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Moc04g25410 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g25410
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr4:18455517..18455990
RNA-Seq ExpressionMoc04g25410
SyntenyMoc04g25410
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0044260 - cellular macromolecule metabolic process (biological process)
GO:0016772 - transferase activity, transferring phosphorus-containing groups (molecular function)
GO:0097159 - organic cyclic compound binding (molecular function)
GO:1901363 - heterocyclic compound binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAD5507982.1 hypothetical protein E3N88_15685 [Mikania micrantha]1.2e-1442.11Show/hide
Query:  YEKPSVDTKILLWMKYFDIHMEEGTSVNSHINELTNILNKLEGMGVKIEEEMKAMMLLTYFPDSWETMKTAVSNSLGENSLKVLAICDAALFEEAQR---
        YEKPS   K+ L  + F + M EG+SV  HIN L +IL++L  +G+K ++E KA++LL+  PDSW    TAV+NS+G + L    I D  L E+ +R   
Subjt:  YEKPSVDTKILLWMKYFDIHMEEGTSVNSHINELTNILNKLEGMGVKIEEEMKAMMLLTYFPDSWETMKTAVSNSLGENSLKVLAICDAALFEEAQR---

Query:  KLGKMCIYFRGRKR
        K G   +++ GR R
Subjt:  KLGKMCIYFRGRKR

KAG7561662.1 Zinc finger CCHC-type superfamily [Arabidopsis thaliana x Arabidopsis arenosa]8.9e-1542.27Show/hide
Query:  YEKPSVDTKILLWMKYFDIHMEEGTSVNSHINELTNILNKLEGMGVKIEEEMKAMMLLTYFPDSWETMKTAVSNSLGENSLKVLAICDAALFEEAQR
        YEKPS + K+ L  K F + MEEG  V +H+NE   I+N+L  + ++ ++E++A++L+   P+SWE M+ AVSNS+G   LK + + D  L EE +R
Subjt:  YEKPSVDTKILLWMKYFDIHMEEGTSVNSHINELTNILNKLEGMGVKIEEEMKAMMLLTYFPDSWETMKTAVSNSLGENSLKVLAICDAALFEEAQR

KAG7584790.1 Zinc finger CCHC-type superfamily [Arabidopsis thaliana x Arabidopsis arenosa]5.2e-1543.3Show/hide
Query:  YEKPSVDTKILLWMKYFDIHMEEGTSVNSHINELTNILNKLEGMGVKIEEEMKAMMLLTYFPDSWETMKTAVSNSLGENSLKVLAICDAALFEEAQR
        YEKPS + K+ L  K F + MEEG  V +H+NE   I+N+L  + ++ ++E++A++LL   P+SWE M+ AVSNS+G   LK + + D  L EE +R
Subjt:  YEKPSVDTKILLWMKYFDIHMEEGTSVNSHINELTNILNKLEGMGVKIEEEMKAMMLLTYFPDSWETMKTAVSNSLGENSLKVLAICDAALFEEAQR

KAG7593230.1 Pentatricopeptide repeat [Arabidopsis thaliana x Arabidopsis arenosa]5.2e-1543.3Show/hide
Query:  YEKPSVDTKILLWMKYFDIHMEEGTSVNSHINELTNILNKLEGMGVKIEEEMKAMMLLTYFPDSWETMKTAVSNSLGENSLKVLAICDAALFEEAQR
        YEKPS + K+ L  K F + MEEG  V +H+NE   I+N+L  + ++ ++E++A++LL   P+SWE M+ AVSNS+G   LK + + D  L EE +R
Subjt:  YEKPSVDTKILLWMKYFDIHMEEGTSVNSHINELTNILNKLEGMGVKIEEEMKAMMLLTYFPDSWETMKTAVSNSLGENSLKVLAICDAALFEEAQR

RZC29599.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Glycine soja]8.9e-1536.36Show/hide
Query:  MTDKDWNEMDEQAVANNRMS-------------------------YEKPSVDTKILLWMKYFDIHMEEGTSVNSHINELTNILNKLEGMGVKIEEEMKAM
        M  ++WN +D QA+   R++                         YEKPS   K+ L  + F++ M EG SV  HINE   IL +LE + +K E+E+KA+
Subjt:  MTDKDWNEMDEQAVANNRMS-------------------------YEKPSVDTKILLWMKYFDIHMEEGTSVNSHINELTNILNKLEGMGVKIEEEMKAM

Query:  MLLTYFPDSWETMKTAVSNSLGENSLKVLAICDAALFEEAQRK
        +LL+  PDSW    TAVS+S  EN+LK+  I D  L E+ +++
Subjt:  MLLTYFPDSWETMKTAVSNSLGENSLKVLAICDAALFEEAQRK

TrEMBL top hitse value%identityAlignment
A0A0D3AEM1 CCHC-type domain-containing protein8.7e-1645.36Show/hide
Query:  YEKPSVDTKILLWMKYFDIHMEEGTSVNSHINELTNILNKLEGMGVKIEEEMKAMMLLTYFPDSWETMKTAVSNSLGENSLKVLAICDAALFEEAQR
        YEKPS ++K+ L  K F + MEEG  V +HINE   I+N+L  + ++ E+E++A++LL   P+SWE+M+ AVSNS+G   LK   + D  L EE +R
Subjt:  YEKPSVDTKILLWMKYFDIHMEEGTSVNSHINELTNILNKLEGMGVKIEEEMKAMMLLTYFPDSWETMKTAVSNSLGENSLKVLAICDAALFEEAQR

A0A2N9EUG1 Uncharacterized protein1.9e-1537.9Show/hide
Query:  MTDKDWNEMDEQAVANNRM------SYEKPSVDTKILLWMKYFDIHMEEGTSVNSHINELTNILNKLEGMGVKIEEEMKAMMLLTYFPDSWETMKTAVSN
        M D +W  +D Q      +       YEKPS + K+ L  K F++ M EGT+V  H+NE   I N+L  + ++ ++E++A+++L   P+SWE M+ AVSN
Subjt:  MTDKDWNEMDEQAVANNRM------SYEKPSVDTKILLWMKYFDIHMEEGTSVNSHINELTNILNKLEGMGVKIEEEMKAMMLLTYFPDSWETMKTAVSN

Query:  SLGENSLKVLAICDAALFEEAQRK
        S G+  LK   I D  L EE +R+
Subjt:  SLGENSLKVLAICDAALFEEAQRK

A0A2N9GTI4 Uncharacterized protein1.9e-1537.9Show/hide
Query:  MTDKDWNEMDEQAVANNRM------SYEKPSVDTKILLWMKYFDIHMEEGTSVNSHINELTNILNKLEGMGVKIEEEMKAMMLLTYFPDSWETMKTAVSN
        M D +W  +D Q      +       YEKPS + K+ L  K F++ M EGT+V  H+NE   I N+L  + ++ ++E++A+++L   P+SWE M+ AVSN
Subjt:  MTDKDWNEMDEQAVANNRM------SYEKPSVDTKILLWMKYFDIHMEEGTSVNSHINELTNILNKLEGMGVKIEEEMKAMMLLTYFPDSWETMKTAVSN

Query:  SLGENSLKVLAICDAALFEEAQRK
        S G+  LK   I D  L EE +R+
Subjt:  SLGENSLKVLAICDAALFEEAQRK

A0A2N9HHD8 Uncharacterized protein1.9e-1537.9Show/hide
Query:  MTDKDWNEMDEQAVANNRM------SYEKPSVDTKILLWMKYFDIHMEEGTSVNSHINELTNILNKLEGMGVKIEEEMKAMMLLTYFPDSWETMKTAVSN
        M D +W  +D Q      +       YEKPS + K+ L  K F++ M EGT+V  H+NE   I N+L  + ++ ++E++A+++L   P+SWE M+ AVSN
Subjt:  MTDKDWNEMDEQAVANNRM------SYEKPSVDTKILLWMKYFDIHMEEGTSVNSHINELTNILNKLEGMGVKIEEEMKAMMLLTYFPDSWETMKTAVSN

Query:  SLGENSLKVLAICDAALFEEAQRK
        S G+  LK   I D  L EE +R+
Subjt:  SLGENSLKVLAICDAALFEEAQRK

A0A445M280 Retrovirus-related Pol polyprotein from transposon TNT 1-944.3e-1536.36Show/hide
Query:  MTDKDWNEMDEQAVANNRMS-------------------------YEKPSVDTKILLWMKYFDIHMEEGTSVNSHINELTNILNKLEGMGVKIEEEMKAM
        M  ++WN +D QA+   R++                         YEKPS   K+ L  + F++ M EG SV  HINE   IL +LE + +K E+E+KA+
Subjt:  MTDKDWNEMDEQAVANNRMS-------------------------YEKPSVDTKILLWMKYFDIHMEEGTSVNSHINELTNILNKLEGMGVKIEEEMKAM

Query:  MLLTYFPDSWETMKTAVSNSLGENSLKVLAICDAALFEEAQRK
        +LL+  PDSW    TAVS+S  EN+LK+  I D  L E+ +++
Subjt:  MLLTYFPDSWETMKTAVSNSLGENSLKVLAICDAALFEEAQRK

SwissProt top hitse value%identityAlignment
P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-944.0e-1028.67Show/hide
Query:  MTDKDWNEMDEQA-----------VANNRMS--------------YEKPSVDTKILLWMKYFDIHMEEGTSVNSHINELTNILNKLEGMGVKIEEEMKAM
        M  +DW ++DE+A           V NN +               Y   ++  K+ L  + + +HM EGT+  SH+N    ++ +L  +GVKIEEE KA+
Subjt:  MTDKDWNEMDEQA-----------VANNRMS--------------YEKPSVDTKILLWMKYFDIHMEEGTSVNSHINELTNILNKLEGMGVKIEEEMKAM

Query:  MLLTYFPDSWETMKTAVSNSLGENSLKVLAICDAALFEEAQRK
        +LL   P S++ + T + +  G+ ++++  +  A L  E  RK
Subjt:  MLLTYFPDSWETMKTAVSNSLGENSLKVLAICDAALFEEAQRK

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGGATAAGGATTGGAATGAGATGGATGAGCAAGCCGTTGCGAACAACAGAATGTCGTATGAGAAACCTTCTGTCGACACTAAAATACTTCTATGGATGAAGTATTT
TGATATCCACATGGAGGAGGGAACCTCGGTGAATTCCCACATTAATGAGCTTACCAATATCTTGAACAAATTAGAAGGGATGGGTGTCAAGATTGAGGAAGAGATGAAGG
CTATGATGCTGTTGACATATTTCCCTGACAGTTGGGAGACGATGAAGACCGCGGTGTCGAATTCGCTAGGGGAAAATAGCTTGAAAGTTTTAGCTATTTGTGATGCCGCC
TTATTTGAGGAAGCCCAGAGAAAATTAGGAAAAATGTGCATCTACTTCAGGGGTAGAAAACGGGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGACGGATAAGGATTGGAATGAGATGGATGAGCAAGCCGTTGCGAACAACAGAATGTCGTATGAGAAACCTTCTGTCGACACTAAAATACTTCTATGGATGAAGTATTT
TGATATCCACATGGAGGAGGGAACCTCGGTGAATTCCCACATTAATGAGCTTACCAATATCTTGAACAAATTAGAAGGGATGGGTGTCAAGATTGAGGAAGAGATGAAGG
CTATGATGCTGTTGACATATTTCCCTGACAGTTGGGAGACGATGAAGACCGCGGTGTCGAATTCGCTAGGGGAAAATAGCTTGAAAGTTTTAGCTATTTGTGATGCCGCC
TTATTTGAGGAAGCCCAGAGAAAATTAGGAAAAATGTGCATCTACTTCAGGGGTAGAAAACGGGGTTGA
Protein sequenceShow/hide protein sequence
MTDKDWNEMDEQAVANNRMSYEKPSVDTKILLWMKYFDIHMEEGTSVNSHINELTNILNKLEGMGVKIEEEMKAMMLLTYFPDSWETMKTAVSNSLGENSLKVLAICDAA
LFEEAQRKLGKMCIYFRGRKRG