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Moc04g24210 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g24210
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr4:17482267..17482497
RNA-Seq ExpressionMoc04g24210
SyntenyMoc04g24210
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008233 - peptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061346.1 uncharacterized protein E6C27_scaffold749G00290 [Cucumis melo var. makuwa]8.8e-1559.72Show/hide
Query:  MSATKQLGKSHVDRLIEIEEQLLFLREIPDNLRYVESRLDEISTKADGIDAVNARIDGLAIRELMLRVETLE
        MS++   GK+  DRL+EIEEQ+L+L E+PD++RY+ESR+DEIS KAD IDAV  R++GL I+EL+ RV+ LE
Subjt:  MSATKQLGKSHVDRLIEIEEQLLFLREIPDNLRYVESRLDEISTKADGIDAVNARIDGLAIRELMLRVETLE

KAA0065910.1 senescence-specific cysteine protease sag39 [Cucumis melo var. makuwa]6.1e-1665.28Show/hide
Query:  MSATKQLGKSHVDRLIEIEEQLLFLREIPDNLRYVESRLDEISTKADGIDAVNARIDGLAIRELMLRVETLE
        MS+    GKS  DRL+EIEEQ+L+L E+PD++RY+ESRLDEIS K D IDAV  RI+GL I+EL+ RVETLE
Subjt:  MSATKQLGKSHVDRLIEIEEQLLFLREIPDNLRYVESRLDEISTKADGIDAVNARIDGLAIRELMLRVETLE

XP_022150099.1 uncharacterized protein LOC111018360 [Momordica charantia]1.5e-1970.67Show/hide
Query:  MSATKQLGKSHVDRLIEIEEQLLFLREIPDNLRYVESRLDEISTKADGIDAVNARIDGLAIRELMLRVETLEGKA
        MS TKQL KSHVDRL+EIEEQLL+LRE+PD LR +E+R+DE S K   IDAVNARIDGL I+++ +RVETLE KA
Subjt:  MSATKQLGKSHVDRLIEIEEQLLFLREIPDNLRYVESRLDEISTKADGIDAVNARIDGLAIRELMLRVETLEGKA

XP_022154605.1 uncharacterized protein LOC111021829 [Momordica charantia]9.1e-2069.33Show/hide
Query:  MSATKQLGKSHVDRLIEIEEQLLFLREIPDNLRYVESRLDEISTKADGIDAVNARIDGLAIRELMLRVETLEGKA
        MSATKQL KSHVDRL+EIEEQLL+LRE+PD+LR +E+R+DE S K   IDAVNAR+DGL I+++ +RVET E KA
Subjt:  MSATKQLGKSHVDRLIEIEEQLLFLREIPDNLRYVESRLDEISTKADGIDAVNARIDGLAIRELMLRVETLEGKA

XP_022155185.1 uncharacterized protein LOC111022320 [Momordica charantia]8.2e-2990.79Show/hide
Query:  MSATKQLGKSHVDRLIEIEEQLLFLREIPDNLRYVESRLDEISTKADGIDAVNARIDGLAIRELMLRVETLEGKAK
        MS TKQLGKSH+DRL+EIEE+LLFLREIPDNLRYVESRLDEISTKADGID VNARIDGLAIRELMLRVETLE K K
Subjt:  MSATKQLGKSHVDRLIEIEEQLLFLREIPDNLRYVESRLDEISTKADGIDAVNARIDGLAIRELMLRVETLEGKAK

TrEMBL top hitse value%identityAlignment
A0A5A7V4C9 Uncharacterized protein4.2e-1559.72Show/hide
Query:  MSATKQLGKSHVDRLIEIEEQLLFLREIPDNLRYVESRLDEISTKADGIDAVNARIDGLAIRELMLRVETLE
        MS++   GK+  DRL+EIEEQ+L+L E+PD++RY+ESR+DEIS KAD IDAV  R++GL I+EL+ RV+ LE
Subjt:  MSATKQLGKSHVDRLIEIEEQLLFLREIPDNLRYVESRLDEISTKADGIDAVNARIDGLAIRELMLRVETLE

A0A5A7VFC8 Senescence-specific cysteine protease sag392.9e-1665.28Show/hide
Query:  MSATKQLGKSHVDRLIEIEEQLLFLREIPDNLRYVESRLDEISTKADGIDAVNARIDGLAIRELMLRVETLE
        MS+    GKS  DRL+EIEEQ+L+L E+PD++RY+ESRLDEIS K D IDAV  RI+GL I+EL+ RVETLE
Subjt:  MSATKQLGKSHVDRLIEIEEQLLFLREIPDNLRYVESRLDEISTKADGIDAVNARIDGLAIRELMLRVETLE

A0A6J1D906 Reverse transcriptase7.5e-2070.67Show/hide
Query:  MSATKQLGKSHVDRLIEIEEQLLFLREIPDNLRYVESRLDEISTKADGIDAVNARIDGLAIRELMLRVETLEGKA
        MS TKQL KSHVDRL+EIEEQLL+LRE+PD LR +E+R+DE S K   IDAVNARIDGL I+++ +RVETLE KA
Subjt:  MSATKQLGKSHVDRLIEIEEQLLFLREIPDNLRYVESRLDEISTKADGIDAVNARIDGLAIRELMLRVETLEGKA

A0A6J1DK29 uncharacterized protein LOC1110218294.4e-2069.33Show/hide
Query:  MSATKQLGKSHVDRLIEIEEQLLFLREIPDNLRYVESRLDEISTKADGIDAVNARIDGLAIRELMLRVETLEGKA
        MSATKQL KSHVDRL+EIEEQLL+LRE+PD+LR +E+R+DE S K   IDAVNAR+DGL I+++ +RVET E KA
Subjt:  MSATKQLGKSHVDRLIEIEEQLLFLREIPDNLRYVESRLDEISTKADGIDAVNARIDGLAIRELMLRVETLEGKA

A0A6J1DLQ6 uncharacterized protein LOC1110223204.0e-2990.79Show/hide
Query:  MSATKQLGKSHVDRLIEIEEQLLFLREIPDNLRYVESRLDEISTKADGIDAVNARIDGLAIRELMLRVETLEGKAK
        MS TKQLGKSH+DRL+EIEE+LLFLREIPDNLRYVESRLDEISTKADGID VNARIDGLAIRELMLRVETLE K K
Subjt:  MSATKQLGKSHVDRLIEIEEQLLFLREIPDNLRYVESRLDEISTKADGIDAVNARIDGLAIRELMLRVETLEGKAK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCGCGACAAAACAGTTGGGCAAGTCCCACGTTGACAGACTCATCGAGATCGAAGAACAACTGTTGTTCTTGAGGGAAATCCCTGATAACCTTAGATATGTG
GAATCTCGGCTGGATGAGATCTCCACCAAAGCTGACGGAATTGATGCCGTGAATGCCCGCATAGATGGGCTTGCTATACGTGAGTTAATGCTTCGGGTTGAGACC
CTTGAAGGCAAGGCTAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCCGCGACAAAACAGTTGGGCAAGTCCCACGTTGACAGACTCATCGAGATCGAAGAACAACTGTTGTTCTTGAGGGAAATCCCTGATAACCTTAGATATGTG
GAATCTCGGCTGGATGAGATCTCCACCAAAGCTGACGGAATTGATGCCGTGAATGCCCGCATAGATGGGCTTGCTATACGTGAGTTAATGCTTCGGGTTGAGACC
CTTGAAGGCAAGGCTAAGTGA
Protein sequenceShow/hide protein sequence
MSATKQLGKSHVDRLIEIEEQLLFLREIPDNLRYVESRLDEISTKADGIDAVNARIDGLAIRELMLRVETLEGKAK