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Moc04g22500 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g22500
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr4:16331274..16334402
RNA-Seq ExpressionMoc04g22500
SyntenyMoc04g22500
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF8410356.1 hypothetical protein HHK36_002884 [Tetracentron sinense]1.1e-1040.19Show/hide
Query:  DEPLRVGVHNTFKIENELSGHAMKEQSVSQQF---EYCLVKMGNLSVSKVRGIRDVCLKTDEGAKLLLLCVRYIRSFRFNLLSARKLDNDGCNNEFVWGC
        DE + +     + I+   S HA   +     +   +Y +V+M N  +SK+ GI DVCL+T+ G KL+L  VR++   R NL+SA KLD+ G +N F  G 
Subjt:  DEPLRVGVHNTFKIENELSGHAMKEQSVSQQF---EYCLVKMGNLSVSKVRGIRDVCLKTDEGAKLLLLCVRYIRSFRFNLLSARKLDNDGCNNEFVWGC

Query:  WKLKRES
        WKL RES
Subjt:  WKLKRES

RVW42505.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]7.1e-1050Show/hide
Query:  QFEYCLVKMGNLSVSKVRGIRDVCLKTDEGAKLLLLCVRYIRSFRFNLLSARKLDNDGCNNEFVWGCWKLKRES
        Q ++  V+MGN  VSK+ G+ D+CL+T+ G KLLL  VR++   R NL+SA KLD++G NN F  G WKL + S
Subjt:  QFEYCLVKMGNLSVSKVRGIRDVCLKTDEGAKLLLLCVRYIRSFRFNLLSARKLDNDGCNNEFVWGCWKLKRES

RVW84195.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]2.1e-0948.65Show/hide
Query:  QFEYCLVKMGNLSVSKVRGIRDVCLKTDEGAKLLLLCVRYIRSFRFNLLSARKLDNDGCNNEFVWGCWKLKRES
        Q ++  V+MGN  VSK+ G+ D+CL+T+ G KLLL  VR++   R NL+S  KLD++G NN F  G WKL + S
Subjt:  QFEYCLVKMGNLSVSKVRGIRDVCLKTDEGAKLLLLCVRYIRSFRFNLLSARKLDNDGCNNEFVWGCWKLKRES

RVW91307.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]4.2e-1049.38Show/hide
Query:  QFEYCLVKMGNLSVSKVRGIRDVCLKTDEGAKLLLLCVRYIRSFRFNLLSARKLDNDGCNNEFVWGCWKLKRES---KKGN
        Q ++  V+MGN +VSK+ G+ D+CL+T+ G KLLL  VR++   R NL+SA KLD++G NN F  G WKL + S    KGN
Subjt:  QFEYCLVKMGNLSVSKVRGIRDVCLKTDEGAKLLLLCVRYIRSFRFNLLSARKLDNDGCNNEFVWGCWKLKRES---KKGN

RVW94144.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]7.1e-1050Show/hide
Query:  QFEYCLVKMGNLSVSKVRGIRDVCLKTDEGAKLLLLCVRYIRSFRFNLLSARKLDNDGCNNEFVWGCWKLKRES
        Q ++  V+MGN  VSK+ G+ D+CL+T+ G KLLL  VR++   R NL+SA KLD++G NN F  G WKL + S
Subjt:  QFEYCLVKMGNLSVSKVRGIRDVCLKTDEGAKLLLLCVRYIRSFRFNLLSARKLDNDGCNNEFVWGCWKLKRES

TrEMBL top hitse value%identityAlignment
A0A438BTH6 Retrovirus-related Pol polyprotein from transposon TNT 1-941.0e-0948.65Show/hide
Query:  QFEYCLVKMGNLSVSKVRGIRDVCLKTDEGAKLLLLCVRYIRSFRFNLLSARKLDNDGCNNEFVWGCWKLKRES
        Q ++  V+MGN  VSK+ G+ D+CL+T+ G KLLL  VR++   R NL+S  KLD++G NN F  G WKL + S
Subjt:  QFEYCLVKMGNLSVSKVRGIRDVCLKTDEGAKLLLLCVRYIRSFRFNLLSARKLDNDGCNNEFVWGCWKLKRES

A0A438E432 Retrovirus-related Pol polyprotein from transposon TNT 1-943.5e-1050Show/hide
Query:  QFEYCLVKMGNLSVSKVRGIRDVCLKTDEGAKLLLLCVRYIRSFRFNLLSARKLDNDGCNNEFVWGCWKLKRES
        Q ++  V+MGN  VSK+ G+ D+CL+T+ G KLLL  VR++   R NL+SA KLD++G NN F  G WKL + S
Subjt:  QFEYCLVKMGNLSVSKVRGIRDVCLKTDEGAKLLLLCVRYIRSFRFNLLSARKLDNDGCNNEFVWGCWKLKRES

A0A438HI91 Retrovirus-related Pol polyprotein from transposon TNT 1-941.0e-0948.65Show/hide
Query:  QFEYCLVKMGNLSVSKVRGIRDVCLKTDEGAKLLLLCVRYIRSFRFNLLSARKLDNDGCNNEFVWGCWKLKRES
        Q ++  V+MGN  VSK+ G+ D+CL+T+ G KLLL  VR++   R NL+S  KLD++G NN F  G WKL + S
Subjt:  QFEYCLVKMGNLSVSKVRGIRDVCLKTDEGAKLLLLCVRYIRSFRFNLLSARKLDNDGCNNEFVWGCWKLKRES

A0A438I3N7 Retrovirus-related Pol polyprotein from transposon TNT 1-942.0e-1049.38Show/hide
Query:  QFEYCLVKMGNLSVSKVRGIRDVCLKTDEGAKLLLLCVRYIRSFRFNLLSARKLDNDGCNNEFVWGCWKLKRES---KKGN
        Q ++  V+MGN +VSK+ G+ D+CL+T+ G KLLL  VR++   R NL+SA KLD++G NN F  G WKL + S    KGN
Subjt:  QFEYCLVKMGNLSVSKVRGIRDVCLKTDEGAKLLLLCVRYIRSFRFNLLSARKLDNDGCNNEFVWGCWKLKRES---KKGN

A0A438IBT7 Retrovirus-related Pol polyprotein from transposon TNT 1-943.5e-1050Show/hide
Query:  QFEYCLVKMGNLSVSKVRGIRDVCLKTDEGAKLLLLCVRYIRSFRFNLLSARKLDNDGCNNEFVWGCWKLKRES
        Q ++  V+MGN  VSK+ G+ D+CL+T+ G KLLL  VR++   R NL+SA KLD++G NN F  G WKL + S
Subjt:  QFEYCLVKMGNLSVSKVRGIRDVCLKTDEGAKLLLLCVRYIRSFRFNLLSARKLDNDGCNNEFVWGCWKLKRES

SwissProt top hitse value%identityAlignment
P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-941.3e-0934.65Show/hide
Query:  GVHNTFKIENELSGHAMKEQSVSQQF---EYCLVKMGNLSVSKVRGIRDVCLKTDEGAKLLLLCVRYIRSFRFNLLSARKLDNDGCNNEFVWGCWKLKRE
        G  + + ++   S HA   + +  ++   ++  VKMGN S SK+ GI D+C+KT+ G  L+L  VR++   R NL+S   LD DG  + F    W+L + 
Subjt:  GVHNTFKIENELSGHAMKEQSVSQQF---EYCLVKMGNLSVSKVRGIRDVCLKTDEGAKLLLLCVRYIRSFRFNLLSARKLDNDGCNNEFVWGCWKLKRE

Query:  S
        S
Subjt:  S

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCGAAACTTCCTCGAACCGTGAACTGGAGAAGCGGAACCACGCTGGAAAGCACCCGGGACAGCTCCGCTGCTGCAGCAAAACAGTCGCAGCTATAGGGCTA
TGGCGCTGTTTGATGTTCTTCGGCAACGCCATGGGGCTGTCTGCATGGCCTGCTTTATCAAAGGACGAGCCCTTACGGGTTGGAGTCCATAACACATTCAAGATT
GAGAATGAGTTGTCTGGTCATGCTATGAAAGAGCAATCTGTTAGTCAACAGTTTGAATATTGCTTAGTGAAGATGGGGAATTTGAGTGTCTCTAAAGTTAGAGGA
ATTAGAGATGTTTGTTTGAAGACAGACGAAGGGGCCAAGTTGTTGTTGCTATGTGTCAGGTATATTCGTAGCTTCAGATTCAATTTGTTATCCGCAAGGAAGCTA
GATAATGATGGTTGCAACAATGAGTTTGTTTGGGGCTGCTGGAAGCTCAAGAGGGAATCAAAGAAAGGGAACGGACTTGGGTGGGAGCACCAAGTCATCAAGGGA
ATCTTTCTTCAGAAGTCGTTGGGTTCGATAGAGAAACGAAGCGACGGGGACCACTTAGATCGAGTGGAGCACGTGGTTGTATCTCTAGCGTTTGGAGGACAAGAC
CACGTAGGATTGCTCAATCTCGGGGTAATCACAGATAGAGCTTGGGTAGGGCCGAGCAGTGTGGATCAGTTTGTTGATAGAGGAGTTAGAATTGTGCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCCGAAACTTCCTCGAACCGTGAACTGGAGAAGCGGAACCACGCTGGAAAGCACCCGGGACAGCTCCGCTGCTGCAGCAAAACAGTCGCAGCTATAGGGCTA
TGGCGCTGTTTGATGTTCTTCGGCAACGCCATGGGGCTGTCTGCATGGCCTGCTTTATCAAAGGACGAGCCCTTACGGGTTGGAGTCCATAACACATTCAAGATT
GAGAATGAGTTGTCTGGTCATGCTATGAAAGAGCAATCTGTTAGTCAACAGTTTGAATATTGCTTAGTGAAGATGGGGAATTTGAGTGTCTCTAAAGTTAGAGGA
ATTAGAGATGTTTGTTTGAAGACAGACGAAGGGGCCAAGTTGTTGTTGCTATGTGTCAGGTATATTCGTAGCTTCAGATTCAATTTGTTATCCGCAAGGAAGCTA
GATAATGATGGTTGCAACAATGAGTTTGTTTGGGGCTGCTGGAAGCTCAAGAGGGAATCAAAGAAAGGGAACGGACTTGGGTGGGAGCACCAAGTCATCAAGGGA
ATCTTTCTTCAGAAGTCGTTGGGTTCGATAGAGAAACGAAGCGACGGGGACCACTTAGATCGAGTGGAGCACGTGGTTGTATCTCTAGCGTTTGGAGGACAAGAC
CACGTAGGATTGCTCAATCTCGGGGTAATCACAGATAGAGCTTGGGTAGGGCCGAGCAGTGTGGATCAGTTTGTTGATAGAGGAGTTAGAATTGTGCCTTGA
Protein sequenceShow/hide protein sequence
MPETSSNRELEKRNHAGKHPGQLRCCSKTVAAIGLWRCLMFFGNAMGLSAWPALSKDEPLRVGVHNTFKIENELSGHAMKEQSVSQQFEYCLVKMGNLSVSKVRG
IRDVCLKTDEGAKLLLLCVRYIRSFRFNLLSARKLDNDGCNNEFVWGCWKLKRESKKGNGLGWEHQVIKGIFLQKSLGSIEKRSDGDHLDRVEHVVVSLAFGGQD
HVGLLNLGVITDRAWVGPSSVDQFVDRGVRIVP