; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc04g25670 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g25670
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr4:18611181..18611645
RNA-Seq ExpressionMoc04g25670
SyntenyMoc04g25670
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022143495.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111013372 [Momordica charantia]1.6e-0747.37Show/hide
Query:  MADLRLSLKANLKVFPEDHSREERPSILNQIPDNKSISLPSGLSAYSSSWSSLSKDTQTLPTVIREAGQALPAVIP
        MADLR SLKA+LKVFPEDHS EERPSIL+Q+PD+KS+           +W+S S+     P ++     +L   +P
Subjt:  MADLRLSLKANLKVFPEDHSREERPSILNQIPDNKSISLPSGLSAYSSSWSSLSKDTQTLPTVIREAGQALPAVIP
TrEMBL top hitse value%identityAlignment
A0A6J1CNY7 Ribonuclease H7.5e-0847.37Show/hide
Query:  MADLRLSLKANLKVFPEDHSREERPSILNQIPDNKSISLPSGLSAYSSSWSSLSKDTQTLPTVIREAGQALPAVIP
        MADLR SLKA+LKVFPEDHS EERPSIL+Q+PD+KS+           +W+S S+     P ++     +L   +P
Subjt:  MADLRLSLKANLKVFPEDHSREERPSILNQIPDNKSISLPSGLSAYSSSWSSLSKDTQTLPTVIREAGQALPAVIP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGACTTGAGGCTTTCCCTAAAGGCCAATCTGAAGGTCTTCCCTGAAGATCATTCAAGGGAGGAACGACCTTCCATACTTAATCAAATTCCAGATAACAAGAGTAT
TTCCTTGCCAAGTGGTCTTTCAGCTTATTCTTCAAGTTGGTCATCTCTTTCCAAGGATACCCAAACTCTTCCCACGGTCATACGTGAAGCAGGTCAAGCTCTTCCCGCGG
TCATACCTGGAGCAGATCGAGCTCTTCCACATGGCCGACGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCGACTTGAGGCTTTCCCTAAAGGCCAATCTGAAGGTCTTCCCTGAAGATCATTCAAGGGAGGAACGACCTTCCATACTTAATCAAATTCCAGATAACAAGAGTAT
TTCCTTGCCAAGTGGTCTTTCAGCTTATTCTTCAAGTTGGTCATCTCTTTCCAAGGATACCCAAACTCTTCCCACGGTCATACGTGAAGCAGGTCAAGCTCTTCCCGCGG
TCATACCTGGAGCAGATCGAGCTCTTCCACATGGCCGACGTTGA
Protein sequenceShow/hide protein sequence
MADLRLSLKANLKVFPEDHSREERPSILNQIPDNKSISLPSGLSAYSSSWSSLSKDTQTLPTVIREAGQALPAVIPGADRALPHGRR