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Moc04g25250 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g25250
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr4:18330691..18334047
RNA-Seq ExpressionMoc04g25250
SyntenyMoc04g25250
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022142775.1 protein NYNRIN-like [Momordica charantia]5.0e-1761.73Show/hide
Query:  RLENSNADALAKLTSAYETDLARSVSMEILDTLSIIELDVMEIDSQPPSWMYLVRTYLTSSVPTDPKEAKKLGRKAAWFIL
        R +NSNADALAKL SAYETDL  SV +EILD  SI+E ++ME+DSQPPSWM  +R +L  ++  DP+EAKK+ RKAA + L
Subjt:  RLENSNADALAKLTSAYETDLARSVSMEILDTLSIIELDVMEIDSQPPSWMYLVRTYLTSSVPTDPKEAKKLGRKAAWFIL

XP_022143565.1 uncharacterized protein LOC111013434 [Momordica charantia]1.2e-1864.2Show/hide
Query:  RLENSNADALAKLTSAYETDLARSVSMEILDTLSIIELDVMEIDSQPPSWMYLVRTYLTSSVPTDPKEAKKLGRKAAWFIL
        R +NSN+DALAKL SAYETDLARSV +EILD  SI+E D+MEIDS PPSWM  ++ +L   VP DP+E KK+ RKAA ++L
Subjt:  RLENSNADALAKLTSAYETDLARSVSMEILDTLSIIELDVMEIDSQPPSWMYLVRTYLTSSVPTDPKEAKKLGRKAAWFIL

XP_022149378.1 uncharacterized protein LOC111017809 [Momordica charantia]4.5e-1864.2Show/hide
Query:  RLENSNADALAKLTSAYETDLARSVSMEILDTLSIIELDVMEIDSQPPSWMYLVRTYLTSSVPTDPKEAKKLGRKAAWFIL
        R ENSNADALAKL SAYETDLARSV +EILD  SI+E D+ME+D+  PSWM L+  ++  ++P DPKE KK+ RK A FIL
Subjt:  RLENSNADALAKLTSAYETDLARSVSMEILDTLSIIELDVMEIDSQPPSWMYLVRTYLTSSVPTDPKEAKKLGRKAAWFIL

XP_022150033.1 uncharacterized protein LOC111018305 [Momordica charantia]3.5e-1864.2Show/hide
Query:  RLENSNADALAKLTSAYETDLARSVSMEILDTLSIIELDVMEIDSQPPSWMYLVRTYLTSSVPTDPKEAKKLGRKAAWFIL
        R +NSN DA AKL SAYET+LARSVS+EILD  SI+E D+ME+DSQPPSWM  +R  L  ++P D +EAKK+ RKAA F+L
Subjt:  RLENSNADALAKLTSAYETDLARSVSMEILDTLSIIELDVMEIDSQPPSWMYLVRTYLTSSVPTDPKEAKKLGRKAAWFIL

XP_022156791.1 uncharacterized protein LOC111023625 [Momordica charantia]5.9e-1864.2Show/hide
Query:  RLENSNADALAKLTSAYETDLARSVSMEILDTLSIIELDVMEIDSQPPSWMYLVRTYLTSSVPTDPKEAKKLGRKAAWFIL
        RL+ SNADALAKL S YETDLARSV +EILD  SI+ELD+MEIDS P SWM  ++ +L   VP DP+E KK+ RKAA ++L
Subjt:  RLENSNADALAKLTSAYETDLARSVSMEILDTLSIIELDVMEIDSQPPSWMYLVRTYLTSSVPTDPKEAKKLGRKAAWFIL

TrEMBL top hitse value%identityAlignment
A0A6J1CLW5 protein NYNRIN-like2.4e-1761.73Show/hide
Query:  RLENSNADALAKLTSAYETDLARSVSMEILDTLSIIELDVMEIDSQPPSWMYLVRTYLTSSVPTDPKEAKKLGRKAAWFIL
        R +NSNADALAKL SAYETDL  SV +EILD  SI+E ++ME+DSQPPSWM  +R +L  ++  DP+EAKK+ RKAA + L
Subjt:  RLENSNADALAKLTSAYETDLARSVSMEILDTLSIIELDVMEIDSQPPSWMYLVRTYLTSSVPTDPKEAKKLGRKAAWFIL

A0A6J1CP53 Ribonuclease H5.8e-1964.2Show/hide
Query:  RLENSNADALAKLTSAYETDLARSVSMEILDTLSIIELDVMEIDSQPPSWMYLVRTYLTSSVPTDPKEAKKLGRKAAWFIL
        R +NSN+DALAKL SAYETDLARSV +EILD  SI+E D+MEIDS PPSWM  ++ +L   VP DP+E KK+ RKAA ++L
Subjt:  RLENSNADALAKLTSAYETDLARSVSMEILDTLSIIELDVMEIDSQPPSWMYLVRTYLTSSVPTDPKEAKKLGRKAAWFIL

A0A6J1D6M1 Ribonuclease H2.2e-1864.2Show/hide
Query:  RLENSNADALAKLTSAYETDLARSVSMEILDTLSIIELDVMEIDSQPPSWMYLVRTYLTSSVPTDPKEAKKLGRKAAWFIL
        R ENSNADALAKL SAYETDLARSV +EILD  SI+E D+ME+D+  PSWM L+  ++  ++P DPKE KK+ RK A FIL
Subjt:  RLENSNADALAKLTSAYETDLARSVSMEILDTLSIIELDVMEIDSQPPSWMYLVRTYLTSSVPTDPKEAKKLGRKAAWFIL

A0A6J1D8D3 Ribonuclease H1.7e-1864.2Show/hide
Query:  RLENSNADALAKLTSAYETDLARSVSMEILDTLSIIELDVMEIDSQPPSWMYLVRTYLTSSVPTDPKEAKKLGRKAAWFIL
        R +NSN DA AKL SAYET+LARSVS+EILD  SI+E D+ME+DSQPPSWM  +R  L  ++P D +EAKK+ RKAA F+L
Subjt:  RLENSNADALAKLTSAYETDLARSVSMEILDTLSIIELDVMEIDSQPPSWMYLVRTYLTSSVPTDPKEAKKLGRKAAWFIL

A0A6J1DW17 Ribonuclease H2.9e-1864.2Show/hide
Query:  RLENSNADALAKLTSAYETDLARSVSMEILDTLSIIELDVMEIDSQPPSWMYLVRTYLTSSVPTDPKEAKKLGRKAAWFIL
        RL+ SNADALAKL S YETDLARSV +EILD  SI+ELD+MEIDS P SWM  ++ +L   VP DP+E KK+ RKAA ++L
Subjt:  RLENSNADALAKLTSAYETDLARSVSMEILDTLSIIELDVMEIDSQPPSWMYLVRTYLTSSVPTDPKEAKKLGRKAAWFIL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGCACCCGAGTGCGCATAATGGAGGAGACATACAACAACATGTTACAAGCAAATCGTACAGGATCTCAGTCTTGGGTCCCTATGGAAGTGGAAGAGCAACAC
TTTGAGGGTGAAACTCGAGATCCTCCTTTACAACCTGAGAATGATGATCAACACCTCGTTGCTGATTACAATCGTCAGGAGGGCGACCTAAGGAAAATACTGGCC
GACAAGAAGAAGAAGAACTCCGCTCTACGAGGCTGCATCCGACGACATCAAGTGCCAAGCATTCTAGATTGCTTTGACTGGAAGTGCTCGACTTTGGTACCGAAG
GCTGCCAACGAGAAGGCCAAGAAGGTAATTAACAGTCAAGAGCTGCTCCAGAACAAGACAGATCGGATAGAGAAGAAATCTGATCAGAAGAGGATGAATCAGTCT
GAAAAGGGCAATGCAGACTCCAAGTCTCAAGACAAGGGGTCGACATCTCAGTCCTCCCAGGCATTCAAACTCAGGCTCCAACCGAGGCCGACCTTATTAGTGATA
TACTCCCACCACCATCCCAATTCTAGATTAGAAAACTCAAATGCAGATGCTCTAGCTAAATTGACATCTGCGTACGAGACCGATCTGGCAAGATCGGTTTCAATG
GAGATACTTGACACTCTATCCATTATAGAGCTTGATGTGATGGAGATTGACTCTCAGCCTCCATCATGGATGTATCTGGTCAGGACATACCTGACAAGCAGTGTC
CCGACAGATCCAAAAGAAGCAAAGAAGCTCGGTCGGAAGGCAGCTTGGTTCATACTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGCGCACCCGAGTGCGCATAATGGAGGAGACATACAACAACATGTTACAAGCAAATCGTACAGGATCTCAGTCTTGGGTCCCTATGGAAGTGGAAGAGCAACAC
TTTGAGGGTGAAACTCGAGATCCTCCTTTACAACCTGAGAATGATGATCAACACCTCGTTGCTGATTACAATCGTCAGGAGGGCGACCTAAGGAAAATACTGGCC
GACAAGAAGAAGAAGAACTCCGCTCTACGAGGCTGCATCCGACGACATCAAGTGCCAAGCATTCTAGATTGCTTTGACTGGAAGTGCTCGACTTTGGTACCGAAG
GCTGCCAACGAGAAGGCCAAGAAGGTAATTAACAGTCAAGAGCTGCTCCAGAACAAGACAGATCGGATAGAGAAGAAATCTGATCAGAAGAGGATGAATCAGTCT
GAAAAGGGCAATGCAGACTCCAAGTCTCAAGACAAGGGGTCGACATCTCAGTCCTCCCAGGCATTCAAACTCAGGCTCCAACCGAGGCCGACCTTATTAGTGATA
TACTCCCACCACCATCCCAATTCTAGATTAGAAAACTCAAATGCAGATGCTCTAGCTAAATTGACATCTGCGTACGAGACCGATCTGGCAAGATCGGTTTCAATG
GAGATACTTGACACTCTATCCATTATAGAGCTTGATGTGATGGAGATTGACTCTCAGCCTCCATCATGGATGTATCTGGTCAGGACATACCTGACAAGCAGTGTC
CCGACAGATCCAAAAGAAGCAAAGAAGCTCGGTCGGAAGGCAGCTTGGTTCATACTCTGA
Protein sequenceShow/hide protein sequence
MRTRVRIMEETYNNMLQANRTGSQSWVPMEVEEQHFEGETRDPPLQPENDDQHLVADYNRQEGDLRKILADKKKKNSALRGCIRRHQVPSILDCFDWKCSTLVPK
AANEKAKKVINSQELLQNKTDRIEKKSDQKRMNQSEKGNADSKSQDKGSTSQSSQAFKLRLQPRPTLLVIYSHHHPNSRLENSNADALAKLTSAYETDLARSVSM
EILDTLSIIELDVMEIDSQPPSWMYLVRTYLTSSVPTDPKEAKKLGRKAAWFIL