; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc04g24530 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g24530
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionUnknown protein
Genome locationchr4:17745846..17746298
RNA-Seq ExpressionMoc04g24530
SyntenyMoc04g24530
Gene Ontology termsNA
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022149029.1 uncharacterized protein LOC111017548 [Momordica charantia]3.5e-4777.21Show/hide
Query:  MDFLAASDAMKCRAFQIALERSARLWYRQLKLKSIDNYQQLCHMFINQFFARQLLKLPLSHLGTVKQWDNESLINYIAPFVDEHVKVVS------LIYFT
        MDFLAASDA+KCRAFQIALE S RLWY+QLK +SID+YQQL  +FINQF ARQLLKLP SHL TVKQ DNESL  YIA  +DEHVKVVS      ++YFT
Subjt:  MDFLAASDAMKCRAFQIALERSARLWYRQLKLKSIDNYQQLCHMFINQFFARQLLKLPLSHLGTVKQWDNESLINYIAPFVDEHVKVVS------LIYFT

Query:  TGLNDRNLTIEFGSRPHVSLNEMLARARQYNDGLEL
        TGLNDRNLTIEFGSRP  SLN+MLARARQY DGLEL
Subjt:  TGLNDRNLTIEFGSRPHVSLNEMLARARQYNDGLEL

XP_022152851.1 uncharacterized protein LOC111020475 [Momordica charantia]8.2e-5776.92Show/hide
Query:  MSSYDGFGDPVSYVEVFEGKMDFLAASDAMKCRAFQIALERSARLWYRQLKLKSIDNYQQLCHMFINQFFARQLLKLPLSHLGTVKQWDNESLINYIAPF
        MSSYDG GDP+SYVEVFEGKMDFLA SDAMKC AFQI LE S RLWYRQLKL+SID+YQQL  +FINQF  RQ LKLPLSHLGTVKQ DNES   YIA F
Subjt:  MSSYDGFGDPVSYVEVFEGKMDFLAASDAMKCRAFQIALERSARLWYRQLKLKSIDNYQQLCHMFINQFFARQLLKLPLSHLGTVKQWDNESLINYIAPF

Query:  VDEHVKVVS------LIYFTTGLNDRNLTIEFGSRPHVSLNEMLARARQYNDGLEL
        +DEHVKVVS      ++YFTTGLNDRNLTIEFGS     LNEM ARARQY DGLEL
Subjt:  VDEHVKVVS------LIYFTTGLNDRNLTIEFGSRPHVSLNEMLARARQYNDGLEL

XP_022156088.1 uncharacterized protein LOC111023060 [Momordica charantia]2.9e-3048.72Show/hide
Query:  MSSYDGFGDPVSYVEVFEGKMDFLAASDAMKCRAFQIALERSARLWYRQLKLKSIDNYQQLCHMFINQFFARQLLKLPLSHLGTVKQWDNESLINYIAPF
        M SYDG  DP  YVEVFEG MDF AA+DA+KCRAFQIAL  SARLWYR+L  +SI  Y QL   FI+QFF+R   +   +HL T++Q + ++L  YI  F
Subjt:  MSSYDGFGDPVSYVEVFEGKMDFLAASDAMKCRAFQIALERSARLWYRQLKLKSIDNYQQLCHMFINQFFARQLLKLPLSHLGTVKQWDNESLINYIAPF

Query:  VDEHVKVV------SLIYFTTGLNDRNLTIEFGSRPHVSLNEMLARARQYNDGLEL
         +E +KVV      S+ YF TGL D   T++ G     +  E+L   +++ DG EL
Subjt:  VDEHVKVV------SLIYFTTGLNDRNLTIEFGSRPHVSLNEMLARARQYNDGLEL

XP_022156542.1 uncharacterized protein LOC111023421 [Momordica charantia]4.2e-2948.37Show/hide
Query:  YDGFGDPVSYVEVFEGKMDFLAASDAMKCRAFQIALERSARLWYRQLKLKSIDNYQQLCHMFINQFFARQLLKLPLSHLGTVKQWDNESLINYIAPFVDE
        YDG  DP  YVEVFEG MDF AASDA+KCRAFQIAL  SARLWYR+L  +SI  Y QL   F+ QF +R   K   +HL T++Q + E+L  Y+  F +E
Subjt:  YDGFGDPVSYVEVFEGKMDFLAASDAMKCRAFQIALERSARLWYRQLKLKSIDNYQQLCHMFINQFFARQLLKLPLSHLGTVKQWDNESLINYIAPFVDE

Query:  HVKVV------SLIYFTTGLNDRNLTIEFGSRPHVSLNEMLARARQYNDGLEL
         +KV       ++ YF TGL D  LT++ G     +  E+L +A++  DG EL
Subjt:  HVKVV------SLIYFTTGLNDRNLTIEFGSRPHVSLNEMLARARQYNDGLEL

XP_022159250.1 uncharacterized protein LOC111025663 [Momordica charantia]1.0e-3048.08Show/hide
Query:  MSSYDGFGDPVSYVEVFEGKMDFLAASDAMKCRAFQIALERSARLWYRQLKLKSIDNYQQLCHMFINQFFARQLLKLPLSHLGTVKQWDNESLINYIAPF
        M  YDG  DP  YVEVFEG MDF AA+DA+KCRAFQIAL  SARLWYR+L  +SI  Y QL   FI+QF +R   +   +HL T++Q + E+L  Y+  F
Subjt:  MSSYDGFGDPVSYVEVFEGKMDFLAASDAMKCRAFQIALERSARLWYRQLKLKSIDNYQQLCHMFINQFFARQLLKLPLSHLGTVKQWDNESLINYIAPF

Query:  VDEHVKVV------SLIYFTTGLNDRNLTIEFGSRPHVSLNEMLARARQYNDGLEL
        ++E +KV       ++ YF TGL D NLT++ G     +  E+L +A++  DG EL
Subjt:  VDEHVKVV------SLIYFTTGLNDRNLTIEFGSRPHVSLNEMLARARQYNDGLEL

TrEMBL top hitse value%identityAlignment
A0A6J1D5T3 uncharacterized protein LOC1110175481.7e-4777.21Show/hide
Query:  MDFLAASDAMKCRAFQIALERSARLWYRQLKLKSIDNYQQLCHMFINQFFARQLLKLPLSHLGTVKQWDNESLINYIAPFVDEHVKVVS------LIYFT
        MDFLAASDA+KCRAFQIALE S RLWY+QLK +SID+YQQL  +FINQF ARQLLKLP SHL TVKQ DNESL  YIA  +DEHVKVVS      ++YFT
Subjt:  MDFLAASDAMKCRAFQIALERSARLWYRQLKLKSIDNYQQLCHMFINQFFARQLLKLPLSHLGTVKQWDNESLINYIAPFVDEHVKVVS------LIYFT

Query:  TGLNDRNLTIEFGSRPHVSLNEMLARARQYNDGLEL
        TGLNDRNLTIEFGSRP  SLN+MLARARQY DGLEL
Subjt:  TGLNDRNLTIEFGSRPHVSLNEMLARARQYNDGLEL

A0A6J1DIZ8 uncharacterized protein LOC1110204754.0e-5776.92Show/hide
Query:  MSSYDGFGDPVSYVEVFEGKMDFLAASDAMKCRAFQIALERSARLWYRQLKLKSIDNYQQLCHMFINQFFARQLLKLPLSHLGTVKQWDNESLINYIAPF
        MSSYDG GDP+SYVEVFEGKMDFLA SDAMKC AFQI LE S RLWYRQLKL+SID+YQQL  +FINQF  RQ LKLPLSHLGTVKQ DNES   YIA F
Subjt:  MSSYDGFGDPVSYVEVFEGKMDFLAASDAMKCRAFQIALERSARLWYRQLKLKSIDNYQQLCHMFINQFFARQLLKLPLSHLGTVKQWDNESLINYIAPF

Query:  VDEHVKVVS------LIYFTTGLNDRNLTIEFGSRPHVSLNEMLARARQYNDGLEL
        +DEHVKVVS      ++YFTTGLNDRNLTIEFGS     LNEM ARARQY DGLEL
Subjt:  VDEHVKVVS------LIYFTTGLNDRNLTIEFGSRPHVSLNEMLARARQYNDGLEL

A0A6J1DPN4 uncharacterized protein LOC1110230601.4e-3048.72Show/hide
Query:  MSSYDGFGDPVSYVEVFEGKMDFLAASDAMKCRAFQIALERSARLWYRQLKLKSIDNYQQLCHMFINQFFARQLLKLPLSHLGTVKQWDNESLINYIAPF
        M SYDG  DP  YVEVFEG MDF AA+DA+KCRAFQIAL  SARLWYR+L  +SI  Y QL   FI+QFF+R   +   +HL T++Q + ++L  YI  F
Subjt:  MSSYDGFGDPVSYVEVFEGKMDFLAASDAMKCRAFQIALERSARLWYRQLKLKSIDNYQQLCHMFINQFFARQLLKLPLSHLGTVKQWDNESLINYIAPF

Query:  VDEHVKVV------SLIYFTTGLNDRNLTIEFGSRPHVSLNEMLARARQYNDGLEL
         +E +KVV      S+ YF TGL D   T++ G     +  E+L   +++ DG EL
Subjt:  VDEHVKVV------SLIYFTTGLNDRNLTIEFGSRPHVSLNEMLARARQYNDGLEL

A0A6J1DS95 uncharacterized protein LOC1110234212.1e-2948.37Show/hide
Query:  YDGFGDPVSYVEVFEGKMDFLAASDAMKCRAFQIALERSARLWYRQLKLKSIDNYQQLCHMFINQFFARQLLKLPLSHLGTVKQWDNESLINYIAPFVDE
        YDG  DP  YVEVFEG MDF AASDA+KCRAFQIAL  SARLWYR+L  +SI  Y QL   F+ QF +R   K   +HL T++Q + E+L  Y+  F +E
Subjt:  YDGFGDPVSYVEVFEGKMDFLAASDAMKCRAFQIALERSARLWYRQLKLKSIDNYQQLCHMFINQFFARQLLKLPLSHLGTVKQWDNESLINYIAPFVDE

Query:  HVKVV------SLIYFTTGLNDRNLTIEFGSRPHVSLNEMLARARQYNDGLEL
         +KV       ++ YF TGL D  LT++ G     +  E+L +A++  DG EL
Subjt:  HVKVV------SLIYFTTGLNDRNLTIEFGSRPHVSLNEMLARARQYNDGLEL

A0A6J1DY58 uncharacterized protein LOC1110256634.9e-3148.08Show/hide
Query:  MSSYDGFGDPVSYVEVFEGKMDFLAASDAMKCRAFQIALERSARLWYRQLKLKSIDNYQQLCHMFINQFFARQLLKLPLSHLGTVKQWDNESLINYIAPF
        M  YDG  DP  YVEVFEG MDF AA+DA+KCRAFQIAL  SARLWYR+L  +SI  Y QL   FI+QF +R   +   +HL T++Q + E+L  Y+  F
Subjt:  MSSYDGFGDPVSYVEVFEGKMDFLAASDAMKCRAFQIALERSARLWYRQLKLKSIDNYQQLCHMFINQFFARQLLKLPLSHLGTVKQWDNESLINYIAPF

Query:  VDEHVKVV------SLIYFTTGLNDRNLTIEFGSRPHVSLNEMLARARQYNDGLEL
        ++E +KV       ++ YF TGL D NLT++ G     +  E+L +A++  DG EL
Subjt:  VDEHVKVV------SLIYFTTGLNDRNLTIEFGSRPHVSLNEMLARARQYNDGLEL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCTCGTATGACGGATTCGGAGATCCTGTTTCTTACGTAGAGGTTTTCGAAGGAAAAATGGATTTCCTAGCTGCCAGTGATGCAATGAAGTGTCGTGCATTCCAGAT
TGCACTGGAAAGGTCAGCACGACTTTGGTATCGACAGTTGAAGCTGAAGTCTATCGACAATTATCAGCAGCTCTGTCACATGTTCATCAACCAGTTCTTCGCTCGACAGT
TGTTGAAGCTGCCTCTCTCTCACCTCGGAACAGTGAAGCAATGGGATAATGAGTCCCTTATTAATTATATAGCTCCATTTGTGGACGAGCATGTGAAGGTGGTCAGCTTG
ATATACTTCACGACGGGATTGAACGATCGCAATCTGACTATAGAGTTCGGCAGTAGACCTCACGTCTCACTTAACGAGATGCTTGCTCGAGCCCGACAATACAACGATGG
ATTAGAGCTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGCTCGTATGACGGATTCGGAGATCCTGTTTCTTACGTAGAGGTTTTCGAAGGAAAAATGGATTTCCTAGCTGCCAGTGATGCAATGAAGTGTCGTGCATTCCAGAT
TGCACTGGAAAGGTCAGCACGACTTTGGTATCGACAGTTGAAGCTGAAGTCTATCGACAATTATCAGCAGCTCTGTCACATGTTCATCAACCAGTTCTTCGCTCGACAGT
TGTTGAAGCTGCCTCTCTCTCACCTCGGAACAGTGAAGCAATGGGATAATGAGTCCCTTATTAATTATATAGCTCCATTTGTGGACGAGCATGTGAAGGTGGTCAGCTTG
ATATACTTCACGACGGGATTGAACGATCGCAATCTGACTATAGAGTTCGGCAGTAGACCTCACGTCTCACTTAACGAGATGCTTGCTCGAGCCCGACAATACAACGATGG
ATTAGAGCTCTAG
Protein sequenceShow/hide protein sequence
MSSYDGFGDPVSYVEVFEGKMDFLAASDAMKCRAFQIALERSARLWYRQLKLKSIDNYQQLCHMFINQFFARQLLKLPLSHLGTVKQWDNESLINYIAPFVDEHVKVVSL
IYFTTGLNDRNLTIEFGSRPHVSLNEMLARARQYNDGLEL