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Moc04g25650 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g25650
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr4:18605487..18606101
RNA-Seq ExpressionMoc04g25650
SyntenyMoc04g25650
Gene Ontology termsNA
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAA3016547.1 Hypothetical predicted protein, partial [Olea europaea subsp. europaea]2.9e-2035.58Show/hide
Query:  FKGPHLDKYDGSIDPVDHTTLYHDAIRQAGYNDAGQCRGFSRTLIDLARQWFQDLPPHSVESYQDLASKFVDQFHYSYTNRRTKVHLSSIKQKPGENMKA
        FK P + +YDG+IDP+++  +Y D +      DA  CR F +TL ++AR WF  L P+S+ S+ DL  KF   F  S   R+T   L  ++Q P E +++
Subjt:  FKGPHLDKYDGSIDPVDHTTLYHDAIRQAGYNDAGQCRGFSRTLIDLARQWFQDLPPHSVESYQDLASKFVDQFHYSYTNRRTKVHLSSIKQKPGENMKA

Query:  YVARFSNERLRVSNCNESVAPWALSQSIRERKLVRSLSEYLARSMTELTARINRHIAREEMLA
        ++  F+ ERL++ + + +VA   L+ +I+      SLS+   +S+TEL  R+ ++I  EE +A
Subjt:  YVARFSNERLRVSNCNESVAPWALSQSIRERKLVRSLSEYLARSMTELTARINRHIAREEMLA

XP_022858942.1 uncharacterized protein LOC111379733 [Olea europaea var. sylvestris]1.7e-2034.73Show/hide
Query:  MPKGFKGPHLDKYDGSIDPVDHTTLYHDAIRQAGYNDAGQCRGFSRTLIDLARQWFQDLPPHSVESYQDLASKFVDQFHYSYTNRRTKVHLSSIKQKPGE
        +P  FK P + +YDG+IDP++H  +Y D +      DA  C+ F +TL + A+ WF  L P+S+ S+ DLA KF   F  S   R     L  ++Q P E
Subjt:  MPKGFKGPHLDKYDGSIDPVDHTTLYHDAIRQAGYNDAGQCRGFSRTLIDLARQWFQDLPPHSVESYQDLASKFVDQFHYSYTNRRTKVHLSSIKQKPGE

Query:  NMKAYVARFSNERLRVSNCNESVAPWALSQSIRERKLVRSLSEYLARSMTELTARINRHIAREEMLA
         + +++ RF+ ERL++ + + + A  AL+ +I+ +    SLS+   +S+TEL  +  ++I  EE +A
Subjt:  NMKAYVARFSNERLRVSNCNESVAPWALSQSIRERKLVRSLSEYLARSMTELTARINRHIAREEMLA

XP_022888990.1 uncharacterized protein LOC111404411 [Olea europaea var. sylvestris]1.7e-2033.33Show/hide
Query:  MPKGFKGPHLDKYDGSIDPVDHTTLYHDAIRQAGYNDAGQCRGFSRTLIDLARQWFQDLPPHSVESYQDLASKFVDQFHYSYTNRRTKVHLSSIKQKPGE
        +P  FK P + +YDG+ D ++H  +Y D +      DA  C+ F +TL + AR WF  L  +S+ S+ DL  KF   F  S   ++T   L  ++Q+P E
Subjt:  MPKGFKGPHLDKYDGSIDPVDHTTLYHDAIRQAGYNDAGQCRGFSRTLIDLARQWFQDLPPHSVESYQDLASKFVDQFHYSYTNRRTKVHLSSIKQKPGE

Query:  NMKAYVARFSNERLRVSNCNESVAPWALSQSIRERKLVRSLSEYLARSMTELTARINRHIAREEMLAAQSL
         +++++ RF+ ERL++ + + + A  AL+ +I+      S+S+   +S+TEL  R  ++I  EE +A +SL
Subjt:  NMKAYVARFSNERLRVSNCNESVAPWALSQSIRERKLVRSLSEYLARSMTELTARINRHIAREEMLAAQSL

XP_022889188.1 uncharacterized protein LOC111404638 [Olea europaea var. sylvestris]4.9e-2034.34Show/hide
Query:  MPKGFKGPHLDKYDGSIDPVDHTTLYHDAIRQAGYNDAGQCRGFSRTLIDLARQWFQDLPPHSVESYQDLASKFVDQFHYSYTNRRTKVHLSSIKQKPGE
        +P  FK P + +YDG+ DP++H  +Y D +      +   C+ F +TL + AR WF  L P+S+ S+ DLA KF   F  S   R+T   L  ++Q P E
Subjt:  MPKGFKGPHLDKYDGSIDPVDHTTLYHDAIRQAGYNDAGQCRGFSRTLIDLARQWFQDLPPHSVESYQDLASKFVDQFHYSYTNRRTKVHLSSIKQKPGE

Query:  NMKAYVARFSNERLRVSNCNESVAPWALSQSIRERKLVRSLSEYLARSMTELTARINRHIAREEML
         ++ ++ RF+ ERL++ N + + A +AL+  +R      SLS+   +++ EL  R  ++I  EE L
Subjt:  NMKAYVARFSNERLRVSNCNESVAPWALSQSIRERKLVRSLSEYLARSMTELTARINRHIAREEML

XP_039683852.1 uncharacterized protein LOC112416600 [Medicago truncatula]3.7e-2033.54Show/hide
Query:  MPKGFKGPHLDKYDGSIDPVDHTTLYHDAIRQAGYNDAGQCRGFSRTLIDLARQWFQDLPPHSVESYQDLASKFVDQFHYSYTNRRTKVHLSSIKQKPGE
        +P  FK PHL  +DG  DP +H T+++  +   G  D+ +C+  + T  D A +W+  LP  S+ SYQD+  KF  QF  +   +     L +++Q P E
Subjt:  MPKGFKGPHLDKYDGSIDPVDHTTLYHDAIRQAGYNDAGQCRGFSRTLIDLARQWFQDLPPHSVESYQDLASKFVDQFHYSYTNRRTKVHLSSIKQKPGE

Query:  NMKAYVARFSNERLRVSNCNESVAPWALSQSIRERKLVRSLSEYLARSMTELTARINRHIAREE
        +++ Y+ARF++  ++VSN N+ V   A    +R  +   SL++  A SM E+ AR   ++  EE
Subjt:  NMKAYVARFSNERLRVSNCNESVAPWALSQSIRERKLVRSLSEYLARSMTELTARINRHIAREE

TrEMBL top hitse value%identityAlignment
A0A2Z6NDU5 Retrotrans_gag domain-containing protein1.5e-1934.55Show/hide
Query:  MPKGFKGPHLDKYDGSIDPVDHTTLYHDAIRQAGYNDAGQCRGFSRTLIDLARQWFQDLPPHSVESYQDLASKFVDQFHYSYTNRRTKVHLSSIKQKPGE
        +P  F+ P +D YDGS DP  H + +   +  +G +DA  C+ F+ TL D+A +W   LP  SV S++DLA++FV QF  +         L  ++Q+P +
Subjt:  MPKGFKGPHLDKYDGSIDPVDHTTLYHDAIRQAGYNDAGQCRGFSRTLIDLARQWFQDLPPHSVESYQDLASKFVDQFHYSYTNRRTKVHLSSIKQKPGE

Query:  NMKAYVARFSNERLRVSNCNESVAPWALSQSIRERKLVRSLSEYLARSMTELTARINRHIAREEM
         +K Y+ARF++  LRV+  NE +   A  + +       +L+   A SM E+  R  +HI  EE+
Subjt:  NMKAYVARFSNERLRVSNCNESVAPWALSQSIRERKLVRSLSEYLARSMTELTARINRHIAREEM

A0A6J1D3B7 uncharacterized protein LOC1110166193.1e-2032.67Show/hide
Query:  MPKGFKGPHLDKYDGSIDPVDHTTLYHDAIRQAGYNDAGQCRGFSRTLIDLARQWFQDLPPHSVESYQDLASKFVDQFHYSYTNRRTKVHLSSIKQKPGE
        +P  FK P + KYDGS DP+DH  +YH+     G  +A +CR FS TL    R WFQ L   S+ S+++LA  FV QF   +   R   +L +IKQK  E
Subjt:  MPKGFKGPHLDKYDGSIDPVDHTTLYHDAIRQAGYNDAGQCRGFSRTLIDLARQWFQDLPPHSVESYQDLASKFVDQFHYSYTNRRTKVHLSSIKQKPGE

Query:  NMKAYVARFSNERLRVSNCNESVAPWALSQSIRERKLVRSLSEYLARSMTELTARINRHIAREEMLAAQSLDKKPYDKGKLMEKSAMKRESSGSRSDSRT
        ++K YVARF+ E+L+V    ++V        +++ +LV S  +  + + +E  +R     A+  M   + +  K   KGK  + +  ++     R   R 
Subjt:  NMKAYVARFSNERLRVSNCNESVAPWALSQSIRERKLVRSLSEYLARSMTELTARINRHIAREEMLAAQSLDKKPYDKGKLMEKSAMKRESSGSRSDSRT

Query:  DQ
        ++
Subjt:  DQ

A0A6J1DG02 uncharacterized protein LOC1110201059.0e-2030.35Show/hide
Query:  MPKGFKGPHLDKYDGSIDPVDHTTLYHDAIRQAGYNDAGQCRGFSRTLIDLARQWFQDLPPHSVESYQDLASKFVDQFHYSYTNRRTKVHLSSIKQKPGE
        +P  FK P +  YDGS DP D+  ++   I      DA +CR F       AR W++ LP  S+ +Y  L  +F+ QF   + +R+T  HL++I+QK GE
Subjt:  MPKGFKGPHLDKYDGSIDPVDHTTLYHDAIRQAGYNDAGQCRGFSRTLIDLARQWFQDLPPHSVESYQDLASKFVDQFHYSYTNRRTKVHLSSIKQKPGE

Query:  NMKAYVARFSNERLRVSNCNESVAPWALSQSIRERKLVRSLSEYLARSMTELTARINRHIAREEMLAA-------QSLDKKPYDKGKLMEKSAMKRESSG
         ++ YV RF  E+L+V++C++  A       + +  L   L +    +  E+  ++ + I  +E+L         Q   KKP  + +  E  +  R SS 
Subjt:  NMKAYVARFSNERLRVSNCNESVAPWALSQSIRERKLVRSLSEYLARSMTELTARINRHIAREEMLAA-------QSLDKKPYDKGKLMEKSAMKRESSG

Query:  S
        S
Subjt:  S

A0A6J1DM55 uncharacterized protein LOC1110222676.9e-2031.22Show/hide
Query:  FKGPHLDKYDGSIDPVDHTTLYHDAIRQAGYNDAGQCRGFSRTLIDLARQWFQDLPPHSVESYQDLASKFVDQFHYSYTNRRTKVHLSSIKQKPGENMKA
        FK P +  YDGS +P D+  ++   +      DA +CR F       AR W++ LP  S+ +Y  L  +F+ QF   Y +R+T  HL++I+QK GE ++ 
Subjt:  FKGPHLDKYDGSIDPVDHTTLYHDAIRQAGYNDAGQCRGFSRTLIDLARQWFQDLPPHSVESYQDLASKFVDQFHYSYTNRRTKVHLSSIKQKPGENMKA

Query:  YVARFSNERLRVSNCNESVAPWALSQSIRERKLVRSLSEYLARSMTELTARINRHIAREEMLAAQS------LDKKPY--DKGKLMEKSAMKRESSGSRS
        YV RF  E+L+V++C++  A       + ++ L   L E    +  E+  +  + I  +E+L  ++      +D++    DKGK   KS   R+   S S
Subjt:  YVARFSNERLRVSNCNESVAPWALSQSIRERKLVRSLSEYLARSMTELTARINRHIAREEMLAAQS------LDKKPY--DKGKLMEKSAMKRESSGSRS

Query:  DSRTD
         SR D
Subjt:  DSRTD

A0A6J1DY58 uncharacterized protein LOC1110256633.1e-2031.5Show/hide
Query:  MPKGFKGPHLDKYDGSIDPVDHTTLYHDAIRQAGYNDAGQCRGFSRTLIDLARQWFQDLPPHSVESYQDLASKFVDQFHYSYTNRRTKVHLSSIKQKPGE
        +P  FK P +  YDGS DP D+  ++   +      DA +CR F   L D AR W++ LP  S+ +Y  L  +F+ QF   + +R+T  HL++I+QK GE
Subjt:  MPKGFKGPHLDKYDGSIDPVDHTTLYHDAIRQAGYNDAGQCRGFSRTLIDLARQWFQDLPPHSVESYQDLASKFVDQFHYSYTNRRTKVHLSSIKQKPGE

Query:  NMKAYVARFSNERLRVSNCNESVAPWALSQSIRERKLVRSLSEYLARSMTELTARINRHIAREEMLAAQS-LDKKPYDKGKLME---KSAMKRESSGSRS
         ++ YV RF  E+L+V++C++  A       + +  L   L E    +  E+  +  + I  +E+L  ++   +K  D+ KL +   K+  K +  GS S
Subjt:  NMKAYVARFSNERLRVSNCNESVAPWALSQSIRERKLVRSLSEYLARSMTELTARINRHIAREEMLAAQS-LDKKPYDKGKLME---KSAMKRESSGSRS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTAAAGGCTTCAAAGGGCCACACCTGGACAAATACGACGGATCGATAGACCCCGTGGACCACACCACATTGTATCATGATGCGATACGACAGGCTGGGTAC
AATGACGCTGGACAATGTAGAGGCTTCTCTAGGACCCTCATCGATCTTGCTCGACAATGGTTCCAGGACTTGCCCCCGCATTCGGTTGAAAGCTACCAGGATCTA
GCGAGTAAGTTTGTGGACCAGTTCCATTATTCCTATACCAACAGGCGAACGAAAGTCCATTTATCCTCGATCAAACAGAAGCCGGGCGAGAACATGAAAGCATAT
GTCGCACGTTTCTCGAACGAGAGGCTCCGAGTATCCAACTGCAACGAAAGCGTAGCCCCGTGGGCACTCTCTCAGAGTATCAGAGAAAGAAAGCTTGTGCGTTCA
CTCAGCGAGTACCTCGCTAGGTCCATGACTGAGCTCACGGCTAGGATTAACAGGCACATAGCGAGGGAGGAAATGCTGGCGGCCCAATCCTTAGACAAAAAGCCG
TACGACAAAGGGAAATTAATGGAAAAGTCGGCTATGAAAAGAGAGTCCAGTGGGTCCCGGTCGGACTCTAGAACCGACCAACCACAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCTAAAGGCTTCAAAGGGCCACACCTGGACAAATACGACGGATCGATAGACCCCGTGGACCACACCACATTGTATCATGATGCGATACGACAGGCTGGGTAC
AATGACGCTGGACAATGTAGAGGCTTCTCTAGGACCCTCATCGATCTTGCTCGACAATGGTTCCAGGACTTGCCCCCGCATTCGGTTGAAAGCTACCAGGATCTA
GCGAGTAAGTTTGTGGACCAGTTCCATTATTCCTATACCAACAGGCGAACGAAAGTCCATTTATCCTCGATCAAACAGAAGCCGGGCGAGAACATGAAAGCATAT
GTCGCACGTTTCTCGAACGAGAGGCTCCGAGTATCCAACTGCAACGAAAGCGTAGCCCCGTGGGCACTCTCTCAGAGTATCAGAGAAAGAAAGCTTGTGCGTTCA
CTCAGCGAGTACCTCGCTAGGTCCATGACTGAGCTCACGGCTAGGATTAACAGGCACATAGCGAGGGAGGAAATGCTGGCGGCCCAATCCTTAGACAAAAAGCCG
TACGACAAAGGGAAATTAATGGAAAAGTCGGCTATGAAAAGAGAGTCCAGTGGGTCCCGGTCGGACTCTAGAACCGACCAACCACAGTGA
Protein sequenceShow/hide protein sequence
MPKGFKGPHLDKYDGSIDPVDHTTLYHDAIRQAGYNDAGQCRGFSRTLIDLARQWFQDLPPHSVESYQDLASKFVDQFHYSYTNRRTKVHLSSIKQKPGENMKAY
VARFSNERLRVSNCNESVAPWALSQSIRERKLVRSLSEYLARSMTELTARINRHIAREEMLAAQSLDKKPYDKGKLMEKSAMKRESSGSRSDSRTDQPQ