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Moc04g25580 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g25580
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionBED-type domain-containing protein
Genome locationchr4:18585621..18586140
RNA-Seq ExpressionMoc04g25580
SyntenyMoc04g25580
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BBH03042.1 hypothetical protein Prudu_013798 [Prunus dulcis]1.0e-0541.94Show/hide
Query:  RCLF-VHYV-PLLATEQDLLDLRTTYHILDYVLICLPSEDEKINTPSPGWVSFYPQMFWNGVRLPLSLFVQAFLVFTGMDPAQLAPNGSEAFM
        R LF V Y+ P   TE++L  +R  YHI D V + +PS  E ++ P  G V+F+  M   GVRLPL   VQ  L   G  P Q  PN   A M
Subjt:  RCLF-VHYV-PLLATEQDLLDLRTTYHILDYVLICLPSEDEKINTPSPGWVSFYPQMFWNGVRLPLSLFVQAFLVFTGMDPAQLAPNGSEAFM

PQQ09484.1 uncharacterized protein Pyn_05761 [Prunus yedoensis var. nudiflora]6.4e-0840.96Show/hide
Query:  DLLD-LRTTYHILDYVLICLPSEDEKINTPSPGWVSFYPQMFWNGVRLPLSLFVQAFLVFTGMDPAQLAPNGSEAFMELAILW
        DLLD +R  Y +   V+  LP  D+  + P  GWV+ Y +MF NG+RLPL  FVQ ++ F G+ P Q+ PN       + +LW
Subjt:  DLLD-LRTTYHILDYVLICLPSEDEKINTPSPGWVSFYPQMFWNGVRLPLSLFVQAFLVFTGMDPAQLAPNGSEAFMELAILW

XP_022159063.1 uncharacterized protein LOC111025502, partial [Momordica charantia]1.1e-1047.25Show/hide
Query:  PLLATEQDLLDLRTTYHILDYVLICLPSEDEKINTPSPGWVSFYPQMFWNGVRLPLSLFVQAFLVFTGMDPAQLAPNGSEAFMELAIL-WL
        P    E  L  LR  + I + +L+ LP E E+ + P  GWV+ Y +MF  G+RLPL  FVQ FL  TG+ PAQ+APNG      LAIL WL
Subjt:  PLLATEQDLLDLRTTYHILDYVLICLPSEDEKINTPSPGWVSFYPQMFWNGVRLPLSLFVQAFLVFTGMDPAQLAPNGSEAFMELAIL-WL

XP_024033571.1 uncharacterized protein LOC112095697 [Citrus clementina]3.5e-0634.83Show/hide
Query:  SMARCLFVHYVPLLATEQDLLDLRTTYHILDYVLICLPSEDEKINTPSPGWVSFYPQMFWNGVRLPLSLFVQAFLVFTGMDPAQLAPNG
        ++A    ++ +  + T +DL+DLRT Y ILD + + +P + +  N P  G+V+ + + F  G+RLPL L+    L    + P QL PNG
Subjt:  SMARCLFVHYVPLLATEQDLLDLRTTYHILDYVLICLPSEDEKINTPSPGWVSFYPQMFWNGVRLPLSLFVQAFLVFTGMDPAQLAPNG

XP_024955606.1 uncharacterized protein At3g60930, chloroplastic-like [Citrus sinensis]1.1e-0735Show/hide
Query:  SMARCLFVHYVPLLATEQDLLDLRTTYHILDYVLICLPSEDEKINTPSPGWVSFYPQMFWNGVRLPLSLFVQAFLVFTGMDPAQLAPNGSEAFMELAILW
        ++A    +  +  + T +DL+DLRT Y ILD + + +P + +  N P  G V+ + + F  G+RLPL L+    L    + P+QL PNG      L ILW
Subjt:  SMARCLFVHYVPLLATEQDLLDLRTTYHILDYVLICLPSEDEKINTPSPGWVSFYPQMFWNGVRLPLSLFVQAFLVFTGMDPAQLAPNGSEAFMELAILW

TrEMBL top hitse value%identityAlignment
A0A314YW75 Uncharacterized protein3.1e-0840.96Show/hide
Query:  DLLD-LRTTYHILDYVLICLPSEDEKINTPSPGWVSFYPQMFWNGVRLPLSLFVQAFLVFTGMDPAQLAPNGSEAFMELAILW
        DLLD +R  Y +   V+  LP  D+  + P  GWV+ Y +MF NG+RLPL  FVQ ++ F G+ P Q+ PN       + +LW
Subjt:  DLLD-LRTTYHILDYVLICLPSEDEKINTPSPGWVSFYPQMFWNGVRLPLSLFVQAFLVFTGMDPAQLAPNGSEAFMELAILW

A0A6J1DXS5 uncharacterized protein LOC1110255025.1e-1147.25Show/hide
Query:  PLLATEQDLLDLRTTYHILDYVLICLPSEDEKINTPSPGWVSFYPQMFWNGVRLPLSLFVQAFLVFTGMDPAQLAPNGSEAFMELAIL-WL
        P    E  L  LR  + I + +L+ LP E E+ + P  GWV+ Y +MF  G+RLPL  FVQ FL  TG+ PAQ+APNG      LAIL WL
Subjt:  PLLATEQDLLDLRTTYHILDYVLICLPSEDEKINTPSPGWVSFYPQMFWNGVRLPLSLFVQAFLVFTGMDPAQLAPNGSEAFMELAIL-WL

A0A7N2LBY1 Uncharacterized protein2.9e-0638.37Show/hide
Query:  LRTTYHILDYVLICLPSEDEKINTPSPGWVSFYPQMFWNGVRLPLSLFVQAFLVFTGMDPAQLAPNGSEAFMELAILWLELGGAKR
        LRT + I D++ I LP ++EK  T     V  Y  MF  G+RLPL+   +    F G+  +Q+APN    F+   ILW  L G  R
Subjt:  LRTTYHILDYVLICLPSEDEKINTPSPGWVSFYPQMFWNGVRLPLSLFVQAFLVFTGMDPAQLAPNGSEAFMELAILWLELGGAKR

A0A7N2LCU7 Uncharacterized protein2.9e-0638.37Show/hide
Query:  LRTTYHILDYVLICLPSEDEKINTPSPGWVSFYPQMFWNGVRLPLSLFVQAFLVFTGMDPAQLAPNGSEAFMELAILWLELGGAKR
        LRT + I D++ I LP ++EK  T     V  Y  MF  G+RLPL+   +    F G+  +Q+APN    F+   ILW  L G  R
Subjt:  LRTTYHILDYVLICLPSEDEKINTPSPGWVSFYPQMFWNGVRLPLSLFVQAFLVFTGMDPAQLAPNGSEAFMELAILWLELGGAKR

A0A7N2LK74 Uncharacterized protein1.7e-0637.93Show/hide
Query:  DLRTTYHILDYVLICLPSEDEKINTPSPGWVSFYPQMFWNGVRLPLSLFVQAFLVFTGMDPAQLAPNGSEAFMELAILWLELGGAKR
        +LRT + I D++ I LP ++EK  T     V  Y  MF  G+RLPL+   +    F G+  +Q+APN    F+   ILW  L G  R
Subjt:  DLRTTYHILDYVLICLPSEDEKINTPSPGWVSFYPQMFWNGVRLPLSLFVQAFLVFTGMDPAQLAPNGSEAFMELAILWLELGGAKR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCGCCGCTGTTTCACAGGCGATCGCGTCCCTGATGCAGTTTTCCAAGTGGCAGTTCCTTTGCTTCCTTTCTGGATTGATTGCTTCCATGGCTCGCTGTCTATTCGT
CCACTACGTTCCATTGCTGGCCACCGAACAAGACCTTTTGGATCTTCGCACCACATACCACATCCTCGACTACGTTCTCATATGCCTCCCATCTGAGGACGAAAAAATAA
ATACCCCTTCGCCTGGTTGGGTGAGTTTCTACCCGCAGATGTTCTGGAATGGGGTCAGGCTTCCCCTCTCCCTTTTCGTCCAAGCGTTCCTGGTTTTTACCGGCATGGAT
CCAGCTCAACTAGCTCCTAACGGATCAGAAGCTTTTATGGAATTGGCCATCCTTTGGCTGGAATTGGGAGGGGCAAAGAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGCCCGCCGCTGTTTCACAGGCGATCGCGTCCCTGATGCAGTTTTCCAAGTGGCAGTTCCTTTGCTTCCTTTCTGGATTGATTGCTTCCATGGCTCGCTGTCTATTCGT
CCACTACGTTCCATTGCTGGCCACCGAACAAGACCTTTTGGATCTTCGCACCACATACCACATCCTCGACTACGTTCTCATATGCCTCCCATCTGAGGACGAAAAAATAA
ATACCCCTTCGCCTGGTTGGGTGAGTTTCTACCCGCAGATGTTCTGGAATGGGGTCAGGCTTCCCCTCTCCCTTTTCGTCCAAGCGTTCCTGGTTTTTACCGGCATGGAT
CCAGCTCAACTAGCTCCTAACGGATCAGAAGCTTTTATGGAATTGGCCATCCTTTGGCTGGAATTGGGAGGGGCAAAGAGATGA
Protein sequenceShow/hide protein sequence
MPAAVSQAIASLMQFSKWQFLCFLSGLIASMARCLFVHYVPLLATEQDLLDLRTTYHILDYVLICLPSEDEKINTPSPGWVSFYPQMFWNGVRLPLSLFVQAFLVFTGMD
PAQLAPNGSEAFMELAILWLELGGAKR