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Moc04g23310 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g23310
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptionprotein PAF1 homolog
Genome locationchr4:16852107..16853012
RNA-Seq ExpressionMoc04g23310
SyntenyMoc04g23310
Gene Ontology termsGO:0009987 - cellular process (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022156604.1 protein PAF1 homolog [Momordica charantia]1.9e-1994.23Show/hide
Query:  MGPHGYVNFQQLPTLNIPQNSEFRAANPQQLPLMINPGMYQPFMFNPVPYSH
        MGPHGYVNFQQLPTLNIPQNSEFRAANPQQLP MINPGMYQPFMFNPVP  H
Subjt:  MGPHGYVNFQQLPTLNIPQNSEFRAANPQQLPLMINPGMYQPFMFNPVPYSH
XP_022156936.1 uncharacterized protein LOC111023763 [Momordica charantia]5.1e-1788.46Show/hide
Query:  MGPHGYVNFQQLPTLNIPQNSEFRAANPQQLPLMINPGMYQPFMFNPVPYSH
        M PHGYVNFQQLPTLNIPQNSEFRA NPQQLP MINPGMYQPFMFN VP  H
Subjt:  MGPHGYVNFQQLPTLNIPQNSEFRAANPQQLPLMINPGMYQPFMFNPVPYSH
XP_022158357.1 uncharacterized protein LOC111024860 [Momordica charantia]2.7e-1888.68Show/hide
Query:  MMGPHGYVNFQQLPTLNIPQNSEFRAANPQQLPLMINPGMYQPFMFNPVPYSH
        +M PHGYVNFQQLPTLNIPQNSEFRA NPQQLP MINPGMYQPFMFNPVP  H
Subjt:  MMGPHGYVNFQQLPTLNIPQNSEFRAANPQQLPLMINPGMYQPFMFNPVPYSH
XP_022158852.1 uncharacterized protein LOC111025316 [Momordica charantia]6.6e-1786.54Show/hide
Query:  MGPHGYVNFQQLPTLNIPQNSEFRAANPQQLPLMINPGMYQPFMFNPVPYSH
        M PHGYVNFQ LPTLNIPQNSEFRA +PQQLP MINPGMYQPFMFNPVP  H
Subjt:  MGPHGYVNFQQLPTLNIPQNSEFRAANPQQLPLMINPGMYQPFMFNPVPYSH
XP_022158979.1 uncharacterized protein LOC111025424 [Momordica charantia]3.9e-1786.79Show/hide
Query:  MMGPHGYVNFQQLPTLNIPQNSEFRAANPQQLPLMINPGMYQPFMFNPVPYSH
        +M PHGYVNFQQLPTLNIPQNSEFRA NPQQL  MINPGMYQPFMFNPVP  H
Subjt:  MMGPHGYVNFQQLPTLNIPQNSEFRAANPQQLPLMINPGMYQPFMFNPVPYSH
TrEMBL top hitse value%identityAlignment
A0A6J1DTZ1 protein PAF1 homolog9.0e-2094.23Show/hide
Query:  MGPHGYVNFQQLPTLNIPQNSEFRAANPQQLPLMINPGMYQPFMFNPVPYSH
        MGPHGYVNFQQLPTLNIPQNSEFRAANPQQLP MINPGMYQPFMFNPVP  H
Subjt:  MGPHGYVNFQQLPTLNIPQNSEFRAANPQQLPLMINPGMYQPFMFNPVPYSH
A0A6J1DWG3 uncharacterized protein LOC1110237632.5e-1788.46Show/hide
Query:  MGPHGYVNFQQLPTLNIPQNSEFRAANPQQLPLMINPGMYQPFMFNPVPYSH
        M PHGYVNFQQLPTLNIPQNSEFRA NPQQLP MINPGMYQPFMFN VP  H
Subjt:  MGPHGYVNFQQLPTLNIPQNSEFRAANPQQLPLMINPGMYQPFMFNPVPYSH
A0A6J1DX11 uncharacterized protein LOC1110248601.3e-1888.68Show/hide
Query:  MMGPHGYVNFQQLPTLNIPQNSEFRAANPQQLPLMINPGMYQPFMFNPVPYSH
        +M PHGYVNFQQLPTLNIPQNSEFRA NPQQLP MINPGMYQPFMFNPVP  H
Subjt:  MMGPHGYVNFQQLPTLNIPQNSEFRAANPQQLPLMINPGMYQPFMFNPVPYSH
A0A6J1DY94 uncharacterized protein LOC1110253163.2e-1786.54Show/hide
Query:  MGPHGYVNFQQLPTLNIPQNSEFRAANPQQLPLMINPGMYQPFMFNPVPYSH
        M PHGYVNFQ LPTLNIPQNSEFRA +PQQLP MINPGMYQPFMFNPVP  H
Subjt:  MGPHGYVNFQQLPTLNIPQNSEFRAANPQQLPLMINPGMYQPFMFNPVPYSH
A0A6J1E110 uncharacterized protein LOC1110254241.9e-1786.79Show/hide
Query:  MMGPHGYVNFQQLPTLNIPQNSEFRAANPQQLPLMINPGMYQPFMFNPVPYSH
        +M PHGYVNFQQLPTLNIPQNSEFRA NPQQL  MINPGMYQPFMFNPVP  H
Subjt:  MMGPHGYVNFQQLPTLNIPQNSEFRAANPQQLPLMINPGMYQPFMFNPVPYSH
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGGCCCACATGGTTATGTAAATTTTCAGCAGCTACCCACCCTTAATATACCTCAAAACAGTGAGTTTAGGGCTGCAAATCCTCAACAACTTCCTCTAATG
ATCAATCCGGGTATGTACCAACCGTTTATGTTTAACCCGGTTCCATATAGCCATAGTGCGTGGGAAGGAAATAAGGTTGATGCCACTCAGATCAACTACACCCCC
AACGTTGAGAATATCAGAGGTGCTGTGGGAAATAAGATGTTAGTGACTCCGACTCTAGAACAGCTCGGTGAGGCTCTAGAATGTGTTGGGAAGCCCTCTGCCACT
TGGGATTTGACTACTCATGGCCAGGATAGGGCACTGTTGGTTTATGCCATGCTAAAGGGCATAGATGTGAATTATGGAGAATTGATCAATACCAGTATCCATGAG
TGTGCCCACCGGACACGTGGTAAGCTTTATCACCCACGCTTGGTCACTTCTTTATGCTTGCGACAAGGTGTGCAGCTCCCTGCGGATCAAATTAAGAGAGATGCC
CCAGTTGTGGAAGAGAAGAATTTTCGGAGAATTATCGCCCATGCGCTACAAAGAAGGGCAGGTACTAGGACGTCTCCTACATCGGAGATCCGTCGTCTCCGAGAG
GAGAACCAACAGCTGCGAAATCAGGTTCGAGAAGTCGTGCAACATATCTACAACTTGAGGGCTTCATTGGATTTTGCGGTTTTACCTTCATGGCCTCCAGCGCTA
GCTGCTATCCTTGGTCATCCATCTTCCAGTACCGACACTGATCCTAGTCCACAACCTCCAACTTCATGA
mRNA sequenceShow/hide mRNA sequence
ATGATGGGCCCACATGGTTATGTAAATTTTCAGCAGCTACCCACCCTTAATATACCTCAAAACAGTGAGTTTAGGGCTGCAAATCCTCAACAACTTCCTCTAATG
ATCAATCCGGGTATGTACCAACCGTTTATGTTTAACCCGGTTCCATATAGCCATAGTGCGTGGGAAGGAAATAAGGTTGATGCCACTCAGATCAACTACACCCCC
AACGTTGAGAATATCAGAGGTGCTGTGGGAAATAAGATGTTAGTGACTCCGACTCTAGAACAGCTCGGTGAGGCTCTAGAATGTGTTGGGAAGCCCTCTGCCACT
TGGGATTTGACTACTCATGGCCAGGATAGGGCACTGTTGGTTTATGCCATGCTAAAGGGCATAGATGTGAATTATGGAGAATTGATCAATACCAGTATCCATGAG
TGTGCCCACCGGACACGTGGTAAGCTTTATCACCCACGCTTGGTCACTTCTTTATGCTTGCGACAAGGTGTGCAGCTCCCTGCGGATCAAATTAAGAGAGATGCC
CCAGTTGTGGAAGAGAAGAATTTTCGGAGAATTATCGCCCATGCGCTACAAAGAAGGGCAGGTACTAGGACGTCTCCTACATCGGAGATCCGTCGTCTCCGAGAG
GAGAACCAACAGCTGCGAAATCAGGTTCGAGAAGTCGTGCAACATATCTACAACTTGAGGGCTTCATTGGATTTTGCGGTTTTACCTTCATGGCCTCCAGCGCTA
GCTGCTATCCTTGGTCATCCATCTTCCAGTACCGACACTGATCCTAGTCCACAACCTCCAACTTCATGA
Protein sequenceShow/hide protein sequence
MMGPHGYVNFQQLPTLNIPQNSEFRAANPQQLPLMINPGMYQPFMFNPVPYSHSAWEGNKVDATQINYTPNVENIRGAVGNKMLVTPTLEQLGEALECVGKPSAT
WDLTTHGQDRALLVYAMLKGIDVNYGELINTSIHECAHRTRGKLYHPRLVTSLCLRQGVQLPADQIKRDAPVVEEKNFRRIIAHALQRRAGTRTSPTSEIRRLRE
ENQQLRNQVREVVQHIYNLRASLDFAVLPSWPPALAAILGHPSSSTDTDPSPQPPTS