CuGenDBv2

Gene ID	Moc04g25280
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	rho GDP-dissociation inhibitor 1-like
Genome location	chr4:18363074..18367975
RNA-Seq Expression	Moc04g25280
Synteny	Moc04g25280
Gene Ontology terms	GO:0007266 - Rho protein signal transduction (biological process) GO:0050790 - regulation of catalytic activity (biological process) GO:0005829 - cytosol (cellular component) GO:0016020 - membrane (cellular component) GO:0005094 - Rho GDP-dissociation inhibitor activity (molecular function)
InterPro domains	IPR000406 - Rho protein GDP-dissociation inhibitor IPR014756 - Immunoglobulin E-set IPR024792 - Rho GDP-dissociation inhibitor domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

TYK13004.1 rho GDP-dissociation inhibitor 1 isoform X2 [Cucumis melo var. makuwa]

6.3e-15

91.67

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Query:  EDKDEEGRKIELGPQCTLKEQLEKDKDDESLRRWKEQLLGSVDTAAVG
        +D+DEEGRKIELGPQCTLKEQLEKDKDDESLRRWKEQLLGSVD +AVG
Subjt:  EDKDEEGRKIELGPQCTLKEQLEKDKDDESLRRWKEQLLGSVDTAAVG

XP_008440066.1 PREDICTED: rho GDP-dissociation inhibitor 1 isoform X1 [Cucumis melo]

6.3e-15

91.67

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Query:  EDKDEEGRKIELGPQCTLKEQLEKDKDDESLRRWKEQLLGSVDTAAVG
        +D+DEEGRKIELGPQCTLKEQLEKDKDDESLRRWKEQLLGSVD +AVG
Subjt:  EDKDEEGRKIELGPQCTLKEQLEKDKDDESLRRWKEQLLGSVDTAAVG

XP_008440067.1 PREDICTED: rho GDP-dissociation inhibitor 1 isoform X2 [Cucumis melo]

6.3e-15

91.67

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Query:  EDKDEEGRKIELGPQCTLKEQLEKDKDDESLRRWKEQLLGSVDTAAVG
        +D+DEEGRKIELGPQCTLKEQLEKDKDDESLRRWKEQLLGSVD +AVG
Subjt:  EDKDEEGRKIELGPQCTLKEQLEKDKDDESLRRWKEQLLGSVDTAAVG

XP_022133027.1 rho GDP-dissociation inhibitor 1-like [Momordica charantia]

1.3e-15

95.83

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Query:  EDKDEEGRKIELGPQCTLKEQLEKDKDDESLRRWKEQLLGSVDTAAVG
        ED+DEEGRKIELGPQCTLKEQLEKDKDDESLRRWKEQLLGSVD AAVG
Subjt:  EDKDEEGRKIELGPQCTLKEQLEKDKDDESLRRWKEQLLGSVDTAAVG

XP_038882895.1 rho GDP-dissociation inhibitor 1-like [Benincasa hispida]

2.8e-15

93.75

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Query:  EDKDEEGRKIELGPQCTLKEQLEKDKDDESLRRWKEQLLGSVDTAAVG
        +D+DEEGRKIELGPQCTLKEQLEKDKDDESLRRWKEQLLGSVD AAVG
Subjt:  EDKDEEGRKIELGPQCTLKEQLEKDKDDESLRRWKEQLLGSVDTAAVG

TrEMBL top hits

e value

%identity

Alignment

A0A1S3B0V5 rho GDP-dissociation inhibitor 1 isoform X1

3.1e-15

91.67

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Query:  EDKDEEGRKIELGPQCTLKEQLEKDKDDESLRRWKEQLLGSVDTAAVG
        +D+DEEGRKIELGPQCTLKEQLEKDKDDESLRRWKEQLLGSVD +AVG
Subjt:  EDKDEEGRKIELGPQCTLKEQLEKDKDDESLRRWKEQLLGSVDTAAVG

A0A1S3B0Z9 rho GDP-dissociation inhibitor 1 isoform X2

3.1e-15

91.67

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Query:  EDKDEEGRKIELGPQCTLKEQLEKDKDDESLRRWKEQLLGSVDTAAVG
        +D+DEEGRKIELGPQCTLKEQLEKDKDDESLRRWKEQLLGSVD +AVG
Subjt:  EDKDEEGRKIELGPQCTLKEQLEKDKDDESLRRWKEQLLGSVDTAAVG

A0A5D3CPP6 Rho GDP-dissociation inhibitor 1 isoform X2

3.1e-15

91.67

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Query:  EDKDEEGRKIELGPQCTLKEQLEKDKDDESLRRWKEQLLGSVDTAAVG
        +D+DEEGRKIELGPQCTLKEQLEKDKDDESLRRWKEQLLGSVD +AVG
Subjt:  EDKDEEGRKIELGPQCTLKEQLEKDKDDESLRRWKEQLLGSVDTAAVG

A0A6J1BVG7 rho GDP-dissociation inhibitor 1-like

6.2e-16

95.83

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Query:  EDKDEEGRKIELGPQCTLKEQLEKDKDDESLRRWKEQLLGSVDTAAVG
        ED+DEEGRKIELGPQCTLKEQLEKDKDDESLRRWKEQLLGSVD AAVG
Subjt:  EDKDEEGRKIELGPQCTLKEQLEKDKDDESLRRWKEQLLGSVDTAAVG

A0A6J1GF88 rho GDP-dissociation inhibitor 1-like isoform X2

2.0e-14

87.5

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Query:  EDKDEEGRKIELGPQCTLKEQLEKDKDDESLRRWKEQLLGSVDTAAVG
        +D+DEEGRKIELGPQCTLK+Q EKDKDDESLRRWKEQLLGSVD +AVG
Subjt:  EDKDEEGRKIELGPQCTLKEQLEKDKDDESLRRWKEQLLGSVDTAAVG

SwissProt top hits

e value

%identity

Alignment

Q9SFC6 Rho GDP-dissociation inhibitor 1

3.4e-11

64.58

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Query:  EDKDEEGRKIELGPQCTLKEQLEKDKDDESLRRWKEQLLGSVDTAAVG
        E+++++  K++LGPQ T+KE LEKDKDDESLR+WKEQLLGSVD   +G
Subjt:  EDKDEEGRKIELGPQCTLKEQLEKDKDDESLRRWKEQLLGSVDTAAVG

Arabidopsis top hits

e value

%identity

Alignment

AT1G12070.1 Immunoglobulin E-set superfamily protein

1.5e-14

50.55

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Query:  EDKDEEGRKIELGPQCTLKEQLEKDKDDESLRRWKEQLLGSVDTAAVGGNAFCLCKDMHNSVFQIAARTRPPDPSEYL------GGPAQKG
        +D++EE +K+ELGP   LKEQLEKDKDDESLRRWKEQLLGSVD   VG     L K +  ++       R PD  + +      G PA KG
Subjt:  EDKDEEGRKIELGPQCTLKEQLEKDKDDESLRRWKEQLLGSVDTAAVGGNAFCLCKDMHNSVFQIAARTRPPDPSEYL------GGPAQKG

AT1G62450.1 Immunoglobulin E-set superfamily protein

1.8e-12

68.75

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Query:  EDKDEEGRKIELGPQCTLKEQLEKDKDDESLRRWKEQLLGSVDTAAVG
        +D+++E +K+ELGP   LKEQLE+DKDDESLRRWKEQLLG VD   VG
Subjt:  EDKDEEGRKIELGPQCTLKEQLEKDKDDESLRRWKEQLLGSVDTAAVG

AT3G07880.1 Immunoglobulin E-set superfamily protein

2.4e-12

64.58

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Query:  EDKDEEGRKIELGPQCTLKEQLEKDKDDESLRRWKEQLLGSVDTAAVG
        E+++++  K++LGPQ T+KE LEKDKDDESLR+WKEQLLGSVD   +G
Subjt:  EDKDEEGRKIELGPQCTLKEQLEKDKDDESLRRWKEQLLGSVDTAAVG

Sequences

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CDS sequence

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ATGAAGTCGTTGGAACTCAAAGTGCGTGCCGATCAACCTCTTATTGATGAAATAACAGAAGAAGTAATAATGGATAATGTGGAGGATCGAAGAGGGAAAAGGAAAGAGAT
AGAGGAATTTGAGGTGTCTGCCGATCAACCTCATATTGAAGAAATAACAGAAGAAGAAGTAATACTCGATAGTGTGGATCGAAGAGGGAAAAGGAAAGAGAGAGAGGAAT
CTGAGAATGTTAAAAACCCAAGACGCAAAGATAGGAGGAAAAAAAGGAAATATGATAAAAGCAATTTTATTGGTCAGAACCGGACAGATGTTGAGGAAATTCTAGGTGTG
CCCGCGGGTCTGAAAACTGTGAAGGAGCACTCGAGGTCGAAGTCAGGTGGGCAAAGTCTGTTTCTTTTGTCTGCCATTAGGGGGTCTGATTCTGTATTTTTCTTTGGTGG
GGTGGATGGTCTTTTGAGGAAATGGGTCTGGAAGAAGGAAATGGAGGATAAAGATGAGGAGGGAAGAAAGATCGAGTTGGGTCCTCAGTGTACCCTCAAAGAACAACTTG
AGAAAGATAAGGATGATGAGAGCCTCAGAAGGTGGAAGGAACAGCTTCTTGGGAGTGTGGATACCGCTGCTGTAGGAGGTAATGCTTTCTGTTTATGCAAGGATATGCAC
AACAGTGTATTTCAGATTGCAGCTCGAACCCGACCTCCGGACCCCTCTGAATACTTGGGCGGACCTGCACAAAAAGGTGAGCACTCCGACGATCAAGTCAGTATAGGTCG
GATTCCCAGTTTAGTTCGAGGTCAGAAATCATCGTACCTGATCGCGGAATGA

mRNA sequence

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Protein sequence

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MKSLELKVRADQPLIDEITEEVIMDNVEDRRGKRKEIEEFEVSADQPHIEEITEEEVILDSVDRRGKRKEREESENVKNPRRKDRRKKRKYDKSNFIGQNRTDVEEILGV
PAGLKTVKEHSRSKSGGQSLFLLSAIRGSDSVFFFGGVDGLLRKWVWKKEMEDKDEEGRKIELGPQCTLKEQLEKDKDDESLRRWKEQLLGSVDTAAVGGNAFCLCKDMH
NSVFQIAARTRPPDPSEYLGGPAQKGEHSDDQVSIGRIPSLVRGQKSSYLIAE

Moc04g25280 (gene) of Bitter gourd (OHB3-1) v2 genome