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Moc04g23930 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g23930
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrovirus-related Pol polyprotein from transposon 412 family
Genome locationchr4:17300150..17301881
RNA-Seq ExpressionMoc04g23930
SyntenyMoc04g23930
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXB93492.1 hypothetical protein L484_006967 [Morus notabilis]6.0e-1329.28Show/hide
Query:  SGAKDAEEEDDNEELQR--EPEYESFVDGAASERFEELSERNLLGERGFPTDSPMPNFVVRIVQKHEWQPFYAKPKPAIIQL------------------
        S + ++E+  +N E+++   PE E   D   ++R   + ER  +  RG P  S  P+F+  ++  H W  F   P  A +QL                  
Subjt:  SGAKDAEEEDDNEELQR--EPEYESFVDGAASERFEELSERNLLGERGFPTDSPMPNFVVRIVQKHEWQPFYAKPKPAIIQL------------------

Query:  ------EQLNKDLKCIGVDGARWQLSTRGAQTFLPAYLKPEVNVWHHLLKNKLMPTTHDASITKERVPLLFCIMEGVSINV
              +QL++ +  + V+G  W  +TRG+ TF    L+P   +W+H L+ +LMP++H   + KER  LL+C+M+G  +NV
Subjt:  ------EQLNKDLKCIGVDGARWQLSTRGAQTFLPAYLKPEVNVWHHLLKNKLMPTTHDASITKERVPLLFCIMEGVSINV

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]1.1e-0926.32Show/hide
Query:  FVDGAASERFE-ELSERNLLGERGFPTDS-----PMPNFVVRIVQKHEWQPFYAKPKPAIIQL-------------------------------------
        F   AA+ R+E  +  R L  E+GF  D+      +P F+ +++ +H W+ F A P+  I+ L                                     
Subjt:  FVDGAASERFE-ELSERNLLGERGFPTDS-----PMPNFVVRIVQKHEWQPFYAKPKPAIIQL-------------------------------------

Query:  ---------------EQLNKDLKCIGVDGARWQLSTRGAQTFLPAYLKPEVNVWHHLLKNKLMPTTHDASITKERVPLLFCIMEGVSINV
                       + L   L+ +   GA W +S +GA T + + L P   VW+H LK++L+PTTH  +++K+R+ LL  ++ G SINV
Subjt:  ---------------EQLNKDLKCIGVDGARWQLSTRGAQTFLPAYLKPEVNVWHHLLKNKLMPTTHDASITKERVPLLFCIMEGVSINV

PON62892.1 hypothetical protein PanWU01x14_135680 [Parasponia andersonii]4.7e-1046.38Show/hide
Query:  LKCIGVDGARWQLSTRGAQTFLPAYLKPEVNVWHHLLKNKLMPTTHDASITKERVPLLFCIMEGVSINV
        L+ + + GA W +S++GA T L + L P   VW+H LK++L+PTTH  +++KERV LL+ ++ G SINV
Subjt:  LKCIGVDGARWQLSTRGAQTFLPAYLKPEVNVWHHLLKNKLMPTTHDASITKERVPLLFCIMEGVSINV

PON70375.1 hypothetical protein PanWU01x14_080440 [Parasponia andersonii]1.9e-1128.57Show/hide
Query:  FVDGAASERFEE-LSERNLLGERGFPTDS----PMPNFVVRIVQKHEWQPFYAKPKPAIIQL--------------------------------------
        F   AA  R+EE +  R L  E+ F  D+      P F+  ++ +H WQ F A P+  I+ L                                      
Subjt:  FVDGAASERFEE-LSERNLLGERGFPTDS----PMPNFVVRIVQKHEWQPFYAKPKPAIIQL--------------------------------------

Query:  ---------EQLNKD-----LKCIGVDGARWQLSTRGAQTFLPAYLKPEVNVWHHLLKNKLMPTTHDASITKERVPLLFCIMEGVSINV
                 E + K      L+ + + GA W +S++GA T L + L P   VW+H LK++L+PTTH  +++KE V LL+ ++ G SINV
Subjt:  ---------EQLNKD-----LKCIGVDGARWQLSTRGAQTFLPAYLKPEVNVWHHLLKNKLMPTTHDASITKERVPLLFCIMEGVSINV

XP_022158487.1 protein TsetseEP-like [Momordica charantia]1.3e-1553.21Show/hide
Query:  EEVPIEEHPVEHEEVQPEERNEDEASTFSPETVQVVEEFVRTLLENEQVLMGFREWGFCKRDEPSGAKDAEEEDDNEELQREPEYESFVDGAASERFEEL
        EE+  EE PV++EEVQPEERNEDE   FSPETVQVVE+FV TL ENE+ LMGFREWGF  + E SGAK  +EE+D  +  +E E         S R  + 
Subjt:  EEVPIEEHPVEHEEVQPEERNEDEASTFSPETVQVVEEFVRTLLENEQVLMGFREWGFCKRDEPSGAKDAEEEDDNEELQREPEYESFVDGAASERFEEL

Query:  SERNLLGER
        S +   G++
Subjt:  SERNLLGER

TrEMBL top hitse value%identityAlignment
A0A2P5BCG4 Uncharacterized protein (Fragment)5.1e-1026.32Show/hide
Query:  FVDGAASERFE-ELSERNLLGERGFPTDS-----PMPNFVVRIVQKHEWQPFYAKPKPAIIQL-------------------------------------
        F   AA+ R+E  +  R L  E+GF  D+      +P F+ +++ +H W+ F A P+  I+ L                                     
Subjt:  FVDGAASERFE-ELSERNLLGERGFPTDS-----PMPNFVVRIVQKHEWQPFYAKPKPAIIQL-------------------------------------

Query:  ---------------EQLNKDLKCIGVDGARWQLSTRGAQTFLPAYLKPEVNVWHHLLKNKLMPTTHDASITKERVPLLFCIMEGVSINV
                       + L   L+ +   GA W +S +GA T + + L P   VW+H LK++L+PTTH  +++K+R+ LL  ++ G SINV
Subjt:  ---------------EQLNKDLKCIGVDGARWQLSTRGAQTFLPAYLKPEVNVWHHLLKNKLMPTTHDASITKERVPLLFCIMEGVSINV

A0A2P5CPE8 Uncharacterized protein2.3e-1046.38Show/hide
Query:  LKCIGVDGARWQLSTRGAQTFLPAYLKPEVNVWHHLLKNKLMPTTHDASITKERVPLLFCIMEGVSINV
        L+ + + GA W +S++GA T L + L P   VW+H LK++L+PTTH  +++KERV LL+ ++ G SINV
Subjt:  LKCIGVDGARWQLSTRGAQTFLPAYLKPEVNVWHHLLKNKLMPTTHDASITKERVPLLFCIMEGVSINV

A0A2P5DAQ2 Uncharacterized protein9.3e-1228.57Show/hide
Query:  FVDGAASERFEE-LSERNLLGERGFPTDS----PMPNFVVRIVQKHEWQPFYAKPKPAIIQL--------------------------------------
        F   AA  R+EE +  R L  E+ F  D+      P F+  ++ +H WQ F A P+  I+ L                                      
Subjt:  FVDGAASERFEE-LSERNLLGERGFPTDS----PMPNFVVRIVQKHEWQPFYAKPKPAIIQL--------------------------------------

Query:  ---------EQLNKD-----LKCIGVDGARWQLSTRGAQTFLPAYLKPEVNVWHHLLKNKLMPTTHDASITKERVPLLFCIMEGVSINV
                 E + K      L+ + + GA W +S++GA T L + L P   VW+H LK++L+PTTH  +++KE V LL+ ++ G SINV
Subjt:  ---------EQLNKD-----LKCIGVDGARWQLSTRGAQTFLPAYLKPEVNVWHHLLKNKLMPTTHDASITKERVPLLFCIMEGVSINV

A0A6J1DXC9 protein TsetseEP-like6.2e-1653.21Show/hide
Query:  EEVPIEEHPVEHEEVQPEERNEDEASTFSPETVQVVEEFVRTLLENEQVLMGFREWGFCKRDEPSGAKDAEEEDDNEELQREPEYESFVDGAASERFEEL
        EE+  EE PV++EEVQPEERNEDE   FSPETVQVVE+FV TL ENE+ LMGFREWGF  + E SGAK  +EE+D  +  +E E         S R  + 
Subjt:  EEVPIEEHPVEHEEVQPEERNEDEASTFSPETVQVVEEFVRTLLENEQVLMGFREWGFCKRDEPSGAKDAEEEDDNEELQREPEYESFVDGAASERFEEL

Query:  SERNLLGER
        S +   G++
Subjt:  SERNLLGER

W9S7D3 Uncharacterized protein2.9e-1329.28Show/hide
Query:  SGAKDAEEEDDNEELQR--EPEYESFVDGAASERFEELSERNLLGERGFPTDSPMPNFVVRIVQKHEWQPFYAKPKPAIIQL------------------
        S + ++E+  +N E+++   PE E   D   ++R   + ER  +  RG P  S  P+F+  ++  H W  F   P  A +QL                  
Subjt:  SGAKDAEEEDDNEELQR--EPEYESFVDGAASERFEELSERNLLGERGFPTDSPMPNFVVRIVQKHEWQPFYAKPKPAIIQL------------------

Query:  ------EQLNKDLKCIGVDGARWQLSTRGAQTFLPAYLKPEVNVWHHLLKNKLMPTTHDASITKERVPLLFCIMEGVSINV
              +QL++ +  + V+G  W  +TRG+ TF    L+P   +W+H L+ +LMP++H   + KER  LL+C+M+G  +NV
Subjt:  ------EQLNKDLKCIGVDGARWQLSTRGAQTFLPAYLKPEVNVWHHLLKNKLMPTTHDASITKERVPLLFCIMEGVSINV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTAGAGTAAAGATAAGAGCAATGAAAGGCAATAAGGAAGAAGTGCCCATAGAAGAGCATCCAGTGGAACACGAAGAAGTCCAGCCTGAGGAAAGGAACGAA
GATGAAGCTTCGACCTTCTCTCCTGAAACAGTGCAGGTGGTGGAAGAGTTTGTCCGAACTCTATTAGAGAATGAGCAGGTGCTTATGGGTTTCAGAGAATGGGGC
TTCTGCAAGCGAGATGAGCCAAGTGGAGCAAAGGATGCAGAGGAAGAAGACGACAATGAAGAGCTCCAGAGAGAGCCAGAGTACGAGAGCTTCGTTGATGGTGCA
GCATCCGAACGATTTGAGGAATTGAGCGAGAGAAACCTGCTGGGCGAGAGGGGCTTCCCAACTGACTCCCCAATGCCAAACTTTGTGGTTAGAATCGTCCAGAAG
CATGAGTGGCAACCTTTTTATGCCAAGCCCAAGCCTGCAATCATCCAGCTGGAGCAGCTCAATAAAGACCTGAAATGCATAGGAGTAGATGGAGCTAGATGGCAG
CTGTCCACAAGGGGAGCTCAAACCTTCCTCCCTGCCTACCTCAAGCCTGAAGTAAACGTATGGCACCATCTACTCAAGAACAAGCTCATGCCAACTACACATGAT
GCCTCCATCACCAAGGAAAGAGTTCCACTCCTGTTCTGCATCATGGAAGGCGTTAGCATAAACGTAGACCCCAATGAGAAACTTCTCGCATCCATTCCCTTCATT
ACTAAATTTTCTGAGGAGCAGATTGTTGAAGAAGAAGATGATGCTGGCGCATCTCAGCTTGCGAGCAGCATTAGTGATGAAGAAGAAGGATAA
mRNA sequenceShow/hide mRNA sequence
ATGCCTAGAGTAAAGATAAGAGCAATGAAAGGCAATAAGGAAGAAGTGCCCATAGAAGAGCATCCAGTGGAACACGAAGAAGTCCAGCCTGAGGAAAGGAACGAA
GATGAAGCTTCGACCTTCTCTCCTGAAACAGTGCAGGTGGTGGAAGAGTTTGTCCGAACTCTATTAGAGAATGAGCAGGTGCTTATGGGTTTCAGAGAATGGGGC
TTCTGCAAGCGAGATGAGCCAAGTGGAGCAAAGGATGCAGAGGAAGAAGACGACAATGAAGAGCTCCAGAGAGAGCCAGAGTACGAGAGCTTCGTTGATGGTGCA
GCATCCGAACGATTTGAGGAATTGAGCGAGAGAAACCTGCTGGGCGAGAGGGGCTTCCCAACTGACTCCCCAATGCCAAACTTTGTGGTTAGAATCGTCCAGAAG
CATGAGTGGCAACCTTTTTATGCCAAGCCCAAGCCTGCAATCATCCAGCTGGAGCAGCTCAATAAAGACCTGAAATGCATAGGAGTAGATGGAGCTAGATGGCAG
CTGTCCACAAGGGGAGCTCAAACCTTCCTCCCTGCCTACCTCAAGCCTGAAGTAAACGTATGGCACCATCTACTCAAGAACAAGCTCATGCCAACTACACATGAT
GCCTCCATCACCAAGGAAAGAGTTCCACTCCTGTTCTGCATCATGGAAGGCGTTAGCATAAACGTAGACCCCAATGAGAAACTTCTCGCATCCATTCCCTTCATT
ACTAAATTTTCTGAGGAGCAGATTGTTGAAGAAGAAGATGATGCTGGCGCATCTCAGCTTGCGAGCAGCATTAGTGATGAAGAAGAAGGATAA
Protein sequenceShow/hide protein sequence
MPRVKIRAMKGNKEEVPIEEHPVEHEEVQPEERNEDEASTFSPETVQVVEEFVRTLLENEQVLMGFREWGFCKRDEPSGAKDAEEEDDNEELQREPEYESFVDGA
ASERFEELSERNLLGERGFPTDSPMPNFVVRIVQKHEWQPFYAKPKPAIIQLEQLNKDLKCIGVDGARWQLSTRGAQTFLPAYLKPEVNVWHHLLKNKLMPTTHD
ASITKERVPLLFCIMEGVSINVDPNEKLLASIPFITKFSEEQIVEEEDDAGASQLASSISDEEEG