; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc04g24700 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g24700
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionGag/pol protein
Genome locationchr4:17867681..17870662
RNA-Seq ExpressionMoc04g24700
SyntenyMoc04g24700
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035879.1 gag/pol protein [Cucumis melo var. makuwa]3.1e-5853.45Show/hide
Query:  IIIDDLRFVLQEECSQASAPNANVTVRNAYDHWIKANDKAKVYILASISDVFAKKHENMGSSFDLYGF--ESPTQYAYHFGDEIQWGAGNITTQDGI---
        +IIDDLRFVL EEC Q  A NA  TVR  Y+ W KAN+KA+ YILAS+S+V AKKHE+M ++ ++     E   Q +Y    +      N    +G    
Subjt:  IIIDDLRFVLQEECSQASAPNANVTVRNAYDHWIKANDKAKVYILASISDVFAKKHENMGSSFDLYGF--ESPTQYAYHFGDEIQWGAGNITTQDGI---

Query:  -HSLSTLGARTRSQLDGPLQCGEDERCVIDEQSQVNFILESLPKSFLQFRSNAVMNKLEYTLTTLLNELQTYKSLMKNKRQGREANIATS-KRFHQGSTS
         H L+ +     ++++G          VIDE SQV+FILESLP+SFLQFRSNAVMNK+ YTLTTLLNELQT++SLMK K Q  EAN+ATS ++FH+GSTS
Subjt:  -HSLSTLGARTRSQLDGPLQCGEDERCVIDEQSQVNFILESLPKSFLQFRSNAVMNKLEYTLTTLLNELQTYKSLMKNKRQGREANIATS-KRFHQGSTS

Query:  GTKYVSSSSGSKTLKKKKVAGKESKPDYATAAAKKGRTNVADKGKCFHCNIDWHWKCNHPKYLVEKKKANEGKYD
        GTK + SSSG+K  KKKK  G+ +K +   AAAK  +   A KG CFHCN + HWK N PKYL EKKKA +GKYD
Subjt:  GTKYVSSSSGSKTLKKKKVAGKESKPDYATAAAKKGRTNVADKGKCFHCNIDWHWKCNHPKYLVEKKKANEGKYD

KAA0044955.1 gag/pol protein [Cucumis melo var. makuwa]5.2e-5853.45Show/hide
Query:  IIIDDLRFVLQEECSQASAPNANVTVRNAYDHWIKANDKAKVYILASISDVFAKKHENMGSSFDLYGF--ESPTQYAYHFGDEIQWGAGNITTQDGI---
        +IIDDLRFVL EEC Q  A NA  TVR  Y+ W KAN+KA+ YILAS+S+V AKKHE+M ++ ++     E   Q +Y    +      N    +G    
Subjt:  IIIDDLRFVLQEECSQASAPNANVTVRNAYDHWIKANDKAKVYILASISDVFAKKHENMGSSFDLYGF--ESPTQYAYHFGDEIQWGAGNITTQDGI---

Query:  -HSLSTLGARTRSQLDGPLQCGEDERCVIDEQSQVNFILESLPKSFLQFRSNAVMNKLEYTLTTLLNELQTYKSLMKNKRQGREANIATS-KRFHQGSTS
         H L+ +     ++++G          VIDE SQV+FILESLP+SFLQFRSNAVMNK+ YTLTTLLNELQT++SLMK K Q  EAN+ATS ++FH+GSTS
Subjt:  -HSLSTLGARTRSQLDGPLQCGEDERCVIDEQSQVNFILESLPKSFLQFRSNAVMNKLEYTLTTLLNELQTYKSLMKNKRQGREANIATS-KRFHQGSTS

Query:  GTKYVSSSSGSKTLKKKKVAGKESKPDYATAAAKKGRTNVADKGKCFHCNIDWHWKCNHPKYLVEKKKANEGKYD
        GTK + SSSG+K  KKKK  G+ +K +   AAAK  +   A KG CFHCN + HWK N PKYL EKKKA +GKYD
Subjt:  GTKYVSSSSGSKTLKKKKVAGKESKPDYATAAAKKGRTNVADKGKCFHCNIDWHWKCNHPKYLVEKKKANEGKYD

KAA0048404.1 gag/pol protein [Cucumis melo var. makuwa]5.2e-5853.45Show/hide
Query:  IIIDDLRFVLQEECSQASAPNANVTVRNAYDHWIKANDKAKVYILASISDVFAKKHENMGSSFDLYGF--ESPTQYAYHFGDEIQWGAGNITTQDGI---
        +IIDDLRFVL EEC Q  A NA  TVR  Y+ W KAN+KA+ YILAS+S+V AKKHE+M ++ ++     E   Q +Y    +      N    +G    
Subjt:  IIIDDLRFVLQEECSQASAPNANVTVRNAYDHWIKANDKAKVYILASISDVFAKKHENMGSSFDLYGF--ESPTQYAYHFGDEIQWGAGNITTQDGI---

Query:  -HSLSTLGARTRSQLDGPLQCGEDERCVIDEQSQVNFILESLPKSFLQFRSNAVMNKLEYTLTTLLNELQTYKSLMKNKRQGREANIATS-KRFHQGSTS
         H L+ +     ++++G          VIDE SQV+FILESLP+SFLQFRSNAVMNK+ YTLTTLLNELQT++SLMK K Q  EAN+ATS ++FH+GSTS
Subjt:  -HSLSTLGARTRSQLDGPLQCGEDERCVIDEQSQVNFILESLPKSFLQFRSNAVMNKLEYTLTTLLNELQTYKSLMKNKRQGREANIATS-KRFHQGSTS

Query:  GTKYVSSSSGSKTLKKKKVAGKESKPDYATAAAKKGRTNVADKGKCFHCNIDWHWKCNHPKYLVEKKKANEGKYD
        GTK + SSSG+K  KKKK  G+ +K +   AAAK  +   A KG CFHCN + HWK N PKYL EKKKA +GKYD
Subjt:  GTKYVSSSSGSKTLKKKKVAGKESKPDYATAAAKKGRTNVADKGKCFHCNIDWHWKCNHPKYLVEKKKANEGKYD

KAA0054490.1 gag/pol protein [Cucumis melo var. makuwa]5.2e-5853.45Show/hide
Query:  IIIDDLRFVLQEECSQASAPNANVTVRNAYDHWIKANDKAKVYILASISDVFAKKHENMGSSFDLYGF--ESPTQYAYHFGDEIQWGAGNITTQDGI---
        +IIDDLRFVL EEC Q  A NA  TVR  Y+ W KAN+KA+ YILAS+S+V AKKHE+M ++ ++     E   Q +Y    +      N    +G    
Subjt:  IIIDDLRFVLQEECSQASAPNANVTVRNAYDHWIKANDKAKVYILASISDVFAKKHENMGSSFDLYGF--ESPTQYAYHFGDEIQWGAGNITTQDGI---

Query:  -HSLSTLGARTRSQLDGPLQCGEDERCVIDEQSQVNFILESLPKSFLQFRSNAVMNKLEYTLTTLLNELQTYKSLMKNKRQGREANIATS-KRFHQGSTS
         H L+ +     ++++G          VIDE SQV+FILESLP+SFLQFRSNAVMNK+ YTLTTLLNELQT++SLMK K Q  EAN+ATS ++FH+GSTS
Subjt:  -HSLSTLGARTRSQLDGPLQCGEDERCVIDEQSQVNFILESLPKSFLQFRSNAVMNKLEYTLTTLLNELQTYKSLMKNKRQGREANIATS-KRFHQGSTS

Query:  GTKYVSSSSGSKTLKKKKVAGKESKPDYATAAAKKGRTNVADKGKCFHCNIDWHWKCNHPKYLVEKKKANEGKYD
        GTK + SSSG+K  KKKK  G+ +K +   AAAK  +   A KG CFHCN + HWK N PKYL EKKKA +GKYD
Subjt:  GTKYVSSSSGSKTLKKKKVAGKESKPDYATAAAKKGRTNVADKGKCFHCNIDWHWKCNHPKYLVEKKKANEGKYD

TYK14550.1 gag/pol protein [Cucumis melo var. makuwa]3.1e-5853.45Show/hide
Query:  IIIDDLRFVLQEECSQASAPNANVTVRNAYDHWIKANDKAKVYILASISDVFAKKHENMGSSFDLYGF--ESPTQYAYHFGDEIQWGAGNITTQDGI---
        +IIDDLRFVL EEC Q  A NA  TVR  Y+ W KAN+KA+ YILAS+S+V AKKHE+M ++ ++     E   Q +Y    +      N    +G    
Subjt:  IIIDDLRFVLQEECSQASAPNANVTVRNAYDHWIKANDKAKVYILASISDVFAKKHENMGSSFDLYGF--ESPTQYAYHFGDEIQWGAGNITTQDGI---

Query:  -HSLSTLGARTRSQLDGPLQCGEDERCVIDEQSQVNFILESLPKSFLQFRSNAVMNKLEYTLTTLLNELQTYKSLMKNKRQGREANIATS-KRFHQGSTS
         H L+ +     ++++G          VIDE SQV+FILESLP+SFLQFRSNAVMNK+ YTLTTLLNELQT++SLMK K Q  EAN+ATS ++FH+GSTS
Subjt:  -HSLSTLGARTRSQLDGPLQCGEDERCVIDEQSQVNFILESLPKSFLQFRSNAVMNKLEYTLTTLLNELQTYKSLMKNKRQGREANIATS-KRFHQGSTS

Query:  GTKYVSSSSGSKTLKKKKVAGKESKPDYATAAAKKGRTNVADKGKCFHCNIDWHWKCNHPKYLVEKKKANEGKYD
        GTK + SSSG+K  KKKK  G+ +K +   AAAK  +   A KG CFHCN + HWK N PKYL EKKKA +GKYD
Subjt:  GTKYVSSSSGSKTLKKKKVAGKESKPDYATAAAKKGRTNVADKGKCFHCNIDWHWKCNHPKYLVEKKKANEGKYD

TrEMBL top hitse value%identityAlignment
A0A5A7SMH8 Gag/pol protein2.5e-5853.45Show/hide
Query:  IIIDDLRFVLQEECSQASAPNANVTVRNAYDHWIKANDKAKVYILASISDVFAKKHENMGSSFDLYGF--ESPTQYAYHFGDEIQWGAGNITTQDGI---
        +IIDDLRFVL EEC Q  A NA  TVR  Y+ W KAN+KA+ YILAS+S+V AKKHE+M ++ ++     E   Q +Y    +      N    +G    
Subjt:  IIIDDLRFVLQEECSQASAPNANVTVRNAYDHWIKANDKAKVYILASISDVFAKKHENMGSSFDLYGF--ESPTQYAYHFGDEIQWGAGNITTQDGI---

Query:  -HSLSTLGARTRSQLDGPLQCGEDERCVIDEQSQVNFILESLPKSFLQFRSNAVMNKLEYTLTTLLNELQTYKSLMKNKRQGREANIATS-KRFHQGSTS
         H L+ +     ++++G          VIDE SQV+FILESLP+SFLQFRSNAVMNK+ YTLTTLLNELQT++SLMK K Q  EAN+ATS ++FH+GSTS
Subjt:  -HSLSTLGARTRSQLDGPLQCGEDERCVIDEQSQVNFILESLPKSFLQFRSNAVMNKLEYTLTTLLNELQTYKSLMKNKRQGREANIATS-KRFHQGSTS

Query:  GTKYVSSSSGSKTLKKKKVAGKESKPDYATAAAKKGRTNVADKGKCFHCNIDWHWKCNHPKYLVEKKKANEGKYD
        GTK + SSSG+K  KKKK  G+ +K +   AAAK  +   A KG CFHCN + HWK N PKYL EKKKA +GKYD
Subjt:  GTKYVSSSSGSKTLKKKKVAGKESKPDYATAAAKKGRTNVADKGKCFHCNIDWHWKCNHPKYLVEKKKANEGKYD

A0A5A7TU93 Gag/pol protein2.5e-5853.45Show/hide
Query:  IIIDDLRFVLQEECSQASAPNANVTVRNAYDHWIKANDKAKVYILASISDVFAKKHENMGSSFDLYGF--ESPTQYAYHFGDEIQWGAGNITTQDGI---
        +IIDDLRFVL EEC Q  A NA  TVR  Y+ W KAN+KA+ YILAS+S+V AKKHE+M ++ ++     E   Q +Y    +      N    +G    
Subjt:  IIIDDLRFVLQEECSQASAPNANVTVRNAYDHWIKANDKAKVYILASISDVFAKKHENMGSSFDLYGF--ESPTQYAYHFGDEIQWGAGNITTQDGI---

Query:  -HSLSTLGARTRSQLDGPLQCGEDERCVIDEQSQVNFILESLPKSFLQFRSNAVMNKLEYTLTTLLNELQTYKSLMKNKRQGREANIATS-KRFHQGSTS
         H L+ +     ++++G          VIDE SQV+FILESLP+SFLQFRSNAVMNK+ YTLTTLLNELQT++SLMK K Q  EAN+ATS ++FH+GSTS
Subjt:  -HSLSTLGARTRSQLDGPLQCGEDERCVIDEQSQVNFILESLPKSFLQFRSNAVMNKLEYTLTTLLNELQTYKSLMKNKRQGREANIATS-KRFHQGSTS

Query:  GTKYVSSSSGSKTLKKKKVAGKESKPDYATAAAKKGRTNVADKGKCFHCNIDWHWKCNHPKYLVEKKKANEGKYD
        GTK + SSSG+K  KKKK  G+ +K +   AAAK  +   A KG CFHCN + HWK N PKYL EKKKA +GKYD
Subjt:  GTKYVSSSSGSKTLKKKKVAGKESKPDYATAAAKKGRTNVADKGKCFHCNIDWHWKCNHPKYLVEKKKANEGKYD

A0A5A7TWB9 Gag/pol protein2.5e-5853.45Show/hide
Query:  IIIDDLRFVLQEECSQASAPNANVTVRNAYDHWIKANDKAKVYILASISDVFAKKHENMGSSFDLYGF--ESPTQYAYHFGDEIQWGAGNITTQDGI---
        +IIDDLRFVL EEC Q  A NA  TVR  Y+ W KAN+KA+ YILAS+S+V AKKHE+M ++ ++     E   Q +Y    +      N    +G    
Subjt:  IIIDDLRFVLQEECSQASAPNANVTVRNAYDHWIKANDKAKVYILASISDVFAKKHENMGSSFDLYGF--ESPTQYAYHFGDEIQWGAGNITTQDGI---

Query:  -HSLSTLGARTRSQLDGPLQCGEDERCVIDEQSQVNFILESLPKSFLQFRSNAVMNKLEYTLTTLLNELQTYKSLMKNKRQGREANIATS-KRFHQGSTS
         H L+ +     ++++G          VIDE SQV+FILESLP+SFLQFRSNAVMNK+ YTLTTLLNELQT++SLMK K Q  EAN+ATS ++FH+GSTS
Subjt:  -HSLSTLGARTRSQLDGPLQCGEDERCVIDEQSQVNFILESLPKSFLQFRSNAVMNKLEYTLTTLLNELQTYKSLMKNKRQGREANIATS-KRFHQGSTS

Query:  GTKYVSSSSGSKTLKKKKVAGKESKPDYATAAAKKGRTNVADKGKCFHCNIDWHWKCNHPKYLVEKKKANEGKYD
        GTK + SSSG+K  KKKK  G+ +K +   AAAK  +   A KG CFHCN + HWK N PKYL EKKKA +GKYD
Subjt:  GTKYVSSSSGSKTLKKKKVAGKESKPDYATAAAKKGRTNVADKGKCFHCNIDWHWKCNHPKYLVEKKKANEGKYD

A0A5D3CPJ6 Gag/pol protein1.5e-5853.45Show/hide
Query:  IIIDDLRFVLQEECSQASAPNANVTVRNAYDHWIKANDKAKVYILASISDVFAKKHENMGSSFDLYGF--ESPTQYAYHFGDEIQWGAGNITTQDGI---
        +IIDDLRFVL EEC Q  A NA  TVR  Y+ W KAN+KA+ YILAS+S+V AKKHE+M ++ ++     E   Q +Y    +      N    +G    
Subjt:  IIIDDLRFVLQEECSQASAPNANVTVRNAYDHWIKANDKAKVYILASISDVFAKKHENMGSSFDLYGF--ESPTQYAYHFGDEIQWGAGNITTQDGI---

Query:  -HSLSTLGARTRSQLDGPLQCGEDERCVIDEQSQVNFILESLPKSFLQFRSNAVMNKLEYTLTTLLNELQTYKSLMKNKRQGREANIATS-KRFHQGSTS
         H L+ +     ++++G          VIDE SQV+FILESLP+SFLQFRSNAVMNK+ YTLTTLLNELQT++SLMK K Q  EAN+ATS ++FH+GSTS
Subjt:  -HSLSTLGARTRSQLDGPLQCGEDERCVIDEQSQVNFILESLPKSFLQFRSNAVMNKLEYTLTTLLNELQTYKSLMKNKRQGREANIATS-KRFHQGSTS

Query:  GTKYVSSSSGSKTLKKKKVAGKESKPDYATAAAKKGRTNVADKGKCFHCNIDWHWKCNHPKYLVEKKKANEGKYD
        GTK + SSSG+K  KKKK  G+ +K +   AAAK  +   A KG CFHCN + HWK N PKYL EKKKA +GKYD
Subjt:  GTKYVSSSSGSKTLKKKKVAGKESKPDYATAAAKKGRTNVADKGKCFHCNIDWHWKCNHPKYLVEKKKANEGKYD

A0A5D3CSZ6 Gag/pol protein1.5e-5853.45Show/hide
Query:  IIIDDLRFVLQEECSQASAPNANVTVRNAYDHWIKANDKAKVYILASISDVFAKKHENMGSSFDLYGF--ESPTQYAYHFGDEIQWGAGNITTQDGI---
        +IIDDLRFVL EEC Q  A NA  TVR  Y+ W KAN+KA+ YILAS+S+V AKKHE+M ++ ++     E   Q +Y    +      N    +G    
Subjt:  IIIDDLRFVLQEECSQASAPNANVTVRNAYDHWIKANDKAKVYILASISDVFAKKHENMGSSFDLYGF--ESPTQYAYHFGDEIQWGAGNITTQDGI---

Query:  -HSLSTLGARTRSQLDGPLQCGEDERCVIDEQSQVNFILESLPKSFLQFRSNAVMNKLEYTLTTLLNELQTYKSLMKNKRQGREANIATS-KRFHQGSTS
         H L+ +     ++++G          VIDE SQV+FILESLP+SFLQFRSNAVMNK+ YTLTTLLNELQT++SLMK K Q  EAN+ATS ++FH+GSTS
Subjt:  -HSLSTLGARTRSQLDGPLQCGEDERCVIDEQSQVNFILESLPKSFLQFRSNAVMNKLEYTLTTLLNELQTYKSLMKNKRQGREANIATS-KRFHQGSTS

Query:  GTKYVSSSSGSKTLKKKKVAGKESKPDYATAAAKKGRTNVADKGKCFHCNIDWHWKCNHPKYLVEKKKANEGKYD
        GTK + SSSG+K  KKKK  G+ +K +   AAAK  +   A KG CFHCN + HWK N PKYL EKKKA +GKYD
Subjt:  GTKYVSSSSGSKTLKKKKVAGKESKPDYATAAAKKGRTNVADKGKCFHCNIDWHWKCNHPKYLVEKKKANEGKYD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAACCGAAACCAAGGCAAACACTAGAAATGGATAAGGGTTTCTTAGGTTTTGCTCCAATATTTTCCTTTCCTACGACTGGATTATTGGGGCGGACCTTCGAGTTACA
AATAGTGGAAATCATAATAGATGATCTTAGGTTCGTCTTGCAAGAAGAATGTTCTCAAGCTTCTGCGCCTAACGCCAATGTGACGGTGCGCAACGCCTATGACCACTGGA
TCAAGGCTAACGACAAGGCAAAGGTCTACATCTTGGCGAGCATATCAGATGTGTTTGCTAAGAAGCACGAGAACATGGGCTCGTCCTTTGATTTGTATGGGTTTGAGTCG
CCGACTCAATATGCCTACCATTTTGGGGACGAGATCCAATGGGGAGCTGGGAACATAACTACACAAGATGGAATTCACTCCTTGTCGACTTTAGGTGCGAGAACACGTTC
TCAACTTGATGGTCCACTTCAATGTGGCGAAGATGAACGGTGCGTCATAGACGAGCAGAGTCAGGTCAACTTCATTCTGGAATCTCTTCCAAAGAGTTTCCTACAATTTC
GCAGCAATGCGGTTATGAATAAGCTGGAGTACACTCTTACCACGCTCTTAAACGAGCTGCAGACCTACAAGTCACTTATGAAAAATAAGAGACAAGGGCGCGAGGCAAAC
ATTGCCACCTCCAAAAGGTTCCACCAAGGTTCGACCTCTGGAACTAAGTATGTGTCATCTTCTTCTGGAAGTAAGACTTTAAAGAAGAAAAAAGTTGCTGGTAAGGAGTC
CAAACCTGACTATGCTACTGCCGCTGCCAAGAAAGGCAGGACCAATGTTGCAGACAAGGGAAAGTGTTTCCACTGCAACATTGACTGGCATTGGAAATGCAACCACCCAA
AATACCTGGTCGAAAAGAAGAAAGCCAATGAAGGTAAATACGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAACCGAAACCAAGGCAAACACTAGAAATGGATAAGGGTTTCTTAGGTTTTGCTCCAATATTTTCCTTTCCTACGACTGGATTATTGGGGCGGACCTTCGAGTTACA
AATAGTGGAAATCATAATAGATGATCTTAGGTTCGTCTTGCAAGAAGAATGTTCTCAAGCTTCTGCGCCTAACGCCAATGTGACGGTGCGCAACGCCTATGACCACTGGA
TCAAGGCTAACGACAAGGCAAAGGTCTACATCTTGGCGAGCATATCAGATGTGTTTGCTAAGAAGCACGAGAACATGGGCTCGTCCTTTGATTTGTATGGGTTTGAGTCG
CCGACTCAATATGCCTACCATTTTGGGGACGAGATCCAATGGGGAGCTGGGAACATAACTACACAAGATGGAATTCACTCCTTGTCGACTTTAGGTGCGAGAACACGTTC
TCAACTTGATGGTCCACTTCAATGTGGCGAAGATGAACGGTGCGTCATAGACGAGCAGAGTCAGGTCAACTTCATTCTGGAATCTCTTCCAAAGAGTTTCCTACAATTTC
GCAGCAATGCGGTTATGAATAAGCTGGAGTACACTCTTACCACGCTCTTAAACGAGCTGCAGACCTACAAGTCACTTATGAAAAATAAGAGACAAGGGCGCGAGGCAAAC
ATTGCCACCTCCAAAAGGTTCCACCAAGGTTCGACCTCTGGAACTAAGTATGTGTCATCTTCTTCTGGAAGTAAGACTTTAAAGAAGAAAAAAGTTGCTGGTAAGGAGTC
CAAACCTGACTATGCTACTGCCGCTGCCAAGAAAGGCAGGACCAATGTTGCAGACAAGGGAAAGTGTTTCCACTGCAACATTGACTGGCATTGGAAATGCAACCACCCAA
AATACCTGGTCGAAAAGAAGAAAGCCAATGAAGGTAAATACGATTGA
Protein sequenceShow/hide protein sequence
MKPKPRQTLEMDKGFLGFAPIFSFPTTGLLGRTFELQIVEIIIDDLRFVLQEECSQASAPNANVTVRNAYDHWIKANDKAKVYILASISDVFAKKHENMGSSFDLYGFES
PTQYAYHFGDEIQWGAGNITTQDGIHSLSTLGARTRSQLDGPLQCGEDERCVIDEQSQVNFILESLPKSFLQFRSNAVMNKLEYTLTTLLNELQTYKSLMKNKRQGREAN
IATSKRFHQGSTSGTKYVSSSSGSKTLKKKKVAGKESKPDYATAAAKKGRTNVADKGKCFHCNIDWHWKCNHPKYLVEKKKANEGKYD