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Moc04g23870 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g23870
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionCCHC-type domain-containing protein
Genome locationchr4:17245724..17248125
RNA-Seq ExpressionMoc04g23870
SyntenyMoc04g23870
Gene Ontology termsGO:0009059 - macromolecule biosynthetic process (biological process)
GO:0010467 - gene expression (biological process)
GO:0016310 - phosphorylation (biological process)
GO:0044267 - cellular protein metabolic process (biological process)
GO:0044271 - cellular nitrogen compound biosynthetic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0016301 - kinase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ESR55658.1 hypothetical protein CICLE_v10023471mg, partial [Citrus clementina]1.7e-3271.3Show/hide
Query:  SSGSSRGSKKSSMSDEDWEEMDLRAASAIRTGLAKNTLANVHGISTTKELWEKLEALYQTKGISNQLYQKEQFHTLRMEEGAKSLDHLSNLNSIIFELET
        S  S+ GS K+S+SDEDWEE+D RAASAIR  LAKN LANV  I T KELWEKLE LYQTK ISN+LY KEQFHTLRM EG K  DHLS LN I+ ELE 
Subjt:  SSGSSRGSKKSSMSDEDWEEMDLRAASAIRTGLAKNTLANVHGISTTKELWEKLEALYQTKGISNQLYQKEQFHTLRMEEGAKSLDHLSNLNSIIFELET

Query:  IEVKIDDEDKALRLI
        I VKI+D+DKALRL+
Subjt:  IEVKIDDEDKALRLI

KAF5463231.1 hypothetical protein F2P56_019161 [Juglans regia]4.4e-3361.97Show/hide
Query:  VEVDDFFPSSG----IKDLGPMESSSGSS---RGSKKSSMSDEDWEEMDLRAASAIRTGLAKNTLANVHGISTTKELWEKLEALYQTKGISNQLYQKEQF
        V+V D    SG    +K     E SS +S   +   +S MSDEDWE++DLRAASAIR  LAKN LAN+HGIST K+LWEKLE LYQTKG+SN++Y KEQF
Subjt:  VEVDDFFPSSG----IKDLGPMESSSGSS---RGSKKSSMSDEDWEEMDLRAASAIRTGLAKNTLANVHGISTTKELWEKLEALYQTKGISNQLYQKEQF

Query:  HTLRMEEGAKSLDHLSNLNSIIFELETIEVKIDDEDKALRLI
        HTL M EG    DHLS LN I+ ELE+I VKIDDED+ALRLI
Subjt:  HTLRMEEGAKSLDHLSNLNSIIFELETIEVKIDDEDKALRLI

KAF5758504.1 putative RNA-directed DNA polymerase [Helianthus annuus]1.7e-3262.59Show/hide
Query:  VEVDDFFPSSGIKDL---GPMESSSGSSRGSKKSSMSDEDWEEMDLRAASAIRTGLAKNTLANVHGISTTKELWEKLEALYQTKGISNQLYQKEQFHTLR
        V+V D    SG+       P   SS  S G+ K    DE+WE++DLRAASAIR  LAKN LANVHGIST K+LWEKLE LYQ KGISN+LY KEQFHTLR
Subjt:  VEVDDFFPSSGIKDL---GPMESSSGSSRGSKKSSMSDEDWEEMDLRAASAIRTGLAKNTLANVHGISTTKELWEKLEALYQTKGISNQLYQKEQFHTLR

Query:  MEEGAKSLDHLSNLNSIIFELETIEVKIDDEDKALRLIL
        M+   K  DHLS LN+I+ ELE I VK++DEDKALRLIL
Subjt:  MEEGAKSLDHLSNLNSIIFELETIEVKIDDEDKALRLIL

KAF7802225.1 cytochrome p450 [Senna tora]2.6e-3366.18Show/hide
Query:  VEVDDFFPSSGI-KDLGPMESSSGSSRGSKKSSMSDEDWEEMDLRAASAIRTGLAKNTLANVHGISTTKELWEKLEALYQTKGISNQLYQKEQFHTLRME
        V+V D    SG+ K L    SS  S +   +SSMSD DWEE+DLRAAS IR  LAKN LANV GIST KELW+KLE LYQ KGISN L  KEQFHTL M+
Subjt:  VEVDDFFPSSGI-KDLGPMESSSGSSRGSKKSSMSDEDWEEMDLRAASAIRTGLAKNTLANVHGISTTKELWEKLEALYQTKGISNQLYQKEQFHTLRME

Query:  EGAKSLDHLSNLNSIIFELETIEVKIDDEDKALRLI
        EG K  DHLS LNSI+ ELE I VKIDDEDK LRLI
Subjt:  EGAKSLDHLSNLNSIIFELETIEVKIDDEDKALRLI

XP_022139673.1 uncharacterized protein LOC111010521 [Momordica charantia]1.4e-4787.8Show/hide
Query:  DLGPMESSSGSSRGSKKSSMSDEDWEEMDLRAASAIRTGLAKNTLANVHGISTTKELWEKLEALYQTKGISNQLYQKEQFHTLRMEEGAKSLDHLSNLNS
        D GPMESS GSSRGSKKSSMS EDWEEMDLRAASAIRT LAKN LANVH IST KELWEKLEALYQ KGISN+LY KEQFHTL+MEEG K  DHLSNLNS
Subjt:  DLGPMESSSGSSRGSKKSSMSDEDWEEMDLRAASAIRTGLAKNTLANVHGISTTKELWEKLEALYQTKGISNQLYQKEQFHTLRMEEGAKSLDHLSNLNS

Query:  IIFELETIEVKIDDEDKALRLIL
        IIFELE IEVKIDDEDKALRLIL
Subjt:  IIFELETIEVKIDDEDKALRLIL

TrEMBL top hitse value%identityAlignment
A0A6A2WWQ1 Uncharacterized protein4.9e-3064.41Show/hide
Query:  MESSSGSSRGSKKSSMSDEDWEEMDLRAASAIRTGLAKNTLANVHGISTTKELWEKLEALYQTKGISNQLYQKEQFHTLRMEEGAKSLDHLSNLNSIIFE
        ++  S SS    KS MS+E+WEE+D+RAAS IR  LAKN LANV   S+TKELWEKLE +YQ K +SN+LY KE+FH L+MEEG K  DHLS LN I+ E
Subjt:  MESSSGSSRGSKKSSMSDEDWEEMDLRAASAIRTGLAKNTLANVHGISTTKELWEKLEALYQTKGISNQLYQKEQFHTLRMEEGAKSLDHLSNLNSIIFE

Query:  LETIEVKIDDEDKALRLI
        LE+I V+IDDEDKALRLI
Subjt:  LETIEVKIDDEDKALRLI

A0A6A2YS90 Transcription initiation factor IIA subunit 28.3e-3064.96Show/hide
Query:  ESSSGSSRGSKKSSMSDEDWEEMDLRAASAIRTGLAKNTLANVHGISTTKELWEKLEALYQTKGISNQLYQKEQFHTLRMEEGAKSLDHLSNLNSIIFEL
        +  S SS    KS MS+E+WEE+D+RAAS IR  LAKN LANV   S+TKELWEKLE +YQ K +SN+LY KE+FH L+MEEG K  DHLS LN I+ EL
Subjt:  ESSSGSSRGSKKSSMSDEDWEEMDLRAASAIRTGLAKNTLANVHGISTTKELWEKLEALYQTKGISNQLYQKEQFHTLRMEEGAKSLDHLSNLNSIIFEL

Query:  ETIEVKIDDEDKALRLI
        E+I V+IDDEDKALRLI
Subjt:  ETIEVKIDDEDKALRLI

A0A6A3BK59 CCHC-type domain-containing protein8.3e-3064.96Show/hide
Query:  ESSSGSSRGSKKSSMSDEDWEEMDLRAASAIRTGLAKNTLANVHGISTTKELWEKLEALYQTKGISNQLYQKEQFHTLRMEEGAKSLDHLSNLNSIIFEL
        +  S SS    KS MS+E+WEE+D+RAAS IR  LAKN LANV   S+TKELWEKLE +YQ K +SN+LY KE+FH L+MEEG K  DHLS LN I+ EL
Subjt:  ESSSGSSRGSKKSSMSDEDWEEMDLRAASAIRTGLAKNTLANVHGISTTKELWEKLEALYQTKGISNQLYQKEQFHTLRMEEGAKSLDHLSNLNSIIFEL

Query:  ETIEVKIDDEDKALRLI
        E+I V+IDDEDKALRLI
Subjt:  ETIEVKIDDEDKALRLI

A0A6J1CG82 uncharacterized protein LOC1110105216.7e-4887.8Show/hide
Query:  DLGPMESSSGSSRGSKKSSMSDEDWEEMDLRAASAIRTGLAKNTLANVHGISTTKELWEKLEALYQTKGISNQLYQKEQFHTLRMEEGAKSLDHLSNLNS
        D GPMESS GSSRGSKKSSMS EDWEEMDLRAASAIRT LAKN LANVH IST KELWEKLEALYQ KGISN+LY KEQFHTL+MEEG K  DHLSNLNS
Subjt:  DLGPMESSSGSSRGSKKSSMSDEDWEEMDLRAASAIRTGLAKNTLANVHGISTTKELWEKLEALYQTKGISNQLYQKEQFHTLRMEEGAKSLDHLSNLNS

Query:  IIFELETIEVKIDDEDKALRLIL
        IIFELE IEVKIDDEDKALRLIL
Subjt:  IIFELETIEVKIDDEDKALRLIL

V4T614 Uncharacterized protein (Fragment)8.0e-3371.3Show/hide
Query:  SSGSSRGSKKSSMSDEDWEEMDLRAASAIRTGLAKNTLANVHGISTTKELWEKLEALYQTKGISNQLYQKEQFHTLRMEEGAKSLDHLSNLNSIIFELET
        S  S+ GS K+S+SDEDWEE+D RAASAIR  LAKN LANV  I T KELWEKLE LYQTK ISN+LY KEQFHTLRM EG K  DHLS LN I+ ELE 
Subjt:  SSGSSRGSKKSSMSDEDWEEMDLRAASAIRTGLAKNTLANVHGISTTKELWEKLEALYQTKGISNQLYQKEQFHTLRMEEGAKSLDHLSNLNSIIFELET

Query:  IEVKIDDEDKALRLI
        I VKI+D+DKALRL+
Subjt:  IEVKIDDEDKALRLI

SwissProt top hitse value%identityAlignment
P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-942.7e-1742.06Show/hide
Query:  KKSSMSDEDWEEMDLRAASAIRTGLAKNTLANVHGISTTKELWEKLEALYQTKGISNQLYQKEQFHTLRMEEGAKSLDHLSNLNSIIFELETIEVKIDDE
        K  +M  EDW ++D RAASAIR  L+ + + N+    T + +W +LE+LY +K ++N+LY K+Q + L M EG   L HL+  N +I +L  + VKI++E
Subjt:  KKSSMSDEDWEEMDLRAASAIRTGLAKNTLANVHGISTTKELWEKLEALYQTKGISNQLYQKEQFHTLRMEEGAKSLDHLSNLNSIIFELETIEVKIDDE

Query:  DKALRLI
        DKA+ L+
Subjt:  DKALRLI

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTAGGCGCCTAAGAGCTGCAGCTTCTGGGTCTTGGCTGTTCAGCTATAACACTTATGGGTTCGTAGTGTCGCAGTGGTGTAGTCTCAACCCTAGTTATTTT
CTGCTTATTCCTGCGGTAGAAGTGGATGATTTTTTCCCATCAAGTGGTATCAAAGATTTAGGTCCAATGGAGTCCAGCAGTGGTTCTAGCAGAGGTTCTAAGAAG
TCTAGCATGAGTGATGAAGATTGGGAGGAAATGGATTTGAGAGCTGCAAGCGCGATACGAACAGGTTTGGCTAAGAATACTCTTGCGAATGTGCATGGAATTTCG
ACAACCAAAGAACTTTGGGAGAAGCTCGAAGCGTTGTATCAGACAAAGGGCATCTCAAATCAGTTGTACCAGAAGGAGCAGTTTCACACGCTACGAATGGAGGAA
GGTGCAAAAAGTTTAGATCATCTGAGTAATCTCAATAGCATCATTTTTGAGCTGGAGACGATCGAAGTGAAGATAGATGATGAAGATAAAGCACTCAGGCTCATC
TTATGA
mRNA sequenceShow/hide mRNA sequence
ATGCCTAGGCGCCTAAGAGCTGCAGCTTCTGGGTCTTGGCTGTTCAGCTATAACACTTATGGGTTCGTAGTGTCGCAGTGGTGTAGTCTCAACCCTAGTTATTTT
CTGCTTATTCCTGCGGTAGAAGTGGATGATTTTTTCCCATCAAGTGGTATCAAAGATTTAGGTCCAATGGAGTCCAGCAGTGGTTCTAGCAGAGGTTCTAAGAAG
TCTAGCATGAGTGATGAAGATTGGGAGGAAATGGATTTGAGAGCTGCAAGCGCGATACGAACAGGTTTGGCTAAGAATACTCTTGCGAATGTGCATGGAATTTCG
ACAACCAAAGAACTTTGGGAGAAGCTCGAAGCGTTGTATCAGACAAAGGGCATCTCAAATCAGTTGTACCAGAAGGAGCAGTTTCACACGCTACGAATGGAGGAA
GGTGCAAAAAGTTTAGATCATCTGAGTAATCTCAATAGCATCATTTTTGAGCTGGAGACGATCGAAGTGAAGATAGATGATGAAGATAAAGCACTCAGGCTCATC
TTATGA
Protein sequenceShow/hide protein sequence
MPRRLRAAASGSWLFSYNTYGFVVSQWCSLNPSYFLLIPAVEVDDFFPSSGIKDLGPMESSSGSSRGSKKSSMSDEDWEEMDLRAASAIRTGLAKNTLANVHGIS
TTKELWEKLEALYQTKGISNQLYQKEQFHTLRMEEGAKSLDHLSNLNSIIFELETIEVKIDDEDKALRLIL