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Moc04g25740 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g25740
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr4:18669792..18675788
RNA-Seq ExpressionMoc04g25740
SyntenyMoc04g25740
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022143565.1 uncharacterized protein LOC111013434 [Momordica charantia]3.4e-1051.32Show/hide
Query:  GSVPVDPKEAKKIDTKVARYILRDGNLYKREFLLPLIKGLTLKDTNYILREVHEGFLHLASAYETSLSNSIPVKIL
        G VP DP+E KK+  K ARY+LRDG LY+R F LPL+K ++ +D  Y+LREVHEG     S    SLS  +P ++L
Subjt:  GSVPVDPKEAKKIDTKVARYILRDGNLYKREFLLPLIKGLTLKDTNYILREVHEGFLHLASAYETSLSNSIPVKIL
XP_022149378.1 uncharacterized protein LOC111017809 [Momordica charantia]6.4e-0960Show/hide
Query:  GSVPVDPKEAKKIDTKVARYILRDGNLYKREFLLPLIKGLTLKDTNYILREVHEG
        G++P DPKE KK+  KVA++ILRDG LY++ F LPL+K +T +D NYI+RE+HEG
Subjt:  GSVPVDPKEAKKIDTKVARYILRDGNLYKREFLLPLIKGLTLKDTNYILREVHEG
XP_022156791.1 uncharacterized protein LOC111023625 [Momordica charantia]1.9e-0859.26Show/hide
Query:  GSVPVDPKEAKKIDTKVARYILRDGNLYKREFLLPLIKGLTLKDTNYILREVHE
        G VP DP+E KK+  K ARY+LRDG LY+R F LPL+K +  +D +Y+LREVHE
Subjt:  GSVPVDPKEAKKIDTKVARYILRDGNLYKREFLLPLIKGLTLKDTNYILREVHE
XP_022157626.1 uncharacterized protein LOC111024288 [Momordica charantia]1.1e-0854.55Show/hide
Query:  GSVPVDPKEAKKIDTKVARYILRDGNLYKREFLLPLIKGLTLKDTNYILREVHEG
        G++P++PKEAKK+  K ARY+LRD  +Y+R F LPL+K ++ +D +Y+L+EVHEG
Subjt:  GSVPVDPKEAKKIDTKVARYILRDGNLYKREFLLPLIKGLTLKDTNYILREVHEG
XP_022158591.1 uncharacterized protein LOC111025048 [Momordica charantia]1.4e-0861.82Show/hide
Query:  GSVPVDPKEAKKIDTKVARYILRDGNLYKREFLLPLIKGLTLKDTNYILREVHEG
        G+ P D K  KK+  KVAR+ILRDG LY+R F LPL+K +TL+D NYI+RE+HEG
Subjt:  GSVPVDPKEAKKIDTKVARYILRDGNLYKREFLLPLIKGLTLKDTNYILREVHEG
TrEMBL top hitse value%identityAlignment
A0A6J1CP53 Ribonuclease H1.6e-1051.32Show/hide
Query:  GSVPVDPKEAKKIDTKVARYILRDGNLYKREFLLPLIKGLTLKDTNYILREVHEGFLHLASAYETSLSNSIPVKIL
        G VP DP+E KK+  K ARY+LRDG LY+R F LPL+K ++ +D  Y+LREVHEG     S    SLS  +P ++L
Subjt:  GSVPVDPKEAKKIDTKVARYILRDGNLYKREFLLPLIKGLTLKDTNYILREVHEGFLHLASAYETSLSNSIPVKIL
A0A6J1D6M1 Ribonuclease H3.1e-0960Show/hide
Query:  GSVPVDPKEAKKIDTKVARYILRDGNLYKREFLLPLIKGLTLKDTNYILREVHEG
        G++P DPKE KK+  KVA++ILRDG LY++ F LPL+K +T +D NYI+RE+HEG
Subjt:  GSVPVDPKEAKKIDTKVARYILRDGNLYKREFLLPLIKGLTLKDTNYILREVHEG
A0A6J1DW17 Ribonuclease H9.0e-0959.26Show/hide
Query:  GSVPVDPKEAKKIDTKVARYILRDGNLYKREFLLPLIKGLTLKDTNYILREVHE
        G VP DP+E KK+  K ARY+LRDG LY+R F LPL+K +  +D +Y+LREVHE
Subjt:  GSVPVDPKEAKKIDTKVARYILRDGNLYKREFLLPLIKGLTLKDTNYILREVHE
A0A6J1DYR5 uncharacterized protein LOC1110242885.3e-0954.55Show/hide
Query:  GSVPVDPKEAKKIDTKVARYILRDGNLYKREFLLPLIKGLTLKDTNYILREVHEG
        G++P++PKEAKK+  K ARY+LRD  +Y+R F LPL+K ++ +D +Y+L+EVHEG
Subjt:  GSVPVDPKEAKKIDTKVARYILRDGNLYKREFLLPLIKGLTLKDTNYILREVHEG
A0A6J1E1C7 uncharacterized protein LOC1110250486.9e-0961.82Show/hide
Query:  GSVPVDPKEAKKIDTKVARYILRDGNLYKREFLLPLIKGLTLKDTNYILREVHEG
        G+ P D K  KK+  KVAR+ILRDG LY+R F LPL+K +TL+D NYI+RE+HEG
Subjt:  GSVPVDPKEAKKIDTKVARYILRDGNLYKREFLLPLIKGLTLKDTNYILREVHEG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGGACTCAAATCGAGGCTGACGTTACGAGCTATACACTCTTACCACCATCCCAATCTCCGAAATTCTCACCAATATGAGGAGACTGGGATGAGAAGCTTCTCAAA
CGCCCTAGGAAGCTTAAAGGAGATCCAGAAAAATGAGATAAAGGGAAGTATTACCGATTTTATAAAGACCACGGCCATGATACCTCAAGCTATTTCGAGCTCAAATGCCA
GATTGAAGAGCTCATTCAAAATGGCCACTTCAAGAACTTCGTTGGTAAGCCTAAATCGAACTTTTCAGAAAAGAAGGATGAAAGGCGATGTTCAAGGACGCTGCGACTTG
CCATCTTTAGAGGCCCAAGTGGGAGTCAGAAAGGTGCTCATTGAAGGAGGAGCATCCGCCAACATTTTGTCCTTGACTACTTACACTACCTTGGGATGGACTAGGGCACA
GTTGAAGAAGAGTCTGACCCTCCTGGTCAGATCCTTGCGGAGACAATCATACCAGAAGGCTGCATTGATCTCCGAGTTGCAATTGGTTACCCTAGCCTCTGCAGCAACCA
AAAGTGGTAGTGAAAGAGTAGAACTCAAATCCCAAGAAAAGCCAGAAATTGCGCCTAGTGCATTTTCCCAACATAGTGTGTTTTCCATGTTTTGCATCAAAACCAAGTTT
AGGACAACACACCCAACACTTACACCCCCAGTGACCTCGGACTCGGAGGGCGACCTTGAGTGGACCTTGTACATTGATGGTTCATCTAGCGACAGAGGATGTGAAGCAGG
TAGCGTTCCTGTAGATCCTAAAGAAGCTAAGAAGATCGACACTAAAGTAGCTCGGTACATACTCCGAGATGGAAACTTGTACAAGCGCGAATTTTTGCTACCTCTCATAA
AAGGCTTGACCCTTAAAGACACAAACTACATCCTTAGAGAAGTACACGAGGGCTTTCTGCATTTAGCTTCTGCATACGAGACCAGCTTGTCCAATTCAATTCCAGTTAAA
ATACTTGATGCACCTTCAATTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTTGGACTCAAATCGAGGCTGACGTTACGAGCTATACACTCTTACCACCATCCCAATCTCCGAAATTCTCACCAATATGAGGAGACTGGGATGAGAAGCTTCTCAAA
CGCCCTAGGAAGCTTAAAGGAGATCCAGAAAAATGAGATAAAGGGAAGTATTACCGATTTTATAAAGACCACGGCCATGATACCTCAAGCTATTTCGAGCTCAAATGCCA
GATTGAAGAGCTCATTCAAAATGGCCACTTCAAGAACTTCGTTGGTAAGCCTAAATCGAACTTTTCAGAAAAGAAGGATGAAAGGCGATGTTCAAGGACGCTGCGACTTG
CCATCTTTAGAGGCCCAAGTGGGAGTCAGAAAGGTGCTCATTGAAGGAGGAGCATCCGCCAACATTTTGTCCTTGACTACTTACACTACCTTGGGATGGACTAGGGCACA
GTTGAAGAAGAGTCTGACCCTCCTGGTCAGATCCTTGCGGAGACAATCATACCAGAAGGCTGCATTGATCTCCGAGTTGCAATTGGTTACCCTAGCCTCTGCAGCAACCA
AAAGTGGTAGTGAAAGAGTAGAACTCAAATCCCAAGAAAAGCCAGAAATTGCGCCTAGTGCATTTTCCCAACATAGTGTGTTTTCCATGTTTTGCATCAAAACCAAGTTT
AGGACAACACACCCAACACTTACACCCCCAGTGACCTCGGACTCGGAGGGCGACCTTGAGTGGACCTTGTACATTGATGGTTCATCTAGCGACAGAGGATGTGAAGCAGG
TAGCGTTCCTGTAGATCCTAAAGAAGCTAAGAAGATCGACACTAAAGTAGCTCGGTACATACTCCGAGATGGAAACTTGTACAAGCGCGAATTTTTGCTACCTCTCATAA
AAGGCTTGACCCTTAAAGACACAAACTACATCCTTAGAGAAGTACACGAGGGCTTTCTGCATTTAGCTTCTGCATACGAGACCAGCTTGTCCAATTCAATTCCAGTTAAA
ATACTTGATGCACCTTCAATTTAG
Protein sequenceShow/hide protein sequence
MFGLKSRLTLRAIHSYHHPNLRNSHQYEETGMRSFSNALGSLKEIQKNEIKGSITDFIKTTAMIPQAISSSNARLKSSFKMATSRTSLVSLNRTFQKRRMKGDVQGRCDL
PSLEAQVGVRKVLIEGGASANILSLTTYTTLGWTRAQLKKSLTLLVRSLRRQSYQKAALISELQLVTLASAATKSGSERVELKSQEKPEIAPSAFSQHSVFSMFCIKTKF
RTTHPTLTPPVTSDSEGDLEWTLYIDGSSSDRGCEAGSVPVDPKEAKKIDTKVARYILRDGNLYKREFLLPLIKGLTLKDTNYILREVHEGFLHLASAYETSLSNSIPVK
ILDAPSI