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Moc04g24170 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g24170
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetroelement pol polyprotein-like
Genome locationchr4:17455664..17459034
RNA-Seq ExpressionMoc04g24170
SyntenyMoc04g24170
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022151321.1 uncharacterized protein LOC111019284 [Momordica charantia]3.7e-1557.58Show/hide
Query:  ASANGALLTKSYAKAFDILERISRNKHQWSKSRAASSTNSKGLVADYVVADLNSKISRLTDIVMKKVTTSEAGVSKAKVNA--VQSALYRIVKVSTSLR
        ASANGALL+K YA+AFD  + IS NKHQWSKSR AS+  SK L  D VVADLNSKIS L DI+MK +T  +A VSKA   A  +++    I K++T L+
Subjt:  ASANGALLTKSYAKAFDILERISRNKHQWSKSRAASSTNSKGLVADYVVADLNSKISRLTDIVMKKVTTSEAGVSKAKVNA--VQSALYRIVKVSTSLR

XP_022155867.1 uncharacterized protein LOC111022881 [Momordica charantia]3.3e-1662.5Show/hide
Query:  FPFVKWEEASANGALLTKSYAKAFDILERISRNKHQWSKSRAASSTNSKGLVADYVVADLNSKISRLTDIVMKKVTTSEAGVSKAKVN
        FP  K  E   NG+LL+K YA+AFDILERI  NKHQWSKSRAAS   SKGLV + VVADLNSKIS+L DIVM+ ++ S+A  S   V+
Subjt:  FPFVKWEEASANGALLTKSYAKAFDILERISRNKHQWSKSRAASSTNSKGLVADYVVADLNSKISRLTDIVMKKVTTSEAGVSKAKVN

XP_022156835.1 uncharacterized protein LOC111023669 [Momordica charantia]3.3e-0848.28Show/hide
Query:  EASANGALLTKSYAKAFDILERISRNKHQWSKSRAASSTNSKGLVADYVVADLNSKISRLTDIVMKKVT---TSEAGVSKAKVNAVQ
        +AS NGALL K YA+AF+ILERIS N H WS  RA      KGL        LNSK+  LT++VM+ +T   T  A   KA V+ +Q
Subjt:  EASANGALLTKSYAKAFDILERISRNKHQWSKSRAASSTNSKGLVADYVVADLNSKISRLTDIVMKKVT---TSEAGVSKAKVNAVQ

XP_022158768.1 uncharacterized protein LOC111025234 [Momordica charantia]2.5e-1969.41Show/hide
Query:  EASANGALLTKSYAKAFDILERISRNKHQWSKSRAASSTNSKGLVADYVVADLNSKISRLTDIVMKKVTTSEAGVSKAKVNAVQS
        +AS+N ALL K YA+AFDILE ISRNKHQ SKSRA SST SKGL  D VVA+LNSKIS+L DI MK ++ S+AG SKAKVN++Q+
Subjt:  EASANGALLTKSYAKAFDILERISRNKHQWSKSRAASSTNSKGLVADYVVADLNSKISRLTDIVMKKVTTSEAGVSKAKVNAVQS

XP_022159060.1 uncharacterized protein LOC111025500 [Momordica charantia]1.5e-0837.58Show/hide
Query:  EASANGALLTKSYAKAFDILERISRNKHQWSKSRAASSTNSKGLVADYVVADLNSKISRLTDIVMKKVT-TSEAGVSKAKVNAVQSALYRIVKVSTSLRI
        +ASANGALL K YA+AF+ILERIS N   WS  RA     SKG         LN KI  LTD+VM+ +T  S  G S  K N     +  I  +S S  +
Subjt:  EASANGALLTKSYAKAFDILERISRNKHQWSKSRAASSTNSKGLVADYVVADLNSKISRLTDIVMKKVT-TSEAGVSKAKVNAVQSALYRIVKVSTSLRI

Query:  VQTILHQCFIWVTRNRIKIMCMGT-----------HTSKVGETILTLVEDETKQDTM
         +   + C      N   +  +G             T+  G TILTLV  E +++TM
Subjt:  VQTILHQCFIWVTRNRIKIMCMGT-----------HTSKVGETILTLVEDETKQDTM

TrEMBL top hitse value%identityAlignment
A0A6J1DEA2 uncharacterized protein LOC1110192841.8e-1557.58Show/hide
Query:  ASANGALLTKSYAKAFDILERISRNKHQWSKSRAASSTNSKGLVADYVVADLNSKISRLTDIVMKKVTTSEAGVSKAKVNA--VQSALYRIVKVSTSLR
        ASANGALL+K YA+AFD  + IS NKHQWSKSR AS+  SK L  D VVADLNSKIS L DI+MK +T  +A VSKA   A  +++    I K++T L+
Subjt:  ASANGALLTKSYAKAFDILERISRNKHQWSKSRAASSTNSKGLVADYVVADLNSKISRLTDIVMKKVTTSEAGVSKAKVNA--VQSALYRIVKVSTSLR

A0A6J1DQJ0 uncharacterized protein LOC1110228811.6e-1662.5Show/hide
Query:  FPFVKWEEASANGALLTKSYAKAFDILERISRNKHQWSKSRAASSTNSKGLVADYVVADLNSKISRLTDIVMKKVTTSEAGVSKAKVN
        FP  K  E   NG+LL+K YA+AFDILERI  NKHQWSKSRAAS   SKGLV + VVADLNSKIS+L DIVM+ ++ S+A  S   V+
Subjt:  FPFVKWEEASANGALLTKSYAKAFDILERISRNKHQWSKSRAASSTNSKGLVADYVVADLNSKISRLTDIVMKKVTTSEAGVSKAKVN

A0A6J1DRG1 uncharacterized protein LOC1110236691.6e-0848.28Show/hide
Query:  EASANGALLTKSYAKAFDILERISRNKHQWSKSRAASSTNSKGLVADYVVADLNSKISRLTDIVMKKVT---TSEAGVSKAKVNAVQ
        +AS NGALL K YA+AF+ILERIS N H WS  RA      KGL        LNSK+  LT++VM+ +T   T  A   KA V+ +Q
Subjt:  EASANGALLTKSYAKAFDILERISRNKHQWSKSRAASSTNSKGLVADYVVADLNSKISRLTDIVMKKVT---TSEAGVSKAKVNAVQ

A0A6J1DX14 uncharacterized protein LOC1110252341.2e-1969.41Show/hide
Query:  EASANGALLTKSYAKAFDILERISRNKHQWSKSRAASSTNSKGLVADYVVADLNSKISRLTDIVMKKVTTSEAGVSKAKVNAVQS
        +AS+N ALL K YA+AFDILE ISRNKHQ SKSRA SST SKGL  D VVA+LNSKIS+L DI MK ++ S+AG SKAKVN++Q+
Subjt:  EASANGALLTKSYAKAFDILERISRNKHQWSKSRAASSTNSKGLVADYVVADLNSKISRLTDIVMKKVTTSEAGVSKAKVNAVQS

A0A6J1DXK5 uncharacterized protein LOC1110255007.3e-0937.58Show/hide
Query:  EASANGALLTKSYAKAFDILERISRNKHQWSKSRAASSTNSKGLVADYVVADLNSKISRLTDIVMKKVT-TSEAGVSKAKVNAVQSALYRIVKVSTSLRI
        +ASANGALL K YA+AF+ILERIS N   WS  RA     SKG         LN KI  LTD+VM+ +T  S  G S  K N     +  I  +S S  +
Subjt:  EASANGALLTKSYAKAFDILERISRNKHQWSKSRAASSTNSKGLVADYVVADLNSKISRLTDIVMKKVT-TSEAGVSKAKVNAVQSALYRIVKVSTSLRI

Query:  VQTILHQCFIWVTRNRIKIMCMGT-----------HTSKVGETILTLVEDETKQDTM
         +   + C      N   +  +G             T+  G TILTLV  E +++TM
Subjt:  VQTILHQCFIWVTRNRIKIMCMGT-----------HTSKVGETILTLVEDETKQDTM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTGTAGGGCTGCCACGTGAAGCTCATCGGATGACAAATAAAGAGCTTGACTATCTTTGCATCGAACTTCCCATCAAGATTGGGTCTCTCTACCAGGAAAAA
CCTGTAGCTTCAGGGGTAGGATTCCCGGAGTGGGAGGGGAGAACGAGGGATGTGAAATTGCACAAAGGGTGGGGAACTGTGCCTTCCGTGTGTCTATCTTTTCTT
CAAAAGGCAGGGTCTTCTTCTGCCCAAGACTTGTCGATATCCCTTCATTCTAATTTCTTGGTTAGTGTGTTAGCTCACTTGAGGCTCAGACAGTCCTTGTTGAGT
GGCTTTTATTCTGTTAGCTGTAGTTTTCCCTTTGTGAAGTGGGAAGAAGCCTCAGCAAATGGGGCTTTATTGACAAAGTCGTATGCAAAAGCTTTTGACATCCTA
GAAAGAATTTCACGCAACAAGCATCAGTGGTCGAAATCCAGGGCTGCTTCTTCTACAAATTCGAAAGGTCTGGTGGCAGATTATGTAGTAGCAGACTTAAACTCA
AAGATCTCACGGTTGACTGATATAGTTATGAAAAAAGTAACTACAAGTGAGGCTGGAGTCTCCAAAGCTAAGGTGAACGCTGTGCAAAGTGCTCTCTACCGTATT
GTGAAGGTGAGCACCAGTTTGAGAATTGTCCAGACAATCCTGCATCAGTGTTTTATTTGGGTAACCCGCAACAGAATAAAAATCATGTGTATGGGAACACATACA
AGCAAAGTTGGAGAAACCATCCTAACTCTAGTTGAAGACGAAACCAAACAGGACACAATGCAAGAACAAGTAATGCTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTTGTAGGGCTGCCACGTGAAGCTCATCGGATGACAAATAAAGAGCTTGACTATCTTTGCATCGAACTTCCCATCAAGATTGGGTCTCTCTACCAGGAAAAA
CCTGTAGCTTCAGGGGTAGGATTCCCGGAGTGGGAGGGGAGAACGAGGGATGTGAAATTGCACAAAGGGTGGGGAACTGTGCCTTCCGTGTGTCTATCTTTTCTT
CAAAAGGCAGGGTCTTCTTCTGCCCAAGACTTGTCGATATCCCTTCATTCTAATTTCTTGGTTAGTGTGTTAGCTCACTTGAGGCTCAGACAGTCCTTGTTGAGT
GGCTTTTATTCTGTTAGCTGTAGTTTTCCCTTTGTGAAGTGGGAAGAAGCCTCAGCAAATGGGGCTTTATTGACAAAGTCGTATGCAAAAGCTTTTGACATCCTA
GAAAGAATTTCACGCAACAAGCATCAGTGGTCGAAATCCAGGGCTGCTTCTTCTACAAATTCGAAAGGTCTGGTGGCAGATTATGTAGTAGCAGACTTAAACTCA
AAGATCTCACGGTTGACTGATATAGTTATGAAAAAAGTAACTACAAGTGAGGCTGGAGTCTCCAAAGCTAAGGTGAACGCTGTGCAAAGTGCTCTCTACCGTATT
GTGAAGGTGAGCACCAGTTTGAGAATTGTCCAGACAATCCTGCATCAGTGTTTTATTTGGGTAACCCGCAACAGAATAAAAATCATGTGTATGGGAACACATACA
AGCAAAGTTGGAGAAACCATCCTAACTCTAGTTGAAGACGAAACCAAACAGGACACAATGCAAGAACAAGTAATGCTCTAG
Protein sequenceShow/hide protein sequence
MLVGLPREAHRMTNKELDYLCIELPIKIGSLYQEKPVASGVGFPEWEGRTRDVKLHKGWGTVPSVCLSFLQKAGSSSAQDLSISLHSNFLVSVLAHLRLRQSLLS
GFYSVSCSFPFVKWEEASANGALLTKSYAKAFDILERISRNKHQWSKSRAASSTNSKGLVADYVVADLNSKISRLTDIVMKKVTTSEAGVSKAKVNAVQSALYRI
VKVSTSLRIVQTILHQCFIWVTRNRIKIMCMGTHTSKVGETILTLVEDETKQDTMQEQVML