; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc04g24840 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g24840
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionPMD domain-containing protein
Genome locationchr4:17999779..18000459
RNA-Seq ExpressionMoc04g24840
SyntenyMoc04g24840
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034815.1 hypothetical protein E6C27_scaffold213G00490 [Cucumis melo var. makuwa]1.2e-2335.64Show/hide
Query:  PQLAQNKAPVANPEISHYSAENVISNFAQQAVMAMWEDIQEKIVRTPFENVADLKNEVHKIFGWISNTRTESSFS----TQLTKARQLEEMRTNLKKSLL
        P  A NK    NPE S +  E V+SNF Q+  + MWEDIQ+KI+RTPFE +  L+ E+  +   I     +   S        KARQL E  + +K++L 
Subjt:  PQLAQNKAPVANPEISHYSAENVISNFAQQAVMAMWEDIQEKIVRTPFENVADLKNEVHKIFGWISNTRTESSFS----TQLTKARQLEEMRTNLKKSLL

Query:  DEDHILGEQHALQERFNKLASRIDEHEAELKAMKTEAETLSCLISEKANDLDKHRLETSTIRDEISSMEYTTITNETNVRSLEGVRNALESARQELKEFK
            + G+   +QER  +L+    E E  L+++  E+E LS L  EKA  +++  LE +  +DE++++E T    E  + +L  V  ++E+AR+E K FK
Subjt:  DEDHILGEQHALQERFNKLASRIDEHEAELKAMKTEAETLSCLISEKANDLDKHRLETSTIRDEISSMEYTTITNETNVRSLEGVRNALESARQELKEFK

Query:  WK
        W+
Subjt:  WK

KAA0057576.1 hypothetical protein E6C27_scaffold497G00480 [Cucumis melo var. makuwa]5.6e-2433.48Show/hide
Query:  PQLAQNKAPVANPEISHYSAENVISNFAQQAVMAMWEDIQEKIVRTPFENVADLKNEVHKIFGWISNTR-----------------------TESSFSTQ
        P    NK  + NPE S +  E V+SNF Q+  + MWEDIQ+KI+RTPFE +  L+ ++  +F  I                            +SS+S Q
Subjt:  PQLAQNKAPVANPEISHYSAENVISNFAQQAVMAMWEDIQEKIVRTPFENVADLKNEVHKIFGWISNTR-----------------------TESSFSTQ

Query:  LT---KARQLEEMRTNLKKSLLDEDHILGEQHALQERFNKLASRIDEHEAELKAMKTEAETLSCLISEKANDLDKHRLETSTIRDEISSMEYTTITNETN
        L+   KARQL E  + +K++L     + G+   +QE+  +L+    E E  L+++  E+E LS L  EKA  +D+  LE + ++DE++++E T    E  
Subjt:  LT---KARQLEEMRTNLKKSLLDEDHILGEQHALQERFNKLASRIDEHEAELKAMKTEAETLSCLISEKANDLDKHRLETSTIRDEISSMEYTTITNETN

Query:  VRSLEGVRNALESARQELKEFKWK
        + ++  VR ++E+AR+E K FKW+
Subjt:  VRSLEGVRNALESARQELKEFKWK

KAA0060611.1 hypothetical protein E6C27_scaffold22G004890 [Cucumis melo var. makuwa]1.5e-2435.27Show/hide
Query:  PQLAQNKAPVANPEISHYSAENVISNFAQQAVMAMWEDIQEKIVRTPFENVADLKNEVHKIFGWISNTR-----------------------TESSFSTQ
        P  A N     NPE S +  E V+SNF Q+  + MWEDIQ+KI+RTPFE +  L+ E+  +   I                            +SS STQ
Subjt:  PQLAQNKAPVANPEISHYSAENVISNFAQQAVMAMWEDIQEKIVRTPFENVADLKNEVHKIFGWISNTR-----------------------TESSFSTQ

Query:  L---TKARQLEEMRTNLKKSLLDEDHILGEQHALQERFNKLASRIDEHEAELKAMKTEAETLSCLISEKANDLDKHRLETSTIRDEISSMEYTTITNETN
        L    KARQL E  + +K++L     + G+   +QER  +L+    E E  L+++  E+E LS L  EKA  +D+  LE + +RDE++++E T    E  
Subjt:  L---TKARQLEEMRTNLKKSLLDEDHILGEQHALQERFNKLASRIDEHEAELKAMKTEAETLSCLISEKANDLDKHRLETSTIRDEISSMEYTTITNETN

Query:  VRSLEGVRNALESARQELKEFKWK
        + +L  VR ++E+AR+E K FKW+
Subjt:  VRSLEGVRNALESARQELKEFKWK

KAA0065375.1 hypothetical protein E6C27_scaffold17G00370 [Cucumis melo var. makuwa]4.3e-2434.82Show/hide
Query:  PQLAQNKAPVANPEISHYSAENVISNFAQQAVMAMWEDIQEKIVRTPFENVADLKNEVHKIFGWISNTR-----------------------TESSFSTQ
        P  A NK    +PE S +  ENV+SNF Q+  + MWEDIQ+KI+RTPFE +  L+ E+  +   I                            +SS+S Q
Subjt:  PQLAQNKAPVANPEISHYSAENVISNFAQQAVMAMWEDIQEKIVRTPFENVADLKNEVHKIFGWISNTR-----------------------TESSFSTQ

Query:  L---TKARQLEEMRTNLKKSLLDEDHILGEQHALQERFNKLASRIDEHEAELKAMKTEAETLSCLISEKANDLDKHRLETSTIRDEISSMEYTTITNETN
        L    KARQL E  + +K+ L     + G+   +QER  +L+    E E  L+++  E+E LS L  EKA  +D+  LE + ++DE++++E T    E  
Subjt:  L---TKARQLEEMRTNLKKSLLDEDHILGEQHALQERFNKLASRIDEHEAELKAMKTEAETLSCLISEKANDLDKHRLETSTIRDEISSMEYTTITNETN

Query:  VRSLEGVRNALESARQELKEFKWK
        + +L  VR ++E+AR+E K FKW+
Subjt:  VRSLEGVRNALESARQELKEFKWK

TYK02261.1 hypothetical protein E5676_scaffold18G00620 [Cucumis melo var. makuwa]1.5e-2435.27Show/hide
Query:  PQLAQNKAPVANPEISHYSAENVISNFAQQAVMAMWEDIQEKIVRTPFENVADLKNEVHKIFGWISNTR-----------------------TESSFSTQ
        P  A N     NPE S +  E V+SNF Q+  + MWEDIQ+KI+RTPFE +  L+ E+  +   I                            +SS STQ
Subjt:  PQLAQNKAPVANPEISHYSAENVISNFAQQAVMAMWEDIQEKIVRTPFENVADLKNEVHKIFGWISNTR-----------------------TESSFSTQ

Query:  L---TKARQLEEMRTNLKKSLLDEDHILGEQHALQERFNKLASRIDEHEAELKAMKTEAETLSCLISEKANDLDKHRLETSTIRDEISSMEYTTITNETN
        L    KARQL E  + +K++L     + G+   +QER  +L+    E E  L+++  E+E LS L  EKA  +D+  LE + +RDE++++E T    E  
Subjt:  L---TKARQLEEMRTNLKKSLLDEDHILGEQHALQERFNKLASRIDEHEAELKAMKTEAETLSCLISEKANDLDKHRLETSTIRDEISSMEYTTITNETN

Query:  VRSLEGVRNALESARQELKEFKWK
        + +L  VR ++E+AR+E K FKW+
Subjt:  VRSLEGVRNALESARQELKEFKWK

TrEMBL top hitse value%identityAlignment
A0A5A7T019 PMD domain-containing protein6.0e-2435.64Show/hide
Query:  PQLAQNKAPVANPEISHYSAENVISNFAQQAVMAMWEDIQEKIVRTPFENVADLKNEVHKIFGWISNTRTESSFS----TQLTKARQLEEMRTNLKKSLL
        P  A NK    NPE S +  E V+SNF Q+  + MWEDIQ+KI+RTPFE +  L+ E+  +   I     +   S        KARQL E  + +K++L 
Subjt:  PQLAQNKAPVANPEISHYSAENVISNFAQQAVMAMWEDIQEKIVRTPFENVADLKNEVHKIFGWISNTRTESSFS----TQLTKARQLEEMRTNLKKSLL

Query:  DEDHILGEQHALQERFNKLASRIDEHEAELKAMKTEAETLSCLISEKANDLDKHRLETSTIRDEISSMEYTTITNETNVRSLEGVRNALESARQELKEFK
            + G+   +QER  +L+    E E  L+++  E+E LS L  EKA  +++  LE +  +DE++++E T    E  + +L  V  ++E+AR+E K FK
Subjt:  DEDHILGEQHALQERFNKLASRIDEHEAELKAMKTEAETLSCLISEKANDLDKHRLETSTIRDEISSMEYTTITNETNVRSLEGVRNALESARQELKEFK

Query:  WK
        W+
Subjt:  WK

A0A5A7UTW5 Uncharacterized protein2.7e-2433.48Show/hide
Query:  PQLAQNKAPVANPEISHYSAENVISNFAQQAVMAMWEDIQEKIVRTPFENVADLKNEVHKIFGWISNTR-----------------------TESSFSTQ
        P    NK  + NPE S +  E V+SNF Q+  + MWEDIQ+KI+RTPFE +  L+ ++  +F  I                            +SS+S Q
Subjt:  PQLAQNKAPVANPEISHYSAENVISNFAQQAVMAMWEDIQEKIVRTPFENVADLKNEVHKIFGWISNTR-----------------------TESSFSTQ

Query:  LT---KARQLEEMRTNLKKSLLDEDHILGEQHALQERFNKLASRIDEHEAELKAMKTEAETLSCLISEKANDLDKHRLETSTIRDEISSMEYTTITNETN
        L+   KARQL E  + +K++L     + G+   +QE+  +L+    E E  L+++  E+E LS L  EKA  +D+  LE + ++DE++++E T    E  
Subjt:  LT---KARQLEEMRTNLKKSLLDEDHILGEQHALQERFNKLASRIDEHEAELKAMKTEAETLSCLISEKANDLDKHRLETSTIRDEISSMEYTTITNETN

Query:  VRSLEGVRNALESARQELKEFKWK
        + ++  VR ++E+AR+E K FKW+
Subjt:  VRSLEGVRNALESARQELKEFKWK

A0A5A7V4F4 PMD domain-containing protein7.1e-2535.27Show/hide
Query:  PQLAQNKAPVANPEISHYSAENVISNFAQQAVMAMWEDIQEKIVRTPFENVADLKNEVHKIFGWISNTR-----------------------TESSFSTQ
        P  A N     NPE S +  E V+SNF Q+  + MWEDIQ+KI+RTPFE +  L+ E+  +   I                            +SS STQ
Subjt:  PQLAQNKAPVANPEISHYSAENVISNFAQQAVMAMWEDIQEKIVRTPFENVADLKNEVHKIFGWISNTR-----------------------TESSFSTQ

Query:  L---TKARQLEEMRTNLKKSLLDEDHILGEQHALQERFNKLASRIDEHEAELKAMKTEAETLSCLISEKANDLDKHRLETSTIRDEISSMEYTTITNETN
        L    KARQL E  + +K++L     + G+   +QER  +L+    E E  L+++  E+E LS L  EKA  +D+  LE + +RDE++++E T    E  
Subjt:  L---TKARQLEEMRTNLKKSLLDEDHILGEQHALQERFNKLASRIDEHEAELKAMKTEAETLSCLISEKANDLDKHRLETSTIRDEISSMEYTTITNETN

Query:  VRSLEGVRNALESARQELKEFKWK
        + +L  VR ++E+AR+E K FKW+
Subjt:  VRSLEGVRNALESARQELKEFKWK

A0A5A7VHW8 PMD domain-containing protein2.1e-2434.82Show/hide
Query:  PQLAQNKAPVANPEISHYSAENVISNFAQQAVMAMWEDIQEKIVRTPFENVADLKNEVHKIFGWISNTR-----------------------TESSFSTQ
        P  A NK    +PE S +  ENV+SNF Q+  + MWEDIQ+KI+RTPFE +  L+ E+  +   I                            +SS+S Q
Subjt:  PQLAQNKAPVANPEISHYSAENVISNFAQQAVMAMWEDIQEKIVRTPFENVADLKNEVHKIFGWISNTR-----------------------TESSFSTQ

Query:  L---TKARQLEEMRTNLKKSLLDEDHILGEQHALQERFNKLASRIDEHEAELKAMKTEAETLSCLISEKANDLDKHRLETSTIRDEISSMEYTTITNETN
        L    KARQL E  + +K+ L     + G+   +QER  +L+    E E  L+++  E+E LS L  EKA  +D+  LE + ++DE++++E T    E  
Subjt:  L---TKARQLEEMRTNLKKSLLDEDHILGEQHALQERFNKLASRIDEHEAELKAMKTEAETLSCLISEKANDLDKHRLETSTIRDEISSMEYTTITNETN

Query:  VRSLEGVRNALESARQELKEFKWK
        + +L  VR ++E+AR+E K FKW+
Subjt:  VRSLEGVRNALESARQELKEFKWK

A0A5D3BRA8 PMD domain-containing protein7.1e-2535.27Show/hide
Query:  PQLAQNKAPVANPEISHYSAENVISNFAQQAVMAMWEDIQEKIVRTPFENVADLKNEVHKIFGWISNTR-----------------------TESSFSTQ
        P  A N     NPE S +  E V+SNF Q+  + MWEDIQ+KI+RTPFE +  L+ E+  +   I                            +SS STQ
Subjt:  PQLAQNKAPVANPEISHYSAENVISNFAQQAVMAMWEDIQEKIVRTPFENVADLKNEVHKIFGWISNTR-----------------------TESSFSTQ

Query:  L---TKARQLEEMRTNLKKSLLDEDHILGEQHALQERFNKLASRIDEHEAELKAMKTEAETLSCLISEKANDLDKHRLETSTIRDEISSMEYTTITNETN
        L    KARQL E  + +K++L     + G+   +QER  +L+    E E  L+++  E+E LS L  EKA  +D+  LE + +RDE++++E T    E  
Subjt:  L---TKARQLEEMRTNLKKSLLDEDHILGEQHALQERFNKLASRIDEHEAELKAMKTEAETLSCLISEKANDLDKHRLETSTIRDEISSMEYTTITNETN

Query:  VRSLEGVRNALESARQELKEFKWK
        + +L  VR ++E+AR+E K FKW+
Subjt:  VRSLEGVRNALESARQELKEFKWK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCAATACTCCTCAACTAGCTCAGAATAAAGCACCGGTTGCAAACCCTGAGATCTCTCATTACTCTGCTGAAAATGTAATCTCTAATTTCGCCCAGCAAGCAGTTAT
GGCTATGTGGGAAGACATACAGGAGAAGATTGTTCGTACTCCCTTTGAGAATGTTGCTGATCTAAAAAATGAAGTACATAAAATATTCGGCTGGATCTCCAACACTCGAA
CAGAGTCCTCATTTTCTACTCAATTAACCAAGGCCCGTCAACTAGAAGAGATGAGAACTAATTTGAAGAAATCATTACTGGATGAAGATCACATACTCGGAGAGCAGCAT
GCGCTCCAAGAGCGATTCAATAAATTGGCCTCAAGAATCGATGAGCATGAGGCTGAGCTTAAAGCTATGAAGACTGAAGCTGAGACTCTTTCCTGTTTAATTTCTGAGAA
AGCAAATGATCTGGACAAACATAGGCTTGAAACCTCTACGATACGTGACGAGATAAGTAGTATGGAATACACCACTATTACCAATGAAACAAATGTGAGATCTCTCGAAG
GAGTTCGTAATGCTTTGGAAAGCGCACGCCAAGAGCTGAAAGAGTTCAAGTGGAAGCCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTCAATACTCCTCAACTAGCTCAGAATAAAGCACCGGTTGCAAACCCTGAGATCTCTCATTACTCTGCTGAAAATGTAATCTCTAATTTCGCCCAGCAAGCAGTTAT
GGCTATGTGGGAAGACATACAGGAGAAGATTGTTCGTACTCCCTTTGAGAATGTTGCTGATCTAAAAAATGAAGTACATAAAATATTCGGCTGGATCTCCAACACTCGAA
CAGAGTCCTCATTTTCTACTCAATTAACCAAGGCCCGTCAACTAGAAGAGATGAGAACTAATTTGAAGAAATCATTACTGGATGAAGATCACATACTCGGAGAGCAGCAT
GCGCTCCAAGAGCGATTCAATAAATTGGCCTCAAGAATCGATGAGCATGAGGCTGAGCTTAAAGCTATGAAGACTGAAGCTGAGACTCTTTCCTGTTTAATTTCTGAGAA
AGCAAATGATCTGGACAAACATAGGCTTGAAACCTCTACGATACGTGACGAGATAAGTAGTATGGAATACACCACTATTACCAATGAAACAAATGTGAGATCTCTCGAAG
GAGTTCGTAATGCTTTGGAAAGCGCACGCCAAGAGCTGAAAGAGTTCAAGTGGAAGCCCTGA
Protein sequenceShow/hide protein sequence
MVNTPQLAQNKAPVANPEISHYSAENVISNFAQQAVMAMWEDIQEKIVRTPFENVADLKNEVHKIFGWISNTRTESSFSTQLTKARQLEEMRTNLKKSLLDEDHILGEQH
ALQERFNKLASRIDEHEAELKAMKTEAETLSCLISEKANDLDKHRLETSTIRDEISSMEYTTITNETNVRSLEGVRNALESARQELKEFKWKP