; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc04g25450 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g25450
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionTy3-gypsy retrotransposon protein
Genome locationchr4:18478921..18480687
RNA-Seq ExpressionMoc04g25450
SyntenyMoc04g25450
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022159413.1 uncharacterized protein LOC111025834 [Momordica charantia]5.7e-17285.52Show/hide
Query:  MITNTIRAQYGGPSQSSLLYSKPYTKRINDMRMPAGYQPPKFQHFDGKGNPKQHIAHFVETCENDGTRGDQLVKQFVRTLKGNAFDWYTNLEPETIESWE
        MITNTIRAQYGG SQSSLLYSKPYTKRIND+RMPAGYQPPKFQHFDGKGNPKQHIAHFVETCEN GTRGDQLVKQFVRTLKGNAFDWYT+LEPETIESWE
Subjt:  MITNTIRAQYGGPSQSSLLYSKPYTKRINDMRMPAGYQPPKFQHFDGKGNPKQHIAHFVETCENDGTRGDQLVKQFVRTLKGNAFDWYTNLEPETIESWE

Query:  QLEREFLNCFYSTKRTVSMMELTNSKQRKGEPVVEYINQWRALGLDCKDRLTELSAVELCTQGMHWELLYILQGIKPCTFEELTTRAHDMELSIANRGSK
        QLE+EFLN FYSTKRTVSMMELTNS+QRKGEPVVEYIN+WRAL LDCKDRLTELSAVELCTQGMHWELLYILQ IKP TFEEL TRAHDMELSIANRGSK
Subjt:  QLEREFLNCFYSTKRTVSMMELTNSKQRKGEPVVEYINQWRALGLDCKDRLTELSAVELCTQGMHWELLYILQGIKPCTFEELTTRAHDMELSIANRGSK

Query:  DSLVLDLEKESKSVEKTSNESFGVNTISPKLFSIIKGKRIEKQKGNKKRWLSLKKRQEKVYPFPNSDIPYMLEQLLETRLIVLPECIQPEQMT-------
        DSLVLDLEKESKSVEKTSNE FGVNTISPKLFS IKGKRIEKQKGN+K WLSLK+RQEKVYPFPNSDIPYMLEQLLETRLIVLPECI+PE+M+       
Subjt:  DSLVLDLEKESKSVEKTSNESFGVNTISPKLFSIIKGKRIEKQKGNKKRWLSLKKRQEKVYPFPNSDIPYMLEQLLETRLIVLPECIQPEQMT-------

Query:  -------------------------LEGKIELDFNEIAQSNHAAVTTNIGSQTPQSLFYNKGINLI
                                  EGKIELDFNEIAQSNHAAVTTNIGSQTPQSLFYNKGINLI
Subjt:  -------------------------LEGKIELDFNEIAQSNHAAVTTNIGSQTPQSLFYNKGINLI

XP_031735972.1 uncharacterized protein LOC116401693 [Cucumis sativus]5.2e-15755.4Show/hide
Query:  MMLQETTIENEF-LVNHNPLFDFNPDIVSVMMTDASTIDEKMAEMEKKLAALMKTVEERDYEIASLKNQIENRNFTESNQTLAIKINDKGKTIAQENQ-S
        ++++E  + N++   +   L + +PD++SVMM D + ++  MAEME+K+  LMK V+ERD+EIA+LK Q++ R   ES+QT  +K++DKGK + QENQ  
Subjt:  MMLQETTIENEF-LVNHNPLFDFNPDIVSVMMTDASTIDEKMAEMEKKLAALMKTVEERDYEIASLKNQIENRNFTESNQTLAIKINDKGKTIAQENQ-S

Query:  QYSTSIASLSVQQLQGMITNTIRAQYGGPSQSSLLYSKPYTKRINDMRMPAGYQPPKFQHFDGKGNPKQHIAHFVETCENDGTRGDQLVKQFVRTLKGNA
        Q STS+ASLSVQQLQ MITN+IRAQYGGPSQ+S +YSKPYTKRI+++RMP GYQPPKFQ FDGKGNPKQH+AHFVETCEN G+RGDQLV+QFVR+LKGNA
Subjt:  QYSTSIASLSVQQLQGMITNTIRAQYGGPSQSSLLYSKPYTKRINDMRMPAGYQPPKFQHFDGKGNPKQHIAHFVETCENDGTRGDQLVKQFVRTLKGNA

Query:  FDWYTNLEPETIESWEQLEREFLNCFYSTKRTVSMMELTNSKQRKGEPVVEYINQWRALGLDCKDRLTELSAVELCTQGMHWELLYILQGIKPCTFEELT
        F+WYT+LEPE+IESWEQLE+EFLN FYST+RTVSMMELTN+KQRKGEPV++YIN+WRAL LDCKDRLTELSAVE+CTQGMHW LLYILQGIKP TFEEL 
Subjt:  FDWYTNLEPETIESWEQLEREFLNCFYSTKRTVSMMELTNSKQRKGEPVVEYINQWRALGLDCKDRLTELSAVELCTQGMHWELLYILQGIKPCTFEELT

Query:  TRAHDMELSIANRGSKDSLVLDLEKESKS-------VEKTSNESFGVNTISPKLFSIIKGKRIEKQ-KGNKKRWLSLKKRQEKVYPFPNSDIPYMLEQLL
        TRAHDMELSIA+RG+KD LV +++K+ K        V+ TS ES  VNT +P  FS  K  R+EK+  G+++R L+LK+RQEKVYPFP+SDI  MLEQLL
Subjt:  TRAHDMELSIANRGSKDSLVLDLEKESKS-------VEKTSNESFGVNTISPKLFSIIKGKRIEKQ-KGNKKRWLSLKKRQEKVYPFPNSDIPYMLEQLL

Query:  ETRLIVLPECIQPEQ--------------------------------MTLEGKIELDFNEIAQSNHAAVTTNIGSQTPQSLFYNKGINLIRFGTLKPIYV
        E +LI LPEC +PEQ                                +  E +IELD  E+AQ+NHA VT  +   +   L + +  +L++FGT +PI V
Subjt:  ETRLIVLPECIQPEQ--------------------------------MTLEGKIELDFNEIAQSNHAAVTTNIGSQTPQSLFYNKGINLIRFGTLKPIYV

Query:  RSQQKTSRNTIKDVVKSVNQGEENWATVTRQKKQKQSFAQKKSSMLSKEHEHQGKKDSRKPKSER
        +  Q+ S    +   + + + +E W  VT +KK++    Q++S   S ++  +G K  +  K ++
Subjt:  RSQQKTSRNTIKDVVKSVNQGEENWATVTRQKKQKQSFAQKKSSMLSKEHEHQGKKDSRKPKSER

XP_031739134.1 uncharacterized protein LOC116402863 [Cucumis sativus]4.4e-15655.04Show/hide
Query:  MMLQETTIENEF-LVNHNPLFDFNPDIVSVMMTDASTIDEKMAEMEKKLAALMKTVEERDYEIASLKNQIENRNFTESNQTLAIKINDKGKTIAQENQ-S
        ++++E  + N++   +   L + +PD++SVMM D + ++  MAEME+K+  LMK V+ERD+EIA+LK Q++ R   ES+QT  +K++DKGK + QENQ  
Subjt:  MMLQETTIENEF-LVNHNPLFDFNPDIVSVMMTDASTIDEKMAEMEKKLAALMKTVEERDYEIASLKNQIENRNFTESNQTLAIKINDKGKTIAQENQ-S

Query:  QYSTSIASLSVQQLQGMITNTIRAQYGGPSQSSLLYSKPYTKRINDMRMPAGYQPPKFQHFDGKGNPKQHIAHFVETCENDGTRGDQLVKQFVRTLKGNA
        Q STS+ASLSVQQLQ MIT++IRAQYGGPSQ+S +YSKPYTKRI+++RMP GYQPPKFQ FDGKGNPKQH+AHFVETCEN G+RGDQLV+QFVR+LKGNA
Subjt:  QYSTSIASLSVQQLQGMITNTIRAQYGGPSQSSLLYSKPYTKRINDMRMPAGYQPPKFQHFDGKGNPKQHIAHFVETCENDGTRGDQLVKQFVRTLKGNA

Query:  FDWYTNLEPETIESWEQLEREFLNCFYSTKRTVSMMELTNSKQRKGEPVVEYINQWRALGLDCKDRLTELSAVELCTQGMHWELLYILQGIKPCTFEELT
        F+WYT+LEPE+IESWEQLE+EFLN FYST+RTVSMMELTN+KQRKGEPV++YIN+WRAL LDCKDRLTELSAVE+CTQGMHW LLYILQGIKP TFEEL 
Subjt:  FDWYTNLEPETIESWEQLEREFLNCFYSTKRTVSMMELTNSKQRKGEPVVEYINQWRALGLDCKDRLTELSAVELCTQGMHWELLYILQGIKPCTFEELT

Query:  TRAHDMELSIANRGSKDSLVLDLEKESKS-------VEKTSNESFGVNTISPKLFSIIKGKRIEKQ-KGNKKRWLSLKKRQEKVYPFPNSDIPYMLEQLL
        TRAHDMELSIA+RG+KD LV +++K+ K        V+ T+ ES  VNT +P  FS  K  R+EK+  G+++R L+LK+RQEKVYPFP+SDI  MLEQLL
Subjt:  TRAHDMELSIANRGSKDSLVLDLEKESKS-------VEKTSNESFGVNTISPKLFSIIKGKRIEKQ-KGNKKRWLSLKKRQEKVYPFPNSDIPYMLEQLL

Query:  ETRLIVLPECIQPEQ--------------------------------MTLEGKIELDFNEIAQSNHAAVTTNIGSQTPQSLFYNKGINLIRFGTLKPIYV
        E +LI LPEC +PEQ                                +  E +IELD  E+AQ+NHA VT  +   +   L + +  +L++FGT +PI V
Subjt:  ETRLIVLPECIQPEQ--------------------------------MTLEGKIELDFNEIAQSNHAAVTTNIGSQTPQSLFYNKGINLIRFGTLKPIYV

Query:  RSQQKTSRNTIKDVVKSVNQGEENWATVTRQKKQKQSFAQKKSSMLSKEHEHQGKKDSRKPKSER
        +  Q+ S    +   + + + +E W  VT +KK++    Q++S   S ++  +G K  +  K ++
Subjt:  RSQQKTSRNTIKDVVKSVNQGEENWATVTRQKKQKQSFAQKKSSMLSKEHEHQGKKDSRKPKSER

XP_031740568.1 uncharacterized protein LOC116403508 [Cucumis sativus]2.0e-15655.22Show/hide
Query:  MMLQETTIENEF-LVNHNPLFDFNPDIVSVMMTDASTIDEKMAEMEKKLAALMKTVEERDYEIASLKNQIENRNFTESNQTLAIKINDKGKTIAQENQ-S
        ++++E  + N++   +   L + +PD++SVMM D + ++  MAEME+K+  LMK V+ERD+EIA+LK Q++ R   ES+QT  +K++DKGK + QENQ  
Subjt:  MMLQETTIENEF-LVNHNPLFDFNPDIVSVMMTDASTIDEKMAEMEKKLAALMKTVEERDYEIASLKNQIENRNFTESNQTLAIKINDKGKTIAQENQ-S

Query:  QYSTSIASLSVQQLQGMITNTIRAQYGGPSQSSLLYSKPYTKRINDMRMPAGYQPPKFQHFDGKGNPKQHIAHFVETCENDGTRGDQLVKQFVRTLKGNA
        Q STS+ASLSVQQLQ MIT++IRAQYGGPSQ+S +YSKPYTKRI+++RMP GYQPPKFQ FDGKGNPKQH+AHFVETCEN G+RGDQLV+QFVR+LKGNA
Subjt:  QYSTSIASLSVQQLQGMITNTIRAQYGGPSQSSLLYSKPYTKRINDMRMPAGYQPPKFQHFDGKGNPKQHIAHFVETCENDGTRGDQLVKQFVRTLKGNA

Query:  FDWYTNLEPETIESWEQLEREFLNCFYSTKRTVSMMELTNSKQRKGEPVVEYINQWRALGLDCKDRLTELSAVELCTQGMHWELLYILQGIKPCTFEELT
        F+WYT+LEPE+IESWEQLE+EFLN FYST+RTVSMMELTN+KQRKGEPV++YIN+WRAL LDCKDRLTELSAVE+CTQGMHW LLYILQGIKP TFEEL 
Subjt:  FDWYTNLEPETIESWEQLEREFLNCFYSTKRTVSMMELTNSKQRKGEPVVEYINQWRALGLDCKDRLTELSAVELCTQGMHWELLYILQGIKPCTFEELT

Query:  TRAHDMELSIANRGSKDSLVLDLEKESKS-------VEKTSNESFGVNTISPKLFSIIKGKRIEKQ-KGNKKRWLSLKKRQEKVYPFPNSDIPYMLEQLL
        TRAHDMELSIA+RG+KD LV +++K+ K        V+ TS ES  VNT +P  FS  K  R+EK+  G+++R L+LK+RQEKVYPFP+SDI  MLEQLL
Subjt:  TRAHDMELSIANRGSKDSLVLDLEKESKS-------VEKTSNESFGVNTISPKLFSIIKGKRIEKQ-KGNKKRWLSLKKRQEKVYPFPNSDIPYMLEQLL

Query:  ETRLIVLPECIQPEQ--------------------------------MTLEGKIELDFNEIAQSNHAAVTTNIGSQTPQSLFYNKGINLIRFGTLKPIYV
        E +LI LPEC +PEQ                                +  E +IELD  E+AQ+NHA VT  +   +   L + +  +L++FGT +PI V
Subjt:  ETRLIVLPECIQPEQ--------------------------------MTLEGKIELDFNEIAQSNHAAVTTNIGSQTPQSLFYNKGINLIRFGTLKPIYV

Query:  RSQQKTSRNTIKDVVKSVNQGEENWATVTRQKKQKQSFAQKKSSMLSKEHEHQGKKDSRKPKSER
        +  Q+ S    +   + + + +E W  VT +KK++    Q++S   S ++  +G K  +  K ++
Subjt:  RSQQKTSRNTIKDVVKSVNQGEENWATVTRQKKQKQSFAQKKSSMLSKEHEHQGKKDSRKPKSER

XP_031742199.1 uncharacterized protein LOC105435721 [Cucumis sativus]1.5e-15657.71Show/hide
Query:  MMLQETTIENEF-LVNHNPLFDFNPDIVSVMMTDASTIDEKMAEMEKKLAALMKTVEERDYEIASLKNQIENRNFTESNQTLAIKINDKGKTIAQENQ-S
        ++++E  + N++   +   L + +PD++SVMM D + ++  MAEME+K+  LMK V+ERD+EIA+LK Q++ R   ES+QT  +K++DKGK + QENQ  
Subjt:  MMLQETTIENEF-LVNHNPLFDFNPDIVSVMMTDASTIDEKMAEMEKKLAALMKTVEERDYEIASLKNQIENRNFTESNQTLAIKINDKGKTIAQENQ-S

Query:  QYSTSIASLSVQQLQGMITNTIRAQYGGPSQSSLLYSKPYTKRINDMRMPAGYQPPKFQHFDGKGNPKQHIAHFVETCENDGTRGDQLVKQFVRTLKGNA
        Q STS+ASLSVQQLQ MITN+IRAQYGGPSQ+S +YSKPYTKRI+++RMP GYQPPKFQ FDGKGNPKQH+AHFVETCEN G+RGDQLV+QFVR+LKGNA
Subjt:  QYSTSIASLSVQQLQGMITNTIRAQYGGPSQSSLLYSKPYTKRINDMRMPAGYQPPKFQHFDGKGNPKQHIAHFVETCENDGTRGDQLVKQFVRTLKGNA

Query:  FDWYTNLEPETIESWEQLEREFLNCFYSTKRTVSMMELTNSKQRKGEPVVEYINQWRALGLDCKDRLTELSAVELCTQGMHWELLYILQGIKPCTFEELT
        F+WYT+LEPE+IESWEQLE+EFLN FYST+RTVSMMELTN+KQRKGEPV++YIN+WRAL LDCKDRLTELSAVE+CTQGMHW LLYILQGIKP TFEEL 
Subjt:  FDWYTNLEPETIESWEQLEREFLNCFYSTKRTVSMMELTNSKQRKGEPVVEYINQWRALGLDCKDRLTELSAVELCTQGMHWELLYILQGIKPCTFEELT

Query:  TRAHDMELSIANRGSKDSLVLDLEKESKS-------VEKTSNESFGVNTISPKLFSIIKGKRIEKQ-KGNKKRWLSLKKRQEKVYPFPNSDIPYMLEQLL
        TRAHDMELSIA+RG+KD LV +++K+ K        V+ TS ES  VNT +P  FS  K  R+EK+  G+++R L+LK+RQEKVYPFP+SDI  MLEQLL
Subjt:  TRAHDMELSIANRGSKDSLVLDLEKESKS-------VEKTSNESFGVNTISPKLFSIIKGKRIEKQ-KGNKKRWLSLKKRQEKVYPFPNSDIPYMLEQLL

Query:  ETRLIVLPECIQPEQ--------------------------------MTLEGKIELDFNEIAQSNHAAVTTNIGSQTPQSLFYNKGINLIRFGTLKPIYV
        E +LI LPEC +PEQ                                +  E +IELD  E+AQ+NHA VT  +   +   L + +  +L++FGT +PI V
Subjt:  ETRLIVLPECIQPEQ--------------------------------MTLEGKIELDFNEIAQSNHAAVTTNIGSQTPQSLFYNKGINLIRFGTLKPIYV

Query:  RSQQKTSRNTIKDVVKSVNQGEENW
        +  Q+ S    +   + + + +E W
Subjt:  RSQQKTSRNTIKDVVKSVNQGEENW

TrEMBL top hitse value%identityAlignment
A0A5A7TST6 Ty3-gypsy retrotransposon protein1.3e-14256.63Show/hide
Query:  DIVSVMMTDASTIDEKMAEMEKKLAALMKTVEERDYEIASLKNQIENRNFTESNQTLAIKINDKGKTIAQENQSQYSTSIASLSVQQLQGMITNTIRAQY
        +I+SVM+T+  T + +MAE+EKK+  LMK VEERDYEIA LKN IE+R+  ES+    +K  DKGK + QE+Q Q STSIASLSVQQLQ MI ++I+ QY
Subjt:  DIVSVMMTDASTIDEKMAEMEKKLAALMKTVEERDYEIASLKNQIENRNFTESNQTLAIKINDKGKTIAQENQSQYSTSIASLSVQQLQGMITNTIRAQY

Query:  GGPSQSSLLYSKPYTKRINDMRMPAGYQPPKFQHFDGKGNPKQHIAHFVETCENDGTRGDQLVKQFVRTLKGNAFDWYTNLEPETIESWEQLEREFLNCF
        GGP+Q+  LYSKPYTKRI+++RM  GYQPPKFQ FDGKGNPKQH+AHF+ETCE  GTRGD LVKQFVRTLKGNAFDWY +LEPE+I++WEQLER+FLN F
Subjt:  GGPSQSSLLYSKPYTKRINDMRMPAGYQPPKFQHFDGKGNPKQHIAHFVETCENDGTRGDQLVKQFVRTLKGNAFDWYTNLEPETIESWEQLEREFLNCF

Query:  YSTKRTVSMMELTNSKQRKGEPVVEYINQWRALGLDCKDRLTELSAVELCTQGMHWELLYILQGIKPCTFEELTTRAHDMELSIANRGSKDSLV------
        YST+R VSMMELTN++Q+KGE V++YIN+WRAL LDCKDRLTELSAVE+CTQGMHW LLYILQGIKP TFEEL TRAHDMELSI NR +KD L+      
Subjt:  YSTKRTVSMMELTNSKQRKGEPVVEYINQWRALGLDCKDRLTELSAVELCTQGMHWELLYILQGIKPCTFEELTTRAHDMELSIANRGSKDSLV------

Query:  -LDLEKESKSVEKTSNESFGVNTISPKLFSIIKGKRIE-KQKGNKKRWLSLKKRQEKVYPFPNSDIPYMLEQLLETRLIVLPECIQPEQ-----------
          +L+   K       ES  V+    K FS  K  +IE K  GN+KR  +LK+RQEKVYPFP+SD+  MLEQLLE +LI LPEC +PEQ           
Subjt:  -LDLEKESKSVEKTSNESFGVNTISPKLFSIIKGKRIE-KQKGNKKRWLSLKKRQEKVYPFPNSDIPYMLEQLLETRLIVLPECIQPEQ-----------

Query:  ---------------------MTLEGKIELDFNEIAQSNHAA--VTTNIGSQTPQSLFYNKGINLIRFGTLKPIYVRSQQKTSRNTIKDVVKSVNQGEEN
                             +  E KIELD +E+AQ+NH A  +T+N+    P +   ++  +LI+F T  PI V  QQ+      ++         E 
Subjt:  ---------------------MTLEGKIELDFNEIAQSNHAA--VTTNIGSQTPQSLFYNKGINLIRFGTLKPIYVRSQQKTSRNTIKDVVKSVNQGEEN

Query:  WATVT
        W TVT
Subjt:  WATVT

A0A5A7TZU9 Ribonuclease H8.4e-15356.06Show/hide
Query:  ENEFLVNHNPLFDFN------PDIVSVMMTDASTIDEKMAEMEKKLAALMKTVEERDYEIASLKNQIENRNFTESNQTLAIKINDKGKTIAQENQSQYST
        EN  +  HN L + +      P+I+SVM+TD  T +++MAE+EKK+  LMK VEERD+EIA LKN IE+R+  ES+ T  IK  +KGK I QE+Q Q ST
Subjt:  ENEFLVNHNPLFDFN------PDIVSVMMTDASTIDEKMAEMEKKLAALMKTVEERDYEIASLKNQIENRNFTESNQTLAIKINDKGKTIAQENQSQYST

Query:  SIASLSVQQLQGMITNTIRAQYGGPSQSSLLYSKPYTKRINDMRMPAGYQPPKFQHFDGKGNPKQHIAHFVETCENDGTRGDQLVKQFVRTLKGNAFDWY
        SIASLSVQQLQ MI N+I+ QYGGP+Q+  LYSKPYTKRI++MRMP GYQPPKFQ FDGKGNPKQH+AHF+ETCE  GTRGD LVKQFVRTLKGNAFDWY
Subjt:  SIASLSVQQLQGMITNTIRAQYGGPSQSSLLYSKPYTKRINDMRMPAGYQPPKFQHFDGKGNPKQHIAHFVETCENDGTRGDQLVKQFVRTLKGNAFDWY

Query:  TNLEPETIESWEQLEREFLNCFYSTKRTVSMMELTNSKQRKGEPVVEYINQWRALGLDCKDRLTELSAVELCTQGMHWELLYILQGIKPCTFEELTTRAH
        T+LEPE+I+SWEQLER+FLN FYST+R VSM+ELT +KQRKGEPV++YIN+WRAL LDCKDRLTELSAVE+CTQGMHW LLYILQGIKP TFEEL TRAH
Subjt:  TNLEPETIESWEQLEREFLNCFYSTKRTVSMMELTNSKQRKGEPVVEYINQWRALGLDCKDRLTELSAVELCTQGMHWELLYILQGIKPCTFEELTTRAH

Query:  DMELSIANRGSKDSLVLDLEKESKSVEKT-------SNESFGVNTISPKLFSIIKGKRIEK-QKGNKKRWLSLKKRQEKVYPFPNSDIPYMLEQLLETRL
        DMELSIANRG+ D LV ++ KE K V+ T       + E+  V+T   KL S  K K++EK Q   +KR  +LK+RQEKVYPFP+SD+P ML+QLLE +L
Subjt:  DMELSIANRGSKDSLVLDLEKESKSVEKT-------SNESFGVNTISPKLFSIIKGKRIEK-QKGNKKRWLSLKKRQEKVYPFPNSDIPYMLEQLLETRL

Query:  IVLPECIQPEQM--------------------------------TLEGKIELDFNEIAQSNHAAVTTNIGSQTPQSLFYNKGINLIRFGTLKPIYVRSQQ
        I LPEC +P +M                                 L+ KIEL+ +++AQ+NHAAV     S+       +   +LI+FG+L+P+ + S  
Subjt:  IVLPECIQPEQM--------------------------------TLEGKIELDFNEIAQSNHAAVTTNIGSQTPQSLFYNKGINLIRFGTLKPIYVRSQQ

Query:  KTSRNT------IKDVVKSVNQGEENWATVTRQKKQKQSFAQKKSSMLSKEHEHQGKKDSRKP-KSERK
        +  +N        K+  K V+  EE W  VTR+KK+KQSF+QK+S    + +  +GK   R   K+ RK
Subjt:  KTSRNT------IKDVVKSVNQGEENWATVTRQKKQKQSFAQKKSSMLSKEHEHQGKKDSRKP-KSERK

A0A5A7UWA5 Retrotransposon gag protein1.0e-14251.01Show/hide
Query:  LREHQTPPVVANKVMMLQETTIENEFLVNHNPLFDFNP------------DIVSVMMTDASTIDEKMAEMEKKLAALMKTVEERDYEIASLKNQIENRNF
        ++E +   V+  K +     + +   ++  NPLF+ +             ++VSVMM D  T +  MAE+EKK+  LMK VEE+D+EIA+LK+Q++    
Subjt:  LREHQTPPVVANKVMMLQETTIENEFLVNHNPLFDFNP------------DIVSVMMTDASTIDEKMAEMEKKLAALMKTVEERDYEIASLKNQIENRNF

Query:  TESNQTLAIKINDKGKTIAQENQ-SQYSTSIASLSVQQLQGMITNTIRAQYGGPSQSSLLYSKPYTKRINDMRMPAGYQPPKFQHFDGKGNPKQHIAHFV
         ES+QT  +K  DKGK + Q+NQ  Q S S+ASL V QLQ  I N+IRAQYGGPSQ+S +YSKPYTKRI+++RMP GYQP KFQ FDGKGNPKQHIAHFV
Subjt:  TESNQTLAIKINDKGKTIAQENQ-SQYSTSIASLSVQQLQGMITNTIRAQYGGPSQSSLLYSKPYTKRINDMRMPAGYQPPKFQHFDGKGNPKQHIAHFV

Query:  ETCENDGTRGDQLVKQFVRTLKGNAFDWYTNLEPETIESWEQLEREFLNCFYSTKRTVSMMELTNSKQRKGEPVVEYINQWRALGLDCKDRLTELSAVEL
        ETC+N G+RGDQLV+QFVR+LKGNAF+WYT+LEPE I+SWEQLE EFLN FY+T+R VSMMELTN+KQRKGEPV++YINQWRAL LDCKD+LTELSAVE+
Subjt:  ETCENDGTRGDQLVKQFVRTLKGNAFDWYTNLEPETIESWEQLEREFLNCFYSTKRTVSMMELTNSKQRKGEPVVEYINQWRALGLDCKDRLTELSAVEL

Query:  CTQGMHWELLYILQGIKPCTFEELTTRAHDMELSIANRGSKDSLVL-------DLEKESKSVEKTSNESFGVNTISPKLFSIIK-GKRIEKQKGNKKRWL
        CTQGMHWELLYILQGIKP TFEEL TR HDMELSIANRG+KD LV        ++    K      NES  V     K FS  K  K      G++KR  
Subjt:  CTQGMHWELLYILQGIKPCTFEELTTRAHDMELSIANRGSKDSLVL-------DLEKESKSVEKTSNESFGVNTISPKLFSIIK-GKRIEKQKGNKKRWL

Query:  SLKKRQEKVYPFPNSDIPYMLEQLLETRLIVLPECIQPEQ--------------------------------MTLEGKIELDFNEIAQSNHAAVTTNIGS
        +L++RQ+KVYPFP+SD+  MLEQL+E +LI  PEC +P+Q                                +  E KIEL+ +E+AQ+NH AV     S
Subjt:  SLKKRQEKVYPFPNSDIPYMLEQLLETRLIVLPECIQPEQ--------------------------------MTLEGKIELDFNEIAQSNHAAVTTNIGS

Query:  QTPQSLFYNKGINLIRFGTLKPIYVRSQQKT-SRNTIKDVVKSVNQGEENWATVTRQKKQKQSFAQKKSSMLSK------EHEHQGKKDSR--KPK
         +P  L Y++  +LI+FGT +PI +R QQKT + N+      S ++GEE W  V  +K+++ S  Q  S    K       H+ +G+++ +  KPK
Subjt:  QTPQSLFYNKGINLIRFGTLKPIYVRSQQKT-SRNTIKDVVKSVNQGEENWATVTRQKKQKQSFAQKKSSMLSK------EHEHQGKKDSR--KPK

A0A5D3BX77 Retrotransposon gag protein3.0e-14250Show/hide
Query:  TYGCSDEFQLREHQTPPVVANKVMMLQETTIENEFLVNHNPLFDFN-------------PDIVSVMMTDASTIDEKMAEMEKKLAALMKTVEERDYEIAS
        T+ CS E Q  E   P  VA  +        +   ++  NP  D +             P+I+SVM+T+  T + +MAE+EKK+  LMK VEERDYEIA 
Subjt:  TYGCSDEFQLREHQTPPVVANKVMMLQETTIENEFLVNHNPLFDFN-------------PDIVSVMMTDASTIDEKMAEMEKKLAALMKTVEERDYEIAS

Query:  LKNQIENRNFTESNQTLAIKINDKGKTIAQENQSQYSTSIASLSVQQLQGMITNTIRAQYGGPSQSSLLYSKPYTKRINDMRMPAGYQPPKFQHFDGKGN
        LKN IE+R+  ES+    +K  DKGK + QE+Q Q STSIASLSVQQLQ MI ++I+ QYGGP+Q+  LYSKPYTKRI+++RMP GYQPPKFQ FDGKGN
Subjt:  LKNQIENRNFTESNQTLAIKINDKGKTIAQENQSQYSTSIASLSVQQLQGMITNTIRAQYGGPSQSSLLYSKPYTKRINDMRMPAGYQPPKFQHFDGKGN

Query:  PKQHIAHFVETCENDGTRGDQLVKQFVRTLKGNAFDWYTNLEPETIESWEQLEREFLNCFYSTKRTVSMMELTNSKQRKGEPVVEYINQWRALGLDCKDR
        PKQH+AHF+ETCE  GTRGD LVKQFVRTLKGNAFD Y +LEPE+I++WEQLER+FLN FYST+R VSMMELTN++Q+KGE V++YIN+WRAL LDCKDR
Subjt:  PKQHIAHFVETCENDGTRGDQLVKQFVRTLKGNAFDWYTNLEPETIESWEQLEREFLNCFYSTKRTVSMMELTNSKQRKGEPVVEYINQWRALGLDCKDR

Query:  LTELSAVELCTQGMHWELLYILQGIKPCTFEELTTRAHDMELSIANRGSKDSLV-------LDLEKESKSVEKTSNESFGVNTISPKLFSIIKGKRIE-K
        LTELSAVE+CTQGMHW LLYILQGIKP TFEEL TRAHDMELSI NRG+KD L+        +L    K       ES  V+    K FS  K  +IE K
Subjt:  LTELSAVELCTQGMHWELLYILQGIKPCTFEELTTRAHDMELSIANRGSKDSLV-------LDLEKESKSVEKTSNESFGVNTISPKLFSIIKGKRIE-K

Query:  QKGNKKRWLSLKKRQEKVYPFPNSDIPYMLEQLLETRLIVLPECIQPEQ--------------------------------MTLEGKIELDFNEIAQSNH
          G++KR  +LK+RQEKVYPF +SD+  MLEQLLE +LI LP+C +P+Q                                +  E KIEL+ +E+AQ+NH
Subjt:  QKGNKKRWLSLKKRQEKVYPFPNSDIPYMLEQLLETRLIVLPECIQPEQ--------------------------------MTLEGKIELDFNEIAQSNH

Query:  AAV--TTNIGSQTPQSLFYNKGINLIRFGT-----LKPIYVRSQQKTSRNTIKDVVKSVNQGEENWATVTRQKKQKQSFAQKKSSMLSK------EHEHQ
         A+  T+N+    P +   ++  +LI+FGT      + + + SQ K +              +E W TVTRQK ++ +  QK+S    K       H+ +
Subjt:  AAV--TTNIGSQTPQSLFYNKGINLIRFGT-----LKPIYVRSQQKTSRNTIKDVVKSVNQGEENWATVTRQKKQKQSFAQKKSSMLSK------EHEHQ

Query:  GKKDSR
        G+++ +
Subjt:  GKKDSR

A0A6J1DYQ8 uncharacterized protein LOC1110258342.8e-17285.52Show/hide
Query:  MITNTIRAQYGGPSQSSLLYSKPYTKRINDMRMPAGYQPPKFQHFDGKGNPKQHIAHFVETCENDGTRGDQLVKQFVRTLKGNAFDWYTNLEPETIESWE
        MITNTIRAQYGG SQSSLLYSKPYTKRIND+RMPAGYQPPKFQHFDGKGNPKQHIAHFVETCEN GTRGDQLVKQFVRTLKGNAFDWYT+LEPETIESWE
Subjt:  MITNTIRAQYGGPSQSSLLYSKPYTKRINDMRMPAGYQPPKFQHFDGKGNPKQHIAHFVETCENDGTRGDQLVKQFVRTLKGNAFDWYTNLEPETIESWE

Query:  QLEREFLNCFYSTKRTVSMMELTNSKQRKGEPVVEYINQWRALGLDCKDRLTELSAVELCTQGMHWELLYILQGIKPCTFEELTTRAHDMELSIANRGSK
        QLE+EFLN FYSTKRTVSMMELTNS+QRKGEPVVEYIN+WRAL LDCKDRLTELSAVELCTQGMHWELLYILQ IKP TFEEL TRAHDMELSIANRGSK
Subjt:  QLEREFLNCFYSTKRTVSMMELTNSKQRKGEPVVEYINQWRALGLDCKDRLTELSAVELCTQGMHWELLYILQGIKPCTFEELTTRAHDMELSIANRGSK

Query:  DSLVLDLEKESKSVEKTSNESFGVNTISPKLFSIIKGKRIEKQKGNKKRWLSLKKRQEKVYPFPNSDIPYMLEQLLETRLIVLPECIQPEQMT-------
        DSLVLDLEKESKSVEKTSNE FGVNTISPKLFS IKGKRIEKQKGN+K WLSLK+RQEKVYPFPNSDIPYMLEQLLETRLIVLPECI+PE+M+       
Subjt:  DSLVLDLEKESKSVEKTSNESFGVNTISPKLFSIIKGKRIEKQKGNKKRWLSLKKRQEKVYPFPNSDIPYMLEQLLETRLIVLPECIQPEQMT-------

Query:  -------------------------LEGKIELDFNEIAQSNHAAVTTNIGSQTPQSLFYNKGINLI
                                  EGKIELDFNEIAQSNHAAVTTNIGSQTPQSLFYNKGINLI
Subjt:  -------------------------LEGKIELDFNEIAQSNHAAVTTNIGSQTPQSLFYNKGINLI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTAATCTTCATATGGGTCATATCACCTATGGTTGCTCTGATGAATTCCAACTACGGGAACATCAAACTCCTCCTGTTGTTGCAAACAAAGTAATGATGCTGCAAGA
AACAACTATTGAAAATGAGTTTCTTGTTAATCATAACCCCTTATTTGATTTTAATCCTGACATTGTCTCTGTTATGATGACTGATGCAAGCACTATAGATGAAAAAATGG
CTGAAATGGAAAAGAAGCTCGCTGCATTGATGAAGACAGTGGAAGAAAGAGATTATGAAATTGCTTCCTTGAAGAATCAGATTGAAAACAGAAATTTTACTGAGTCGAAT
CAAACCCTTGCTATTAAGATAAATGACAAGGGAAAGACTATTGCTCAAGAAAATCAATCGCAATATTCCACTTCGATCGCTTCGCTGTCTGTTCAACAGCTCCAAGGTAT
GATCACGAACACGATCAGAGCGCAATACGGCGGACCTTCTCAAAGCTCCCTCTTGTATTCTAAGCCATATACTAAGAGGATTAATGATATGAGAATGCCTGCTGGATACC
AACCTCCAAAATTCCAGCATTTCGATGGGAAGGGCAATCCCAAACAACATATTGCTCACTTCGTCGAAACTTGTGAGAATGATGGTACAAGAGGTGATCAGTTGGTCAAG
CAGTTCGTCCGAACGTTAAAGGGAAACGCCTTTGACTGGTATACTAATCTCGAGCCTGAAACGATCGAGAGTTGGGAACAGCTTGAAAGAGAATTCCTAAATTGCTTTTA
CAGTACGAAGAGAACCGTCAGCATGATGGAGCTCACGAACTCCAAACAAAGAAAAGGCGAACCGGTTGTTGAATATATCAACCAATGGAGAGCTCTAGGTCTTGATTGTA
AAGATAGGCTTACTGAACTATCCGCTGTCGAATTATGCACTCAAGGAATGCATTGGGAACTTCTTTACATCCTTCAAGGTATAAAACCTTGCACCTTTGAAGAGCTAACA
ACTCGTGCTCACGATATGGAGCTAAGCATTGCTAATCGAGGAAGTAAGGATTCTTTAGTGCTGGACTTAGAGAAAGAAAGCAAAAGTGTTGAGAAAACTTCAAATGAGTC
TTTTGGTGTAAACACAATCTCGCCTAAGTTGTTTTCAATAATAAAAGGAAAGAGAATTGAGAAGCAAAAAGGAAATAAGAAAAGATGGCTAAGCTTGAAAAAAAGGCAAG
AAAAAGTCTATCCTTTTCCTAATTCCGACATCCCTTATATGTTGGAACAATTACTGGAAACACGATTGATTGTACTTCCAGAGTGTATACAACCAGAACAAATGACTCTA
GAAGGAAAGATTGAGCTGGATTTCAATGAAATAGCTCAATCAAATCACGCTGCAGTAACAACAAATATAGGCAGCCAAACACCTCAAAGTCTATTCTACAATAAGGGGAT
AAACTTGATCCGATTTGGAACGTTGAAGCCTATATATGTTCGCTCTCAACAGAAGACTTCAAGAAATACCATTAAAGATGTTGTCAAATCTGTCAATCAGGGAGAAGAAA
ACTGGGCTACTGTGACTCGTCAGAAGAAACAAAAACAAAGTTTTGCTCAGAAGAAGTCATCTATGCTCAGCAAAGAGCATGAACACCAAGGAAAGAAGGATTCAAGGAAG
CCTAAATCAGAGAGGAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTAATCTTCATATGGGTCATATCACCTATGGTTGCTCTGATGAATTCCAACTACGGGAACATCAAACTCCTCCTGTTGTTGCAAACAAAGTAATGATGCTGCAAGA
AACAACTATTGAAAATGAGTTTCTTGTTAATCATAACCCCTTATTTGATTTTAATCCTGACATTGTCTCTGTTATGATGACTGATGCAAGCACTATAGATGAAAAAATGG
CTGAAATGGAAAAGAAGCTCGCTGCATTGATGAAGACAGTGGAAGAAAGAGATTATGAAATTGCTTCCTTGAAGAATCAGATTGAAAACAGAAATTTTACTGAGTCGAAT
CAAACCCTTGCTATTAAGATAAATGACAAGGGAAAGACTATTGCTCAAGAAAATCAATCGCAATATTCCACTTCGATCGCTTCGCTGTCTGTTCAACAGCTCCAAGGTAT
GATCACGAACACGATCAGAGCGCAATACGGCGGACCTTCTCAAAGCTCCCTCTTGTATTCTAAGCCATATACTAAGAGGATTAATGATATGAGAATGCCTGCTGGATACC
AACCTCCAAAATTCCAGCATTTCGATGGGAAGGGCAATCCCAAACAACATATTGCTCACTTCGTCGAAACTTGTGAGAATGATGGTACAAGAGGTGATCAGTTGGTCAAG
CAGTTCGTCCGAACGTTAAAGGGAAACGCCTTTGACTGGTATACTAATCTCGAGCCTGAAACGATCGAGAGTTGGGAACAGCTTGAAAGAGAATTCCTAAATTGCTTTTA
CAGTACGAAGAGAACCGTCAGCATGATGGAGCTCACGAACTCCAAACAAAGAAAAGGCGAACCGGTTGTTGAATATATCAACCAATGGAGAGCTCTAGGTCTTGATTGTA
AAGATAGGCTTACTGAACTATCCGCTGTCGAATTATGCACTCAAGGAATGCATTGGGAACTTCTTTACATCCTTCAAGGTATAAAACCTTGCACCTTTGAAGAGCTAACA
ACTCGTGCTCACGATATGGAGCTAAGCATTGCTAATCGAGGAAGTAAGGATTCTTTAGTGCTGGACTTAGAGAAAGAAAGCAAAAGTGTTGAGAAAACTTCAAATGAGTC
TTTTGGTGTAAACACAATCTCGCCTAAGTTGTTTTCAATAATAAAAGGAAAGAGAATTGAGAAGCAAAAAGGAAATAAGAAAAGATGGCTAAGCTTGAAAAAAAGGCAAG
AAAAAGTCTATCCTTTTCCTAATTCCGACATCCCTTATATGTTGGAACAATTACTGGAAACACGATTGATTGTACTTCCAGAGTGTATACAACCAGAACAAATGACTCTA
GAAGGAAAGATTGAGCTGGATTTCAATGAAATAGCTCAATCAAATCACGCTGCAGTAACAACAAATATAGGCAGCCAAACACCTCAAAGTCTATTCTACAATAAGGGGAT
AAACTTGATCCGATTTGGAACGTTGAAGCCTATATATGTTCGCTCTCAACAGAAGACTTCAAGAAATACCATTAAAGATGTTGTCAAATCTGTCAATCAGGGAGAAGAAA
ACTGGGCTACTGTGACTCGTCAGAAGAAACAAAAACAAAGTTTTGCTCAGAAGAAGTCATCTATGCTCAGCAAAGAGCATGAACACCAAGGAAAGAAGGATTCAAGGAAG
CCTAAATCAGAGAGGAAATAA
Protein sequenceShow/hide protein sequence
MSNLHMGHITYGCSDEFQLREHQTPPVVANKVMMLQETTIENEFLVNHNPLFDFNPDIVSVMMTDASTIDEKMAEMEKKLAALMKTVEERDYEIASLKNQIENRNFTESN
QTLAIKINDKGKTIAQENQSQYSTSIASLSVQQLQGMITNTIRAQYGGPSQSSLLYSKPYTKRINDMRMPAGYQPPKFQHFDGKGNPKQHIAHFVETCENDGTRGDQLVK
QFVRTLKGNAFDWYTNLEPETIESWEQLEREFLNCFYSTKRTVSMMELTNSKQRKGEPVVEYINQWRALGLDCKDRLTELSAVELCTQGMHWELLYILQGIKPCTFEELT
TRAHDMELSIANRGSKDSLVLDLEKESKSVEKTSNESFGVNTISPKLFSIIKGKRIEKQKGNKKRWLSLKKRQEKVYPFPNSDIPYMLEQLLETRLIVLPECIQPEQMTL
EGKIELDFNEIAQSNHAAVTTNIGSQTPQSLFYNKGINLIRFGTLKPIYVRSQQKTSRNTIKDVVKSVNQGEENWATVTRQKKQKQSFAQKKSSMLSKEHEHQGKKDSRK
PKSERK