRHYRKDRFSFGKQLKRNPCRSIKFTFDDFKNALHGELNENYIFKVAGFHPFDVRDPFDSRTTPFEEREDDMNQS
        K+  Q+A+K   GR+  + + GDWVW H RK+RF   +  K +P     F  D     L GE N +  F V+   PFDV D  DSRT PFEE+E+D NQ 
Subjt:  KQKSQFASKFIHGRKYTMLKLGDWVWRHYRKDRFSFGKQLKRNPCRSIKFTFDDFKNALHGELNENYIFKVAGFHPFDVRDPFDSRTTPFEEREDDMNQS

Query:  VL
         +
Subjt:  VL

CAN77900.1 hypothetical protein VITISV_037350 [Vitis vinifera]5.3e-0940.95Show/hide
Query:  KQKSQFASKFIHGRKYTMLKLGDWVWRHYRKDRFSFGKQLKRNPCRSIKFTF------DDFKNALHGELNENYIFKVAGFHPFDVRDPFDSRTTPFEERE
        K+  Q+ +K   GR+  + + GDWVW H RK+RF   +Q K +P     F        + +K  L GE N +  FKV+   PF+V D  DSRT PFEER 
Subjt:  KQKSQFASKFIHGRKYTMLKLGDWVWRHYRKDRFSFGKQLKRNPCRSIKFTF------DDFKNALHGELNENYIFKVAGFHPFDVRDPFDSRTTPFEERE

Query:  DDMNQ
        +D NQ
Subjt:  DDMNQ

RVW64668.1 hypothetical protein CK203_065619 [Vitis vinifera]1.5e-0841.9Show/hide
Query:  KQKSQFASKFIHGRKYTMLKLGDWVWRHYRKDRFSFGKQLKRNPCRSIKFTF------DDFKNALHGELNENYIFKVAGFHPFDVRDPFDSRTTPFEERE
        K+  Q+A+K   GR+  + + GDWVW H RK RF   KQ K +P     F        + +K  L GE N +    V+   PFDV D  DSRT PFEER 
Subjt:  KQKSQFASKFIHGRKYTMLKLGDWVWRHYRKDRFSFGKQLKRNPCRSIKFTF------DDFKNALHGELNENYIFKVAGFHPFDVRDPFDSRTTPFEERE

Query:  DDMNQ
        +D NQ
Subjt:  DDMNQ

RVX10182.1 hypothetical protein CK203_016317 [Vitis vinifera]5.3e-0941.9Show/hide
Query:  KQKSQFASKFIHGRKYTMLKLGDWVWRHYRKDRFSFGKQLKRNPCRSIKF----TFDDFKNALH--GELNENYIFKVAGFHPFDVRDPFDSRTTPFEERE
        K+  Q+A+K   GR+  + + GDWVW H RK+RF   ++ K +P     F      +D  N L   GE N +  F V+   PFDV D  DSRT PFEER 
Subjt:  KQKSQFASKFIHGRKYTMLKLGDWVWRHYRKDRFSFGKQLKRNPCRSIKF----TFDDFKNALH--GELNENYIFKVAGFHPFDVRDPFDSRTTPFEERE

Query:  DDMNQ
        +D NQ
Subjt:  DDMNQ

XP_023880430.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111992800, partial [Quercus suber]5.3e-0939.62Show/hide
Query:  GKQKSQFASKFIHGRKYTMLKLGDWVWRHYRKDRFSFGKQLKRNPCRSIKFTF------DDFKNALHGELNENYIFKVAGFHPFDVRDPFDSRTTPFEER
        GK+  Q+A+K   GR+  + +  DWVW H RK+RF   ++ K +P     F        + +K  L GE N +  F V+   PFDV D  DSRT PFEE+
Subjt:  GKQKSQFASKFIHGRKYTMLKLGDWVWRHYRKDRFSFGKQLKRNPCRSIKFTF------DDFKNALHGELNENYIFKVAGFHPFDVRDPFDSRTTPFEER

Query:  EDDMNQ
         +D NQ
Subjt:  EDDMNQ

TrEMBL top hitse value%identityAlignment
A0A2N9IJ01 Uncharacterized protein2.2e-0838.53Show/hide
Query:  KQKSQFASKFIHGRKYTMLKLGDWVWRHYRKDRFSFGKQLKRNPCRSIKFTF------DDFKNALHGELNENYIFKVAGFHPFDVRDPFDSRTTPFEERE
        K+  Q+A+K   GR+  + + GDWVW H RK+RF   ++ K +P     F        + +K  L GE N +  F V+    FDV D  DSR+ PFEER 
Subjt:  KQKSQFASKFIHGRKYTMLKLGDWVWRHYRKDRFSFGKQLKRNPCRSIKFTF------DDFKNALHGELNENYIFKVAGFHPFDVRDPFDSRTTPFEERE

Query:  DDMNQSVLV
        +D NQ  L+
Subjt:  DDMNQSVLV

A0A438FXL0 Uncharacterized protein7.5e-0941.9Show/hide
Query:  KQKSQFASKFIHGRKYTMLKLGDWVWRHYRKDRFSFGKQLKRNPCRSIKFTF------DDFKNALHGELNENYIFKVAGFHPFDVRDPFDSRTTPFEERE
        K+  Q+A+K   GR+  + + GDWVW H RK RF   KQ K +P     F        + +K  L GE N +    V+   PFDV D  DSRT PFEER 
Subjt:  KQKSQFASKFIHGRKYTMLKLGDWVWRHYRKDRFSFGKQLKRNPCRSIKFTF------DDFKNALHGELNENYIFKVAGFHPFDVRDPFDSRTTPFEERE

Query:  DDMNQ
        +D NQ
Subjt:  DDMNQ

A0A438JMM0 Uncharacterized protein2.6e-0941.9Show/hide
Query:  KQKSQFASKFIHGRKYTMLKLGDWVWRHYRKDRFSFGKQLKRNPCRSIKF----TFDDFKNALH--GELNENYIFKVAGFHPFDVRDPFDSRTTPFEERE
        K+  Q+A+K   GR+  + + GDWVW H RK+RF   ++ K +P     F      +D  N L   GE N +  F V+   PFDV D  DSRT PFEER 
Subjt:  KQKSQFASKFIHGRKYTMLKLGDWVWRHYRKDRFSFGKQLKRNPCRSIKF----TFDDFKNALH--GELNENYIFKVAGFHPFDVRDPFDSRTTPFEERE

Query:  DDMNQ
        +D NQ
Subjt:  DDMNQ

A5AG41 Integrase catalytic domain-containing protein2.6e-0940.95Show/hide
Query:  KQKSQFASKFIHGRKYTMLKLGDWVWRHYRKDRFSFGKQLKRNPCRSIKFTF------DDFKNALHGELNENYIFKVAGFHPFDVRDPFDSRTTPFEERE
        K+  Q+ +K   GR+  + + GDWVW H RK+RF   +Q K +P     F        + +K  L GE N +  FKV+   PF+V D  DSRT PFEER 
Subjt:  KQKSQFASKFIHGRKYTMLKLGDWVWRHYRKDRFSFGKQLKRNPCRSIKFTF------DDFKNALHGELNENYIFKVAGFHPFDVRDPFDSRTTPFEERE

Query:  DDMNQ
        +D NQ
Subjt:  DDMNQ

A5B004 Reverse transcriptase domain-containing protein4.0e-1042.16Show/hide
Query:  KQKSQFASKFIHGRKYTMLKLGDWVWRHYRKDRFSFGKQLKRNPCRSIKFTFDDFKNALHGELNENYIFKVAGFHPFDVRDPFDSRTTPFEEREDDMNQS
        K+  Q+A+K   GR+  + + GDWVW H RK+RF   +  K +P     F  D     L GE N +  F V+   PFDV D  DSRT PFEE+E+D NQ 
Subjt:  KQKSQFASKFIHGRKYTMLKLGDWVWRHYRKDRFSFGKQLKRNPCRSIKFTFDDFKNALHGELNENYIFKVAGFHPFDVRDPFDSRTTPFEEREDDMNQS

Query:  VL
         +
Subjt:  VL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACAACCCGATTATGGTCCGACCAATAACTAGAAGTCCCTCTCAGGCCAGTGAGAGGGTGGAGCCCCTTGATCAAGTCCCGGAGTCAGCATTTAAGAGAACA
CTCATCTACTCCCTAAAGTCGGGGAAGGGTAAATTCTATCTTGTGAAGTTATGTTTCCAGCTCCCCACTCGGTCTCGTCCCCAAAATGGTTTGTCTAGTGTTTCC
CTTGAGTTTTTACAGAAGGCTAGAACACTCATTGAGAAGATTGAACCAAAGATTGCTTCCAAAGTACAAAATAAAAGTCAACATGTGGTTTACAAGGCTGAAGCA
TCTCGTGGAAAGCAAAAGTCCCAATTTGCTTCTAAATTCATTCATGGCAGGAAGTATACAATGTTAAAACTGGGTGATTGGGTTTGGAGACACTATCGGAAGGAT
CGCTTTTCTTTTGGAAAGCAGTTGAAGAGAAACCCATGTAGATCTATAAAGTTTACTTTTGACGATTTTAAGAATGCTCTACACGGCGAGTTAAATGAAAATTAC
ATATTCAAGGTTGCTGGTTTTCATCCATTTGATGTAAGAGATCCTTTTGATTCGAGGACGACTCCTTTTGAAGAAAGGGAGGATGATATGAACCAAAGTGTCTTA
GTCCTCAAGATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAACAACCCGATTATGGTCCGACCAATAACTAGAAGTCCCTCTCAGGCCAGTGAGAGGGTGGAGCCCCTTGATCAAGTCCCGGAGTCAGCATTTAAGAGAACA
CTCATCTACTCCCTAAAGTCGGGGAAGGGTAAATTCTATCTTGTGAAGTTATGTTTCCAGCTCCCCACTCGGTCTCGTCCCCAAAATGGTTTGTCTAGTGTTTCC
CTTGAGTTTTTACAGAAGGCTAGAACACTCATTGAGAAGATTGAACCAAAGATTGCTTCCAAAGTACAAAATAAAAGTCAACATGTGGTTTACAAGGCTGAAGCA
TCTCGTGGAAAGCAAAAGTCCCAATTTGCTTCTAAATTCATTCATGGCAGGAAGTATACAATGTTAAAACTGGGTGATTGGGTTTGGAGACACTATCGGAAGGAT
CGCTTTTCTTTTGGAAAGCAGTTGAAGAGAAACCCATGTAGATCTATAAAGTTTACTTTTGACGATTTTAAGAATGCTCTACACGGCGAGTTAAATGAAAATTAC
ATATTCAAGGTTGCTGGTTTTCATCCATTTGATGTAAGAGATCCTTTTGATTCGAGGACGACTCCTTTTGAAGAAAGGGAGGATGATATGAACCAAAGTGTCTTA
GTCCTCAAGATTTAA
Protein sequenceShow/hide protein sequence
MNNPIMVRPITRSPSQASERVEPLDQVPESAFKRTLIYSLKSGKGKFYLVKLCFQLPTRSRPQNGLSSVSLEFLQKARTLIEKIEPKIASKVQNKSQHVVYKAEA
SRGKQKSQFASKFIHGRKYTMLKLGDWVWRHYRKDRFSFGKQLKRNPCRSIKFTFDDFKNALHGELNENYIFKVAGFHPFDVRDPFDSRTTPFEEREDDMNQSVL
VLKI