; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc04g24130 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g24130
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionReverse transcriptase
Genome locationchr4:17433638..17435214
RNA-Seq ExpressionMoc04g24130
SyntenyMoc04g24130
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022150853.1 uncharacterized protein LOC111018898 [Momordica charantia]4.8e-2042.78Show/hide
Query:  FSNQGIGEARPITVTLQLADRSSTHPEGKID-------------DVLTVHCDRES----IGGCPQKGADNA---SSRSGSEILKDPEVIYLERTNSS---
        +   G+G  RP TVTLQL+DRS  +PEGKI              D + +  D +     I G P      A        + I +    I   R N+    
Subjt:  FSNQGIGEARPITVTLQLADRSSTHPEGKID-------------DVLTVHCDRES----IGGCPQKGADNA---SSRSGSEILKDPEVIYLERTNSS---

Query:  ---ERSVKCMHESLDLANREYKLLKPSIKQPPILELKALPQHLNYAYLGLSETLLIIIATDLFMEKEQMLLNVLKAHQTTIGWTIAD
            RS   +HESLDL +   K LKPSI++PP LELK L +HL YAYLG S TL III  DL  EKE  LL VL+ H+ TIGWTIAD
Subjt:  ---ERSVKCMHESLDLANREYKLLKPSIKQPPILELKALPQHLNYAYLGLSETLLIIIATDLFMEKEQMLLNVLKAHQTTIGWTIAD

XP_022156835.1 uncharacterized protein LOC111023669 [Momordica charantia]2.6e-3467.21Show/hide
Query:  MTHQSAVGASADKANVSHIQGISCYFYEGHHYYNNCSDNLESVYYLGNLQNSRNNPCSNTYNLGWRINPNFSWSGNHGGNNPGTSNALAYQQKRSYPPGF
        MT Q+ VGAS  KANVSHIQGISC F EG H+YNN  DN ESVYYLGN QN+  N  SNTYN GWR +PNFSWSGN GGNN GTSNA AYQQK SYPP F
Subjt:  MTHQSAVGASADKANVSHIQGISCYFYEGHHYYNNCSDNLESVYYLGNLQNSRNNPCSNTYNLGWRINPNFSWSGNHGGNNPGTSNALAYQQKRSYPPGF

Query:  SNQGIGEARPITVTLQLADRSS
        SNQG        VT+Q+    S
Subjt:  SNQGIGEARPITVTLQLADRSS

XP_022158611.1 uncharacterized protein LOC111025065 [Momordica charantia]8.8e-3066.97Show/hide
Query:  MTHQSAVGASADKANVSHIQGISCYFYEGHHYYNNCSDNLESVYYLGNLQNSRNNPCSNTYNLGWRINPNFSWSGNHGGNNPGTSNALAYQQKRSYPPGF
        M  QS+VGA    ANV+ IQGISC F EG H+YNNC  N ESVYYLGN QN+RNN  SNTYN GWR +PNFSWSG+ GG+N GTS+A A+Q K SYPPGF
Subjt:  MTHQSAVGASADKANVSHIQGISCYFYEGHHYYNNCSDNLESVYYLGNLQNSRNNPCSNTYNLGWRINPNFSWSGNHGGNNPGTSNALAYQQKRSYPPGF

Query:  SNQGIGEAR
         NQG   AR
Subjt:  SNQGIGEAR

XP_022158740.1 uncharacterized protein LOC111025203 [Momordica charantia]1.2e-2664.15Show/hide
Query:  MTHQSAVGASADKANVSHIQGISCYFYEGHHYYNNCSDNLESVYYLGNLQNSRNNPCSNTYNLGWRINPNFSWSGNHGGNNPGTSNALAYQQKRSYPPGF
        MT ++A G  A KANVSHIQGIS  F EG H+YN+C  N +SVYYLGN  N+ NNP SNTYN GW  +PNFSWS N G N+ GTSNA AYQQK +YPP  
Subjt:  MTHQSAVGASADKANVSHIQGISCYFYEGHHYYNNCSDNLESVYYLGNLQNSRNNPCSNTYNLGWRINPNFSWSGNHGGNNPGTSNALAYQQKRSYPPGF

Query:  SNQGIG
        +NQG G
Subjt:  SNQGIG

XP_030483376.1 uncharacterized protein LOC115699972 [Cannabis sativa]4.4e-2143.53Show/hide
Query:  FSNQGIGEARPITVTLQLADRSSTHPEGKIDDVLTVHCDRESIGGCPQKGADN-ASSRSGSEILKDPEVI----YLERTNSSE-------------RSVK
        F   GIGEARP TVTLQLADRS  HPEGKI+DVL +          P    D+  + +   E  +D + I     LE  +  E              + K
Subjt:  FSNQGIGEARPITVTLQLADRSSTHPEGKIDDVLTVHCDRESIGGCPQKGADN-ASSRSGSEILKDPEVI----YLERTNSSE-------------RSVK

Query:  CMHESLDLANREYKLLKPSIKQPPILELKALPQHLNYAYLGLSETLLIIIATDLFMEKEQMLLNVLKAHQ
           ESL+L    +K  KPSI++PP LELK LP HL YAYLG ++TL +IIA++L +E E  LL VLK H+
Subjt:  CMHESLDLANREYKLLKPSIKQPPILELKALPQHLNYAYLGLSETLLIIIATDLFMEKEQMLLNVLKAHQ

TrEMBL top hitse value%identityAlignment
A0A6J1DAJ9 uncharacterized protein LOC1110188982.3e-2042.78Show/hide
Query:  FSNQGIGEARPITVTLQLADRSSTHPEGKID-------------DVLTVHCDRES----IGGCPQKGADNA---SSRSGSEILKDPEVIYLERTNSS---
        +   G+G  RP TVTLQL+DRS  +PEGKI              D + +  D +     I G P      A        + I +    I   R N+    
Subjt:  FSNQGIGEARPITVTLQLADRSSTHPEGKID-------------DVLTVHCDRES----IGGCPQKGADNA---SSRSGSEILKDPEVIYLERTNSS---

Query:  ---ERSVKCMHESLDLANREYKLLKPSIKQPPILELKALPQHLNYAYLGLSETLLIIIATDLFMEKEQMLLNVLKAHQTTIGWTIAD
            RS   +HESLDL +   K LKPSI++PP LELK L +HL YAYLG S TL III  DL  EKE  LL VL+ H+ TIGWTIAD
Subjt:  ---ERSVKCMHESLDLANREYKLLKPSIKQPPILELKALPQHLNYAYLGLSETLLIIIATDLFMEKEQMLLNVLKAHQTTIGWTIAD

A0A6J1DRG1 uncharacterized protein LOC1110236691.3e-3467.21Show/hide
Query:  MTHQSAVGASADKANVSHIQGISCYFYEGHHYYNNCSDNLESVYYLGNLQNSRNNPCSNTYNLGWRINPNFSWSGNHGGNNPGTSNALAYQQKRSYPPGF
        MT Q+ VGAS  KANVSHIQGISC F EG H+YNN  DN ESVYYLGN QN+  N  SNTYN GWR +PNFSWSGN GGNN GTSNA AYQQK SYPP F
Subjt:  MTHQSAVGASADKANVSHIQGISCYFYEGHHYYNNCSDNLESVYYLGNLQNSRNNPCSNTYNLGWRINPNFSWSGNHGGNNPGTSNALAYQQKRSYPPGF

Query:  SNQGIGEARPITVTLQLADRSS
        SNQG        VT+Q+    S
Subjt:  SNQGIGEARPITVTLQLADRSS

A0A6J1DWH3 uncharacterized protein LOC1110250323.4e-1938.86Show/hide
Query:  GIGEARPITVTLQLADRSSTHPEGKIDDVLT---------------VHCDRE--SIGGCP------------------------------QKGADNASSR
        G+ + RP TVT QLADRS  +PEGKI+DVL                   D E   I G P                                 A+    +
Subjt:  GIGEARPITVTLQLADRSSTHPEGKIDDVLT---------------VHCDRE--SIGGCP------------------------------QKGADNASSR

Query:  SGSEI--LKD------PEVIYLERTNSSERSVKCMHESLDLANREYKLLKPSIKQPPILELKALPQHLNYAYLGLSETLLIIIATDLFMEKEQMLLNVLK
          SE+  + D       E++YL+      RS   +HESL+L + + K LKPS  +PP LELKALPQHL YAYL  S  L IIIA +L  EKE  LL VLK
Subjt:  SGSEI--LKD------PEVIYLERTNSSERSVKCMHESLDLANREYKLLKPSIKQPPILELKALPQHLNYAYLGLSETLLIIIATDLFMEKEQMLLNVLK

Query:  AHQTTIGWTIA
         H   IGWTIA
Subjt:  AHQTTIGWTIA

A0A6J1DWN2 uncharacterized protein LOC1110252035.7e-2764.15Show/hide
Query:  MTHQSAVGASADKANVSHIQGISCYFYEGHHYYNNCSDNLESVYYLGNLQNSRNNPCSNTYNLGWRINPNFSWSGNHGGNNPGTSNALAYQQKRSYPPGF
        MT ++A G  A KANVSHIQGIS  F EG H+YN+C  N +SVYYLGN  N+ NNP SNTYN GW  +PNFSWS N G N+ GTSNA AYQQK +YPP  
Subjt:  MTHQSAVGASADKANVSHIQGISCYFYEGHHYYNNCSDNLESVYYLGNLQNSRNNPCSNTYNLGWRINPNFSWSGNHGGNNPGTSNALAYQQKRSYPPGF

Query:  SNQGIG
        +NQG G
Subjt:  SNQGIG

A0A6J1E1F3 uncharacterized protein LOC1110250654.3e-3066.97Show/hide
Query:  MTHQSAVGASADKANVSHIQGISCYFYEGHHYYNNCSDNLESVYYLGNLQNSRNNPCSNTYNLGWRINPNFSWSGNHGGNNPGTSNALAYQQKRSYPPGF
        M  QS+VGA    ANV+ IQGISC F EG H+YNNC  N ESVYYLGN QN+RNN  SNTYN GWR +PNFSWSG+ GG+N GTS+A A+Q K SYPPGF
Subjt:  MTHQSAVGASADKANVSHIQGISCYFYEGHHYYNNCSDNLESVYYLGNLQNSRNNPCSNTYNLGWRINPNFSWSGNHGGNNPGTSNALAYQQKRSYPPGF

Query:  SNQGIGEAR
         NQG   AR
Subjt:  SNQGIGEAR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACACATCAAAGTGCAGTGGGAGCATCGGCCGACAAGGCAAATGTTAGCCACATCCAAGGGATTTCTTGTTATTTCTACGAAGGACATCATTATTATAATAAT
TGCTCTGACAATCTCGAGTCGGTGTACTACTTGGGGAATCTACAAAATAGTAGAAACAATCCATGCTCTAATACGTACAACTTGGGTTGGAGGATCAACCCTAAC
TTTAGTTGGAGTGGGAATCATGGAGGGAACAATCCTGGTACATCCAATGCTCTAGCATATCAACAAAAAAGGAGTTATCCGCCAGGCTTCTCGAATCAAGGAATA
GGAGAAGCAAGACCCATCACAGTCACCTTGCAGCTTGCTGATCGATCCAGCACACATCCAGAGGGAAAAATTGATGATGTCCTGACCGTTCATTGCGACAGGGAG
AGCATTGGTGGATGTCCACAAAAGGGAGCTGACAATGCGAGTTCAAGATCAGGAAGTGAAATTCTCAAAGATCCTGAGGTTATATACCTAGAAAGGACGAACAGC
AGTGAAAGGTCAGTTAAGTGCATGCACGAGTCCCTAGACCTTGCAAATCGTGAATACAAACTGTTGAAGCCATCTATAAAACAACCGCCAATCTTGGAGCTTAAG
GCATTGCCACAACATTTGAACTATGCCTACTTAGGTTTGTCAGAGACATTGCTAATCATCATAGCAACAGACCTGTTTATGGAGAAGGAGCAGATGTTGTTAAAT
GTGCTGAAAGCCCATCAGACAACAATTGGGTGGACCATTGCCGATAGATGTGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGACACATCAAAGTGCAGTGGGAGCATCGGCCGACAAGGCAAATGTTAGCCACATCCAAGGGATTTCTTGTTATTTCTACGAAGGACATCATTATTATAATAAT
TGCTCTGACAATCTCGAGTCGGTGTACTACTTGGGGAATCTACAAAATAGTAGAAACAATCCATGCTCTAATACGTACAACTTGGGTTGGAGGATCAACCCTAAC
TTTAGTTGGAGTGGGAATCATGGAGGGAACAATCCTGGTACATCCAATGCTCTAGCATATCAACAAAAAAGGAGTTATCCGCCAGGCTTCTCGAATCAAGGAATA
GGAGAAGCAAGACCCATCACAGTCACCTTGCAGCTTGCTGATCGATCCAGCACACATCCAGAGGGAAAAATTGATGATGTCCTGACCGTTCATTGCGACAGGGAG
AGCATTGGTGGATGTCCACAAAAGGGAGCTGACAATGCGAGTTCAAGATCAGGAAGTGAAATTCTCAAAGATCCTGAGGTTATATACCTAGAAAGGACGAACAGC
AGTGAAAGGTCAGTTAAGTGCATGCACGAGTCCCTAGACCTTGCAAATCGTGAATACAAACTGTTGAAGCCATCTATAAAACAACCGCCAATCTTGGAGCTTAAG
GCATTGCCACAACATTTGAACTATGCCTACTTAGGTTTGTCAGAGACATTGCTAATCATCATAGCAACAGACCTGTTTATGGAGAAGGAGCAGATGTTGTTAAAT
GTGCTGAAAGCCCATCAGACAACAATTGGGTGGACCATTGCCGATAGATGTGAATAA
Protein sequenceShow/hide protein sequence
MTHQSAVGASADKANVSHIQGISCYFYEGHHYYNNCSDNLESVYYLGNLQNSRNNPCSNTYNLGWRINPNFSWSGNHGGNNPGTSNALAYQQKRSYPPGFSNQGI
GEARPITVTLQLADRSSTHPEGKIDDVLTVHCDRESIGGCPQKGADNASSRSGSEILKDPEVIYLERTNSSERSVKCMHESLDLANREYKLLKPSIKQPPILELK
ALPQHLNYAYLGLSETLLIIIATDLFMEKEQMLLNVLKAHQTTIGWTIADRCE