; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc04g24960 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g24960
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionReverse transcriptase
Genome locationchr4:18111335..18112951
RNA-Seq ExpressionMoc04g24960
SyntenyMoc04g24960
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022142767.1 uncharacterized protein LOC111012805 [Momordica charantia]4.1e-4042.31Show/hide
Query:  RQTKSPVQNEGKGDQNSPDLESLDFDKEKPEERPEPSERQLGQKVKEFDLEELLDQADSPFTEEIMEEKVPPKYKLPTIKQF-------DGSADPV----
        +Q KSP  N GK D      E +  DK KP +RPE SE++  QK K FDLEELLDQADSPFTEEIM EK   +     + +F       +G  D V    
Subjt:  RQTKSPVQNEGKGDQNSPDLESLDFDKEKPEERPEPSERQLGQKVKEFDLEELLDQADSPFTEEIMEEKVPPKYKLPTIKQF-------DGSADPV----

Query:  -------DHL---------DTFREWME-----------IYGVSEAIRCRV---------------------------------FSFTLSGLAGVLMEIKD
               +HL          TF E +             Y   E+   R                                  ++ T   L  VLMEIK+
Subjt:  -------DHL---------DTFREWME-----------IYGVSEAIRCRV---------------------------------FSFTLSGLAGVLMEIKD

Query:  Q-------KMKAPFSKRSKGKYCLFHRDHSHATQDCFDLKEEVEGLIRREYLKAYLENSKATLIEENDNKSHDKKIRTIMGGP--TVSGRKRKASVREAR
        Q       +M A  +KRSKG+YCLFH DH HATQDCFDLKEEVEGLI R YLK Y+E  KAT   E+D KS  ++IRTIMGGP    SGRKRK  VREAR
Subjt:  Q-------KMKAPFSKRSKGKYCLFHRDHSHATQDCFDLKEEVEGLIRREYLKAYLENSKATLIEENDNKSHDKKIRTIMGGP--TVSGRKRKASVREAR

Query:  TSYDQHEVYHAF
         S +Q+EVYH +
Subjt:  TSYDQHEVYHAF

XP_022145129.1 uncharacterized protein LOC111014646 [Momordica charantia]4.4e-3447.06Show/hide
Query:  MTPEKSPQCSDDDCHPRRRLNRDDPQIGGAGDGTSQ--LGGRE-LLEIRVTAVPEQFQSKFAALEEKVERMFQRMTQ-----------------------
        MTPE+SP+ SDD+C  +RRLN DDPQ+GG  DGTSQ  L  +E L E      PE  Q +FA LE+KVE M QRMTQ                       
Subjt:  MTPEKSPQCSDDDCHPRRRLNRDDPQIGGAGDGTSQ--LGGRE-LLEIRVTAVPEQFQSKFAALEEKVERMFQRMTQ-----------------------

Query:  ---------------SILRLRGKDKRCTRILDCWSPQKDKRQTKSPVQNEGKGDQNSPDLESLDFDKEKPEERPEPSERQLGQKVKEFDLEELLDQADSP
                       S LR+ G  +R T+I D    QK K+Q K    N G+ D +  + E +  DK KP ++PE SE++  QK K FDLEELLDQADSP
Subjt:  ---------------SILRLRGKDKRCTRILDCWSPQKDKRQTKSPVQNEGKGDQNSPDLESLDFDKEKPEERPEPSERQLGQKVKEFDLEELLDQADSP

Query:  FTEEIMEEKVPPKYKLPTIKQ
        FTEEIM EKVPPK+KLPT+KQ
Subjt:  FTEEIMEEKVPPKYKLPTIKQ

XP_022150028.1 uncharacterized protein LOC111018300 [Momordica charantia]2.0e-3164.52Show/hide
Query:  LAGVLMEIKDQ-------KMKAPFSKRSKGKYCLFHRDHSHATQDCFDLKEEVEGLIRREYLKAYLENSKATLIEENDNKSHDKKIRTIMGGPTVS--GR
        L  VLMEIK Q       +M AP SKRSKG+YCLFHRDH HATQDCFDLK+EV+ LI+R YLK Y+E+ KAT   END+KS  ++IRTIMGGP     GR
Subjt:  LAGVLMEIKDQ-------KMKAPFSKRSKGKYCLFHRDHSHATQDCFDLKEEVEGLIRREYLKAYLENSKATLIEENDNKSHDKKIRTIMGGPTVS--GR

Query:  KRKASVREARTSYDQHEVYHAFQA
        KRKAS+RE RTS  QHE+YH F A
Subjt:  KRKASVREARTSYDQHEVYHAFQA

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]2.2e-7840.19Show/hide
Query:  MTPEKSPQCSDDDCHPRRRLNRDDPQIGGAGDGTSQLGGRE---LLEIRVTAVPEQFQSKFAALEEK-----------------VERMFQRMTQSI---L
        MTPE+SP+ SDDDC  +RRLN  DPQ+GG  DGTSQ        L E      PE FQ +FA LE+K                  E   +  T S+   L
Subjt:  MTPEKSPQCSDDDCHPRRRLNRDDPQIGGAGDGTSQLGGRE---LLEIRVTAVPEQFQSKFAALEEK-----------------VERMFQRMTQSI---L

Query:  RLRGKDKRCTRILDCWSPQKDKRQTKSPVQNEGKGDQNSPDLESLDFDKEKPEERPEPSERQLGQKVKEFDLEELLDQADSPFTEEIMEEKVPPKYKLPT
        R+ G  ++ TRI D   P+K K+Q KSP  N GK D +  + E +  DK KP +RPE SE++   K K FDLEELLDQADSPFTEEIM EKVPPK+KLPT
Subjt:  RLRGKDKRCTRILDCWSPQKDKRQTKSPVQNEGKGDQNSPDLESLDFDKEKPEERPEPSERQLGQKVKEFDLEELLDQADSPFTEEIMEEKVPPKYKLPT

Query:  IKQFDGSADPVDHLDTFREWMEIYGVSEAIRCRVFSFTLSGLA---------------------------------------------------------
        +KQFD + DPVDHLD +REWM+IYGVSEA+RCRVFS TL+G A                                                         
Subjt:  IKQFDGSADPVDHLDTFREWMEIYGVSEAIRCRVFSFTLSGLA---------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------GVLMEIKDQ-------KMKAPFSKRSKGKYCLFHRDHSHATQDCFDLKEEVEGLIRREYLKAYLENSKATLIEENDNKSHDKKIRTIMGG
                   VLMEIKDQ       +MKA  +KRSKG+YCLFHRDH HATQDCFDLKEEVEGLIRR YLK Y+E  KAT   E+D KS  ++IRTIMGG
Subjt:  ----------GVLMEIKDQ-------KMKAPFSKRSKGKYCLFHRDHSHATQDCFDLKEEVEGLIRREYLKAYLENSKATLIEENDNKSHDKKIRTIMGG

Query:  P--TVSGRKRKASVREARTSYDQHEVYHAF
        P    SGRKRKA VREARTS +Q+EVYHA+
Subjt:  P--TVSGRKRKASVREARTSYDQHEVYHAF

XP_022159109.1 uncharacterized protein LOC111025548 [Momordica charantia]5.2e-3560.71Show/hide
Query:  DKRCTRILDCWSPQKDKRQTKSPVQNEGKGDQNSPDLESLDFDKEKPEERPEPSERQLGQKVKEFDLEELLDQADSPFTEEIMEEKVPPKYKLPTIKQFD
        ++R TRI D    QK K+Q KS   N  K D ++ + E +  +K KP +RPE SE++  QK K FDLEELL QADSPFTEEIM EKVPPK+KLPT+K FD
Subjt:  DKRCTRILDCWSPQKDKRQTKSPVQNEGKGDQNSPDLESLDFDKEKPEERPEPSERQLGQKVKEFDLEELLDQADSPFTEEIMEEKVPPKYKLPTIKQFD

Query:  GSADPVDHLDTFREWMEIYGVSEAIRCRVFSFTLSGLAGV
        G  +PVDHLD +REWM+IYGVS+AIRCRVFS TL+G A +
Subjt:  GSADPVDHLDTFREWMEIYGVSEAIRCRVFSFTLSGLAGV

TrEMBL top hitse value%identityAlignment
A0A6J1CNT2 uncharacterized protein LOC1110128052.0e-4042.31Show/hide
Query:  RQTKSPVQNEGKGDQNSPDLESLDFDKEKPEERPEPSERQLGQKVKEFDLEELLDQADSPFTEEIMEEKVPPKYKLPTIKQF-------DGSADPV----
        +Q KSP  N GK D      E +  DK KP +RPE SE++  QK K FDLEELLDQADSPFTEEIM EK   +     + +F       +G  D V    
Subjt:  RQTKSPVQNEGKGDQNSPDLESLDFDKEKPEERPEPSERQLGQKVKEFDLEELLDQADSPFTEEIMEEKVPPKYKLPTIKQF-------DGSADPV----

Query:  -------DHL---------DTFREWME-----------IYGVSEAIRCRV---------------------------------FSFTLSGLAGVLMEIKD
               +HL          TF E +             Y   E+   R                                  ++ T   L  VLMEIK+
Subjt:  -------DHL---------DTFREWME-----------IYGVSEAIRCRV---------------------------------FSFTLSGLAGVLMEIKD

Query:  Q-------KMKAPFSKRSKGKYCLFHRDHSHATQDCFDLKEEVEGLIRREYLKAYLENSKATLIEENDNKSHDKKIRTIMGGP--TVSGRKRKASVREAR
        Q       +M A  +KRSKG+YCLFH DH HATQDCFDLKEEVEGLI R YLK Y+E  KAT   E+D KS  ++IRTIMGGP    SGRKRK  VREAR
Subjt:  Q-------KMKAPFSKRSKGKYCLFHRDHSHATQDCFDLKEEVEGLIRREYLKAYLENSKATLIEENDNKSHDKKIRTIMGGP--TVSGRKRKASVREAR

Query:  TSYDQHEVYHAF
         S +Q+EVYH +
Subjt:  TSYDQHEVYHAF

A0A6J1CUA7 uncharacterized protein LOC1110146462.1e-3447.06Show/hide
Query:  MTPEKSPQCSDDDCHPRRRLNRDDPQIGGAGDGTSQ--LGGRE-LLEIRVTAVPEQFQSKFAALEEKVERMFQRMTQ-----------------------
        MTPE+SP+ SDD+C  +RRLN DDPQ+GG  DGTSQ  L  +E L E      PE  Q +FA LE+KVE M QRMTQ                       
Subjt:  MTPEKSPQCSDDDCHPRRRLNRDDPQIGGAGDGTSQ--LGGRE-LLEIRVTAVPEQFQSKFAALEEKVERMFQRMTQ-----------------------

Query:  ---------------SILRLRGKDKRCTRILDCWSPQKDKRQTKSPVQNEGKGDQNSPDLESLDFDKEKPEERPEPSERQLGQKVKEFDLEELLDQADSP
                       S LR+ G  +R T+I D    QK K+Q K    N G+ D +  + E +  DK KP ++PE SE++  QK K FDLEELLDQADSP
Subjt:  ---------------SILRLRGKDKRCTRILDCWSPQKDKRQTKSPVQNEGKGDQNSPDLESLDFDKEKPEERPEPSERQLGQKVKEFDLEELLDQADSP

Query:  FTEEIMEEKVPPKYKLPTIKQ
        FTEEIM EKVPPK+KLPT+KQ
Subjt:  FTEEIMEEKVPPKYKLPTIKQ

A0A6J1D8C9 uncharacterized protein LOC1110183009.8e-3264.52Show/hide
Query:  LAGVLMEIKDQ-------KMKAPFSKRSKGKYCLFHRDHSHATQDCFDLKEEVEGLIRREYLKAYLENSKATLIEENDNKSHDKKIRTIMGGPTVS--GR
        L  VLMEIK Q       +M AP SKRSKG+YCLFHRDH HATQDCFDLK+EV+ LI+R YLK Y+E+ KAT   END+KS  ++IRTIMGGP     GR
Subjt:  LAGVLMEIKDQ-------KMKAPFSKRSKGKYCLFHRDHSHATQDCFDLKEEVEGLIRREYLKAYLENSKATLIEENDNKSHDKKIRTIMGGPTVS--GR

Query:  KRKASVREARTSYDQHEVYHAFQA
        KRKAS+RE RTS  QHE+YH F A
Subjt:  KRKASVREARTSYDQHEVYHAFQA

A0A6J1DWY0 uncharacterized protein LOC1110252931.1e-7840.19Show/hide
Query:  MTPEKSPQCSDDDCHPRRRLNRDDPQIGGAGDGTSQLGGRE---LLEIRVTAVPEQFQSKFAALEEK-----------------VERMFQRMTQSI---L
        MTPE+SP+ SDDDC  +RRLN  DPQ+GG  DGTSQ        L E      PE FQ +FA LE+K                  E   +  T S+   L
Subjt:  MTPEKSPQCSDDDCHPRRRLNRDDPQIGGAGDGTSQLGGRE---LLEIRVTAVPEQFQSKFAALEEK-----------------VERMFQRMTQSI---L

Query:  RLRGKDKRCTRILDCWSPQKDKRQTKSPVQNEGKGDQNSPDLESLDFDKEKPEERPEPSERQLGQKVKEFDLEELLDQADSPFTEEIMEEKVPPKYKLPT
        R+ G  ++ TRI D   P+K K+Q KSP  N GK D +  + E +  DK KP +RPE SE++   K K FDLEELLDQADSPFTEEIM EKVPPK+KLPT
Subjt:  RLRGKDKRCTRILDCWSPQKDKRQTKSPVQNEGKGDQNSPDLESLDFDKEKPEERPEPSERQLGQKVKEFDLEELLDQADSPFTEEIMEEKVPPKYKLPT

Query:  IKQFDGSADPVDHLDTFREWMEIYGVSEAIRCRVFSFTLSGLA---------------------------------------------------------
        +KQFD + DPVDHLD +REWM+IYGVSEA+RCRVFS TL+G A                                                         
Subjt:  IKQFDGSADPVDHLDTFREWMEIYGVSEAIRCRVFSFTLSGLA---------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------GVLMEIKDQ-------KMKAPFSKRSKGKYCLFHRDHSHATQDCFDLKEEVEGLIRREYLKAYLENSKATLIEENDNKSHDKKIRTIMGG
                   VLMEIKDQ       +MKA  +KRSKG+YCLFHRDH HATQDCFDLKEEVEGLIRR YLK Y+E  KAT   E+D KS  ++IRTIMGG
Subjt:  ----------GVLMEIKDQ-------KMKAPFSKRSKGKYCLFHRDHSHATQDCFDLKEEVEGLIRREYLKAYLENSKATLIEENDNKSHDKKIRTIMGG

Query:  P--TVSGRKRKASVREARTSYDQHEVYHAF
        P    SGRKRKA VREARTS +Q+EVYHA+
Subjt:  P--TVSGRKRKASVREARTSYDQHEVYHAF

A0A6J1E1E7 uncharacterized protein LOC1110255482.5e-3560.71Show/hide
Query:  DKRCTRILDCWSPQKDKRQTKSPVQNEGKGDQNSPDLESLDFDKEKPEERPEPSERQLGQKVKEFDLEELLDQADSPFTEEIMEEKVPPKYKLPTIKQFD
        ++R TRI D    QK K+Q KS   N  K D ++ + E +  +K KP +RPE SE++  QK K FDLEELL QADSPFTEEIM EKVPPK+KLPT+K FD
Subjt:  DKRCTRILDCWSPQKDKRQTKSPVQNEGKGDQNSPDLESLDFDKEKPEERPEPSERQLGQKVKEFDLEELLDQADSPFTEEIMEEKVPPKYKLPTIKQFD

Query:  GSADPVDHLDTFREWMEIYGVSEAIRCRVFSFTLSGLAGV
        G  +PVDHLD +REWM+IYGVS+AIRCRVFS TL+G A +
Subjt:  GSADPVDHLDTFREWMEIYGVSEAIRCRVFSFTLSGLAGV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTCCGGAGAAAAGTCCACAATGCTCTGATGACGATTGTCATCCAAGAAGGAGGCTCAACAGGGATGATCCTCAAATAGGAGGAGCTGGAGACGGAACGAGCCAACT
AGGAGGCCGAGAACTGCTCGAGATCCGTGTTACCGCCGTCCCGGAGCAATTCCAGAGTAAGTTTGCAGCCCTGGAAGAAAAGGTGGAAAGAATGTTTCAGCGCATGACCC
AAAGCATATTGAGGCTGAGAGGAAAGGACAAGAGATGCACCCGAATTCTTGACTGTTGGAGTCCACAGAAGGACAAAAGGCAAACAAAGTCCCCAGTACAAAATGAAGGC
AAAGGCGACCAAAATAGCCCAGATCTCGAATCATTAGATTTCGACAAGGAGAAACCAGAAGAACGACCCGAGCCATCAGAAAGACAATTAGGTCAGAAAGTGAAAGAGTT
TGATCTCGAAGAGCTACTAGACCAAGCTGATTCGCCATTTACAGAAGAGATCATGGAGGAGAAGGTACCTCCAAAATACAAACTGCCAACTATAAAGCAGTTTGACGGGT
CGGCCGATCCGGTGGATCACCTTGATACCTTTCGAGAATGGATGGAAATATATGGAGTGTCGGAAGCAATACGGTGTCGAGTGTTCTCCTTCACCCTTAGCGGGTTAGCC
GGAGTGTTAATGGAAATCAAGGACCAGAAAATGAAAGCACCTTTTAGTAAGAGAAGTAAGGGGAAATACTGTCTTTTCCACCGAGACCACAGCCACGCCACCCAAGACTG
TTTTGACCTCAAAGAAGAGGTGGAGGGACTCATTCGGAGAGAATATCTCAAAGCATATTTGGAGAACTCTAAAGCAACACTAATTGAAGAGAATGACAACAAGTCACATG
ACAAGAAAATCCGAACAATCATGGGTGGTCCAACGGTGTCTGGTCGGAAGAGAAAGGCCAGTGTACGGGAAGCAAGGACAAGTTATGATCAACATGAAGTATACCATGCC
TTTCAAGCATGA
mRNA sequenceShow/hide mRNA sequence
ATGACTCCGGAGAAAAGTCCACAATGCTCTGATGACGATTGTCATCCAAGAAGGAGGCTCAACAGGGATGATCCTCAAATAGGAGGAGCTGGAGACGGAACGAGCCAACT
AGGAGGCCGAGAACTGCTCGAGATCCGTGTTACCGCCGTCCCGGAGCAATTCCAGAGTAAGTTTGCAGCCCTGGAAGAAAAGGTGGAAAGAATGTTTCAGCGCATGACCC
AAAGCATATTGAGGCTGAGAGGAAAGGACAAGAGATGCACCCGAATTCTTGACTGTTGGAGTCCACAGAAGGACAAAAGGCAAACAAAGTCCCCAGTACAAAATGAAGGC
AAAGGCGACCAAAATAGCCCAGATCTCGAATCATTAGATTTCGACAAGGAGAAACCAGAAGAACGACCCGAGCCATCAGAAAGACAATTAGGTCAGAAAGTGAAAGAGTT
TGATCTCGAAGAGCTACTAGACCAAGCTGATTCGCCATTTACAGAAGAGATCATGGAGGAGAAGGTACCTCCAAAATACAAACTGCCAACTATAAAGCAGTTTGACGGGT
CGGCCGATCCGGTGGATCACCTTGATACCTTTCGAGAATGGATGGAAATATATGGAGTGTCGGAAGCAATACGGTGTCGAGTGTTCTCCTTCACCCTTAGCGGGTTAGCC
GGAGTGTTAATGGAAATCAAGGACCAGAAAATGAAAGCACCTTTTAGTAAGAGAAGTAAGGGGAAATACTGTCTTTTCCACCGAGACCACAGCCACGCCACCCAAGACTG
TTTTGACCTCAAAGAAGAGGTGGAGGGACTCATTCGGAGAGAATATCTCAAAGCATATTTGGAGAACTCTAAAGCAACACTAATTGAAGAGAATGACAACAAGTCACATG
ACAAGAAAATCCGAACAATCATGGGTGGTCCAACGGTGTCTGGTCGGAAGAGAAAGGCCAGTGTACGGGAAGCAAGGACAAGTTATGATCAACATGAAGTATACCATGCC
TTTCAAGCATGA
Protein sequenceShow/hide protein sequence
MTPEKSPQCSDDDCHPRRRLNRDDPQIGGAGDGTSQLGGRELLEIRVTAVPEQFQSKFAALEEKVERMFQRMTQSILRLRGKDKRCTRILDCWSPQKDKRQTKSPVQNEG
KGDQNSPDLESLDFDKEKPEERPEPSERQLGQKVKEFDLEELLDQADSPFTEEIMEEKVPPKYKLPTIKQFDGSADPVDHLDTFREWMEIYGVSEAIRCRVFSFTLSGLA
GVLMEIKDQKMKAPFSKRSKGKYCLFHRDHSHATQDCFDLKEEVEGLIRREYLKAYLENSKATLIEENDNKSHDKKIRTIMGGPTVSGRKRKASVREARTSYDQHEVYHA
FQA