; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc04g22850 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g22850
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr4:16597212..16599308
RNA-Seq ExpressionMoc04g22850
SyntenyMoc04g22850
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022138036.1 uncharacterized protein LOC111009292 [Momordica charantia]2.1e-0835.77Show/hide
Query:  LLHWPERTKANSSKSDKSKYYKFHQYHRHDTTDYRDLKYQVKSLVQIGDSRSPHRESGRTRTA---------HFEEGEASIQVKPHNHVLVLVADINHVP
        LL WPER KA  SK  K +Y  FH  H H T D  DLK +V+ L++ G  +    +   T+            F + EA+  + PHN  LV+   I +  
Subjt:  LLHWPERTKANSSKSDKSKYYKFHQYHRHDTTDYRDLKYQVKSLVQIGDSRSPHRESGRTRTA---------HFEEGEASIQVKPHNHVLVLVADINHVP

Query:  THQMLVDGASSTNVFVLEVLQTL
         HQ+LVDG SS N+  L   + +
Subjt:  THQMLVDGASSTNVFVLEVLQTL

XP_022150028.1 uncharacterized protein LOC111018300 [Momordica charantia]3.0e-0729.9Show/hide
Query:  LLHWPERTKANSSKSDKSKYYKFHQYHRHDTTDYRDLKYQVKSLVQIG-----------------DSRSP------------HRESGRTRTA--------
        LL WPER  A  SK  K +Y  FH+ H H T D  DLK +VK L+Q G                 DS+SP             RE GR R A        
Subjt:  LLHWPERTKANSSKSDKSKYYKFHQYHRHDTTDYRDLKYQVKSLVQIG-----------------DSRSP------------HRESGRTRTA--------

Query:  ------------------HFEEGEASIQVKPHNHVLVLVADINHVPTHQMLVDGASSTNVFVLEVLQTLKWDSTKLKRCPPNWSTSQATTSTPE
                           F E EA+  + PHN VLV+   I +   H++LVDG SS ++  L   + +       K  P +    +     PE
Subjt:  ------------------HFEEGEASIQVKPHNHVLVLVADINHVPTHQMLVDGASSTNVFVLEVLQTLKWDSTKLKRCPPNWSTSQATTSTPE

XP_022156748.1 uncharacterized protein LOC111023587 [Momordica charantia]2.3e-0732.21Show/hide
Query:  LLHWPERTKANSSKSDKSKYYKFHQYHRHDTTDYRDLKYQVKSLVQIG---------DSRSPHRESGRTR---------------TAHFEEGEASIQVKP
        LL WPER KA S+K  K +Y  FH+ H H T D  DLK +V+ L++ G           ++  RE+   R               T  F E EA+     
Subjt:  LLHWPERTKANSSKSDKSKYYKFHQYHRHDTTDYRDLKYQVKSLVQIG---------DSRSPHRESGRTR---------------TAHFEEGEASIQVKP

Query:  HNHVLVLVADINHVPTHQMLVDGASSTNVFVLEVLQTLKWDSTKLKRCP
        HN  LV+   I +V  H++LVDG SS ++      + +  +   LK  P
Subjt:  HNHVLVLVADINHVPTHQMLVDGASSTNVFVLEVLQTLKWDSTKLKRCP

XP_022158513.1 uncharacterized protein LOC111024986 [Momordica charantia]1.5e-1943.45Show/hide
Query:  DGTPIVSLLHWPERTKANSSKSDKSKYYKFHQYHRHDTTDYRDLKYQVKSLVQ-------------IGDSRSP-HRESGRTRTAHFEEGEASIQVKPHNH
        D  P+ +LL WPE +++++ K  +S YYKFH+ HRH+T + RD+K +V+SL Q             IG+ R    R++ R     F   E + Q++PHN 
Subjt:  DGTPIVSLLHWPERTKANSSKSDKSKYYKFHQYHRHDTTDYRDLKYQVKSLVQ-------------IGDSRSP-HRESGRTRTAHFEEGEASIQVKPHNH

Query:  VLVLVADINHVPTHQMLVDGASSTNVFVLEVLQTLKWDSTKLKRC
        V V+VA I+H PT  MLVDG S  NV  L +L TL WD T LKRC
Subjt:  VLVLVADINHVPTHQMLVDGASSTNVFVLEVLQTLKWDSTKLKRC

XP_030949868.1 uncharacterized protein LOC115973760 [Quercus lobata]3.0e-0727.92Show/hide
Query:  NGSKTSLDKDKSSDRSVLANKGSHPSRTKSKADRHSDAPNTCLDDGTPIVS-------------LLHWPERTKANSSKSDKSKYYKFHQYHRHDTTDYRD
        +G+  S +K K  +      K     R     +R  +  N      TP+V               L WP+   +     +K KY +FH+ H H T D RD
Subjt:  NGSKTSLDKDKSSDRSVLANKGSHPSRTKSKADRHSDAPNTCLDDGTPIVS-------------LLHWPERTKANSSKSDKSKYYKFHQYHRHDTTDYRD

Query:  LKYQVKSLVQIG-----------DSRSPHRESGRTRTAHFEEGEASIQVKPHNHVLVLVADINHVPTHQMLVDGASSTNVFVLEVLQTLKWDSTKLK
        LK Q+K L++ G            S  P ++   +   HF E +A    +PH+  LV++  I    T ++LVDG SS ++  L   Q LK D  +L+
Subjt:  LKYQVKSLVQIG-----------DSRSPHRESGRTRTAHFEEGEASIQVKPHNHVLVLVADINHVPTHQMLVDGASSTNVFVLEVLQTLKWDSTKLK

TrEMBL top hitse value%identityAlignment
A0A6J1C8I1 uncharacterized protein LOC1110092921.0e-0835.77Show/hide
Query:  LLHWPERTKANSSKSDKSKYYKFHQYHRHDTTDYRDLKYQVKSLVQIGDSRSPHRESGRTRTA---------HFEEGEASIQVKPHNHVLVLVADINHVP
        LL WPER KA  SK  K +Y  FH  H H T D  DLK +V+ L++ G  +    +   T+            F + EA+  + PHN  LV+   I +  
Subjt:  LLHWPERTKANSSKSDKSKYYKFHQYHRHDTTDYRDLKYQVKSLVQIGDSRSPHRESGRTRTA---------HFEEGEASIQVKPHNHVLVLVADINHVP

Query:  THQMLVDGASSTNVFVLEVLQTL
         HQ+LVDG SS N+  L   + +
Subjt:  THQMLVDGASSTNVFVLEVLQTL

A0A6J1D8C9 uncharacterized protein LOC1110183001.4e-0729.9Show/hide
Query:  LLHWPERTKANSSKSDKSKYYKFHQYHRHDTTDYRDLKYQVKSLVQIG-----------------DSRSP------------HRESGRTRTA--------
        LL WPER  A  SK  K +Y  FH+ H H T D  DLK +VK L+Q G                 DS+SP             RE GR R A        
Subjt:  LLHWPERTKANSSKSDKSKYYKFHQYHRHDTTDYRDLKYQVKSLVQIG-----------------DSRSP------------HRESGRTRTA--------

Query:  ------------------HFEEGEASIQVKPHNHVLVLVADINHVPTHQMLVDGASSTNVFVLEVLQTLKWDSTKLKRCPPNWSTSQATTSTPE
                           F E EA+  + PHN VLV+   I +   H++LVDG SS ++  L   + +       K  P +    +     PE
Subjt:  ------------------HFEEGEASIQVKPHNHVLVLVADINHVPTHQMLVDGASSTNVFVLEVLQTLKWDSTKLKRCPPNWSTSQATTSTPE

A0A6J1DRG9 uncharacterized protein LOC1110235871.1e-0732.21Show/hide
Query:  LLHWPERTKANSSKSDKSKYYKFHQYHRHDTTDYRDLKYQVKSLVQIG---------DSRSPHRESGRTR---------------TAHFEEGEASIQVKP
        LL WPER KA S+K  K +Y  FH+ H H T D  DLK +V+ L++ G           ++  RE+   R               T  F E EA+     
Subjt:  LLHWPERTKANSSKSDKSKYYKFHQYHRHDTTDYRDLKYQVKSLVQIG---------DSRSPHRESGRTR---------------TAHFEEGEASIQVKP

Query:  HNHVLVLVADINHVPTHQMLVDGASSTNVFVLEVLQTLKWDSTKLKRCP
        HN  LV+   I +V  H++LVDG SS ++      + +  +   LK  P
Subjt:  HNHVLVLVADINHVPTHQMLVDGASSTNVFVLEVLQTLKWDSTKLKRCP

A0A6J1DWB0 uncharacterized protein LOC1110249867.4e-2043.45Show/hide
Query:  DGTPIVSLLHWPERTKANSSKSDKSKYYKFHQYHRHDTTDYRDLKYQVKSLVQ-------------IGDSRSP-HRESGRTRTAHFEEGEASIQVKPHNH
        D  P+ +LL WPE +++++ K  +S YYKFH+ HRH+T + RD+K +V+SL Q             IG+ R    R++ R     F   E + Q++PHN 
Subjt:  DGTPIVSLLHWPERTKANSSKSDKSKYYKFHQYHRHDTTDYRDLKYQVKSLVQ-------------IGDSRSP-HRESGRTRTAHFEEGEASIQVKPHNH

Query:  VLVLVADINHVPTHQMLVDGASSTNVFVLEVLQTLKWDSTKLKRC
        V V+VA I+H PT  MLVDG S  NV  L +L TL WD T LKRC
Subjt:  VLVLVADINHVPTHQMLVDGASSTNVFVLEVLQTLKWDSTKLKRC

A0A6J1E032 uncharacterized protein LOC1110251311.4e-0732.7Show/hide
Query:  LLHWPERTKANSSKSDKSKYYKFHQYHRHDTTDYRDLKYQVKSLVQIG----------------DSRSP------------HRESGRTR-----------
        LL WPER KA S+K  K +Y  FH+ H H T D  DLK +V+ L+Q G                  +SP             RESGR R           
Subjt:  LLHWPERTKANSSKSDKSKYYKFHQYHRHDTTDYRDLKYQVKSLVQIG----------------DSRSP------------HRESGRTR-----------

Query:  ---------------TAHFEEGEASIQVKPHNHVLVLVADINHVPTHQMLVDGASSTNV
                       T  F E EA+  + PHN+ LV+   I +V  H++LVDG SS ++
Subjt:  ---------------TAHFEEGEASIQVKPHNHVLVLVADINHVPTHQMLVDGASSTNV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATGTCAGCCACATAGAGGTGGTAGATCGCAGTCCTGCAGGTGGAGGTGCGATCAACCAATTGTCGGGGGCGTACACCCCCGCCAGGCGTCGTACAGTACGG
AGCGTCCCTACCATCTCAACTGTCGTCCTTCCTGGTCGGCCATCTAATATTGTAAAAGAGATGGGCCCCCACCTTCACGAAGACACTACATCGACGTCGAGTTTT
CGGATTGCAAACTCATTGGTTCTCTGGCGAAGTCACTCATTCGAAGGACATGTGGACCTCTCCACAATTCGCCATCAACAGTTTGTGCCGTCTATGTCCATCGAC
AAAGAACGTCGGCATGACAAGCCGATTGACAAGGCCATCTCAACTCCTCCTGTCCCTCAAAAGGCCAGGGGAGCCCGGGATGCTGTTAATTGCCTTTGTCCTTTG
GGCCACCTCGGCAAACGGAAGGTGGGGCAACCCTACCATAAAAGCTTCAGACTGGATATAATGAAGCTGAGTAGTGTCGGGGCTTCTCAAAAACCCTCGTATGCC
CTGCCTAGCAATGGTTCCAAAACCAGCCTCGATAAAGACAAGTCGTCCGACCGATCCGTGTTAGCCAATAAGGGATCCCATCCATCCCGCACTAAGTCTAAAGCA
GACCGACATTCCGATGCACCAAATACTTGCTTGGATGACGGAACACCCATTGTCAGCCTGCTTCACTGGCCAGAACGAACTAAGGCCAACTCCTCCAAGAGTGAC
AAAAGCAAATACTATAAGTTCCACCAGTACCATCGACACGATACCACCGACTATCGTGACCTGAAATATCAGGTCAAGTCCCTAGTCCAGATAGGCGACTCGAGA
AGTCCTCACCGCGAGAGCGGCAGAACCAGAACTGCCCACTTCGAGGAGGGAGAAGCCAGCATTCAAGTTAAACCACACAACCATGTGCTCGTGCTCGTGGCGGAC
ATTAATCACGTGCCCACACACCAGATGTTGGTAGATGGTGCAAGCTCGACCAACGTCTTCGTATTGGAGGTGCTACAAACCCTCAAGTGGGACTCTACCAAGCTA
AAGAGGTGCCCTCCCAACTGGTCAACATCTCAGGCGACAACGTCTACCCCAGAGGTAGCATCGAACTGCCGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGCATGTCAGCCACATAGAGGTGGTAGATCGCAGTCCTGCAGGTGGAGGTGCGATCAACCAATTGTCGGGGGCGTACACCCCCGCCAGGCGTCGTACAGTACGG
AGCGTCCCTACCATCTCAACTGTCGTCCTTCCTGGTCGGCCATCTAATATTGTAAAAGAGATGGGCCCCCACCTTCACGAAGACACTACATCGACGTCGAGTTTT
CGGATTGCAAACTCATTGGTTCTCTGGCGAAGTCACTCATTCGAAGGACATGTGGACCTCTCCACAATTCGCCATCAACAGTTTGTGCCGTCTATGTCCATCGAC
AAAGAACGTCGGCATGACAAGCCGATTGACAAGGCCATCTCAACTCCTCCTGTCCCTCAAAAGGCCAGGGGAGCCCGGGATGCTGTTAATTGCCTTTGTCCTTTG
GGCCACCTCGGCAAACGGAAGGTGGGGCAACCCTACCATAAAAGCTTCAGACTGGATATAATGAAGCTGAGTAGTGTCGGGGCTTCTCAAAAACCCTCGTATGCC
CTGCCTAGCAATGGTTCCAAAACCAGCCTCGATAAAGACAAGTCGTCCGACCGATCCGTGTTAGCCAATAAGGGATCCCATCCATCCCGCACTAAGTCTAAAGCA
GACCGACATTCCGATGCACCAAATACTTGCTTGGATGACGGAACACCCATTGTCAGCCTGCTTCACTGGCCAGAACGAACTAAGGCCAACTCCTCCAAGAGTGAC
AAAAGCAAATACTATAAGTTCCACCAGTACCATCGACACGATACCACCGACTATCGTGACCTGAAATATCAGGTCAAGTCCCTAGTCCAGATAGGCGACTCGAGA
AGTCCTCACCGCGAGAGCGGCAGAACCAGAACTGCCCACTTCGAGGAGGGAGAAGCCAGCATTCAAGTTAAACCACACAACCATGTGCTCGTGCTCGTGGCGGAC
ATTAATCACGTGCCCACACACCAGATGTTGGTAGATGGTGCAAGCTCGACCAACGTCTTCGTATTGGAGGTGCTACAAACCCTCAAGTGGGACTCTACCAAGCTA
AAGAGGTGCCCTCCCAACTGGTCAACATCTCAGGCGACAACGTCTACCCCAGAGGTAGCATCGAACTGCCGCTAG
Protein sequenceShow/hide protein sequence
MHVSHIEVVDRSPAGGGAINQLSGAYTPARRRTVRSVPTISTVVLPGRPSNIVKEMGPHLHEDTTSTSSFRIANSLVLWRSHSFEGHVDLSTIRHQQFVPSMSID
KERRHDKPIDKAISTPPVPQKARGARDAVNCLCPLGHLGKRKVGQPYHKSFRLDIMKLSSVGASQKPSYALPSNGSKTSLDKDKSSDRSVLANKGSHPSRTKSKA
DRHSDAPNTCLDDGTPIVSLLHWPERTKANSSKSDKSKYYKFHQYHRHDTTDYRDLKYQVKSLVQIGDSRSPHRESGRTRTAHFEEGEASIQVKPHNHVLVLVAD
INHVPTHQMLVDGASSTNVFVLEVLQTLKWDSTKLKRCPPNWSTSQATTSTPEVASNCR