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Moc04g23040 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g23040
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr4:16688650..16690039
RNA-Seq ExpressionMoc04g23040
SyntenyMoc04g23040
Gene Ontology termsGO:0006310 - DNA recombination (biological process)
GO:0015074 - DNA integration (biological process)
GO:0071897 - DNA biosynthetic process (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0005634 - nucleus (cellular component)
GO:0030430 - host cell cytoplasm (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003887 - DNA-directed DNA polymerase activity (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022147189.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111016200 [Momordica charantia]2.5e-1378.43Show/hide
Query:  MPQYTTYNPLYDVSVGQYPPPFVEGAQQVPTNIIFLEPEQIVALPTVLSLG
        MPQYTTYNPLYDV VGQY  PFV+GAQQ+PTNIIF EPEQ+++ PTVL+LG
Subjt:  MPQYTTYNPLYDVSVGQYPPPFVEGAQQVPTNIIFLEPEQIVALPTVLSLG

XP_022149382.1 uncharacterized protein LOC111017812 [Momordica charantia]3.4e-2366.28Show/hide
Query:  VADPAISSNLVHDPQETPSYPHRFGLPFKPVVEGSMPQYTTYNPLYDVSVGQYPPPFVEGAQQVPTNIIFLEPEQIVALPTVLSLG
        VADP  SSN VHD QE P YP  +  P + V EG M Q TTYNPLYD+ VGQYPPPFV+G QQ+PTNIIF EPEQ++  PTVL+LG
Subjt:  VADPAISSNLVHDPQETPSYPHRFGLPFKPVVEGSMPQYTTYNPLYDVSVGQYPPPFVEGAQQVPTNIIFLEPEQIVALPTVLSLG

XP_022155098.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111022231, partial [Momordica charantia]1.8e-1653.93Show/hide
Query:  AISSNLVHDPQETPSYPHRF-------GLPFKPVVEGSMPQYTTYNPLYDVSVGQYPPPFVEGAQQVPTNIIFLEPEQIVALPTVLSLG
        A +SN +H+P  TP +P  F       G  F+P+ EG M QYTTYNPLYD+  GQ+PPP V G  Q P  IIF EPEQ++A PTVL+LG
Subjt:  AISSNLVHDPQETPSYPHRF-------GLPFKPVVEGSMPQYTTYNPLYDVSVGQYPPPFVEGAQQVPTNIIFLEPEQIVALPTVLSLG

XP_022157796.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111024415 [Momordica charantia]1.5e-2669.41Show/hide
Query:  ADPAISSNLVHDPQETPSYPHRFGLPFKPVVEGSMPQYTTYNPLYDVSVGQYPPPFVEGAQQVPTNIIFLEPEQIVALPTVLSLG
        ADPA SSN +H+PQETP YP  +G P +PV EG MPQYTTYNPLYDV +GQYP  FV+GAQQ+PTNIIF EPEQ+++ PTV +LG
Subjt:  ADPAISSNLVHDPQETPSYPHRFGLPFKPVVEGSMPQYTTYNPLYDVSVGQYPPPFVEGAQQVPTNIIFLEPEQIVALPTVLSLG

TrEMBL top hitse value%identityAlignment
A0A6J1D099 Ribonuclease H1.2e-1378.43Show/hide
Query:  MPQYTTYNPLYDVSVGQYPPPFVEGAQQVPTNIIFLEPEQIVALPTVLSLG
        MPQYTTYNPLYDV VGQY  PFV+GAQQ+PTNIIF EPEQ+++ PTVL+LG
Subjt:  MPQYTTYNPLYDVSVGQYPPPFVEGAQQVPTNIIFLEPEQIVALPTVLSLG

A0A6J1D7T3 uncharacterized protein LOC1110178121.7e-2366.28Show/hide
Query:  VADPAISSNLVHDPQETPSYPHRFGLPFKPVVEGSMPQYTTYNPLYDVSVGQYPPPFVEGAQQVPTNIIFLEPEQIVALPTVLSLG
        VADP  SSN VHD QE P YP  +  P + V EG M Q TTYNPLYD+ VGQYPPPFV+G QQ+PTNIIF EPEQ++  PTVL+LG
Subjt:  VADPAISSNLVHDPQETPSYPHRFGLPFKPVVEGSMPQYTTYNPLYDVSVGQYPPPFVEGAQQVPTNIIFLEPEQIVALPTVLSLG

A0A6J1DM29 LOW QUALITY PROTEIN: uncharacterized protein LOC1110222318.8e-1753.93Show/hide
Query:  AISSNLVHDPQETPSYPHRF-------GLPFKPVVEGSMPQYTTYNPLYDVSVGQYPPPFVEGAQQVPTNIIFLEPEQIVALPTVLSLG
        A +SN +H+P  TP +P  F       G  F+P+ EG M QYTTYNPLYD+  GQ+PPP V G  Q P  IIF EPEQ++A PTVL+LG
Subjt:  AISSNLVHDPQETPSYPHRF-------GLPFKPVVEGSMPQYTTYNPLYDVSVGQYPPPFVEGAQQVPTNIIFLEPEQIVALPTVLSLG

A0A6J1DZ90 Ribonuclease H7.2e-2769.41Show/hide
Query:  ADPAISSNLVHDPQETPSYPHRFGLPFKPVVEGSMPQYTTYNPLYDVSVGQYPPPFVEGAQQVPTNIIFLEPEQIVALPTVLSLG
        ADPA SSN +H+PQETP YP  +G P +PV EG MPQYTTYNPLYDV +GQYP  FV+GAQQ+PTNIIF EPEQ+++ PTV +LG
Subjt:  ADPAISSNLVHDPQETPSYPHRFGLPFKPVVEGSMPQYTTYNPLYDVSVGQYPPPFVEGAQQVPTNIIFLEPEQIVALPTVLSLG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGCGGATCCCGCTATATCTAGCAATCTCGTCCATGACCCGCAAGAAACCCCGTCTTATCCACATAGGTTTGGTCTACCTTTTAAGCCAGTAGTAGAGGGC
TCTATGCCGCAATATACAACGTATAACCCTCTATATGACGTTTCAGTTGGTCAGTACCCACCTCCATTTGTTGAGGGAGCTCAGCAAGTCCCAACCAACATCATA
TTTCTAGAGCCCGAGCAAATTGTGGCACTGCCTACAGTCCTTAGTCTCGGTTTTAACTCCTTCGAGCAGAGTCGGTCCCTCACCATTTATACCCAGAGCCCCGAC
CCTGCAGCATTGGCCCTCGACCATTTGTACCGAGGCCTTGAACTCTGCATCGACCCTCGACCATTTATACCCGAGGCATCGATGTCTTACAATCTATTGGCCCTT
GACCATTTATACCCAAGGCCCCAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGTTGCGGATCCCGCTATATCTAGCAATCTCGTCCATGACCCGCAAGAAACCCCGTCTTATCCACATAGGTTTGGTCTACCTTTTAAGCCAGTAGTAGAGGGC
TCTATGCCGCAATATACAACGTATAACCCTCTATATGACGTTTCAGTTGGTCAGTACCCACCTCCATTTGTTGAGGGAGCTCAGCAAGTCCCAACCAACATCATA
TTTCTAGAGCCCGAGCAAATTGTGGCACTGCCTACAGTCCTTAGTCTCGGTTTTAACTCCTTCGAGCAGAGTCGGTCCCTCACCATTTATACCCAGAGCCCCGAC
CCTGCAGCATTGGCCCTCGACCATTTGTACCGAGGCCTTGAACTCTGCATCGACCCTCGACCATTTATACCCGAGGCATCGATGTCTTACAATCTATTGGCCCTT
GACCATTTATACCCAAGGCCCCAATAG
Protein sequenceShow/hide protein sequence
MVADPAISSNLVHDPQETPSYPHRFGLPFKPVVEGSMPQYTTYNPLYDVSVGQYPPPFVEGAQQVPTNIIFLEPEQIVALPTVLSLGFNSFEQSRSLTIYTQSPD
PAALALDHLYRGLELCIDPRPFIPEASMSYNLLALDHLYPRPQ