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Moc04g25850 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g25850
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionDUF4219 domain-containing protein/UBN2 domain-containing protein
Genome locationchr4:18765144..18765694
RNA-Seq ExpressionMoc04g25850
SyntenyMoc04g25850
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042872.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]1.5e-2271.91Show/hide
Query:  VVLDENYGIESAKEIWEFLKSEYEGDERTKDMKVLNLMKESERMQMKDSKSIKEYSDKLIEIGNKARTLGSNLSDKRLVQKILVAVRLR
        V+ ++   +ESAKEIWEFLKSEYEG ER K MKVLNLM+E ERMQ+KDSKSI EYSDKLI I NK R LG +LSD RLVQKILV+V  R
Subjt:  VVLDENYGIESAKEIWEFLKSEYEGDERTKDMKVLNLMKESERMQMKDSKSIKEYSDKLIEIGNKARTLGSNLSDKRLVQKILVAVRLR

XP_008450210.1 PREDICTED: uncharacterized protein LOC103491872 [Cucumis melo]1.9e-2271.91Show/hide
Query:  VVLDENYGIESAKEIWEFLKSEYEGDERTKDMKVLNLMKESERMQMKDSKSIKEYSDKLIEIGNKARTLGSNLSDKRLVQKILVAVRLR
        V+ +    +ESAKEIWEFLKSEYEG ER K MKVLNLM+E ERMQ+KDSKSI EYSDKLI I NK R LG +LSD RLVQKILV+V  R
Subjt:  VVLDENYGIESAKEIWEFLKSEYEGDERTKDMKVLNLMKESERMQMKDSKSIKEYSDKLIEIGNKARTLGSNLSDKRLVQKILVAVRLR

XP_022151329.1 uncharacterized protein LOC111019291 [Momordica charantia]2.3e-2380.77Show/hide
Query:  IESAKEIWEFLKSEYEGDERTKDMKVLNLMKESERMQMKDSKSIKEYSDKLIEIGNKARTLGSNLSDKRLVQKILVAV
        ++SAKEIWEFLKSEYEGDERTK M VLNL++E ERMQMKDS+SIKEYSDKLI I NKAR LG++LSD RLVQKILV+V
Subjt:  IESAKEIWEFLKSEYEGDERTKDMKVLNLMKESERMQMKDSKSIKEYSDKLIEIGNKARTLGSNLSDKRLVQKILVAV

XP_022152365.1 uncharacterized protein LOC111020109 [Momordica charantia]3.3e-2276.54Show/hide
Query:  IESAKEIWEFLKSEYEGDERTKDMKVLNLMKESERMQMKDSKSIKEYSDKLIEIGNKARTLGSNLSDKRLVQKILVAVRLR
        ++SAKEIWEFLKSEYEGDER K MKVLNL++E ERMQMKDS SIKEYSDKLI I NKAR LG+++SD RLV KILV+V  R
Subjt:  IESAKEIWEFLKSEYEGDERTKDMKVLNLMKESERMQMKDSKSIKEYSDKLIEIGNKARTLGSNLSDKRLVQKILVAVRLR

XP_022157304.1 uncharacterized protein LOC111024037 [Momordica charantia]3.5e-2482.05Show/hide
Query:  IESAKEIWEFLKSEYEGDERTKDMKVLNLMKESERMQMKDSKSIKEYSDKLIEIGNKARTLGSNLSDKRLVQKILVAV
        ++SAKEIWEFLKSEYEGDER K MKVLNL++E ERMQMKDS+SIKEYSDKLIEI NKAR LG++LSD RLVQKILV+V
Subjt:  IESAKEIWEFLKSEYEGDERTKDMKVLNLMKESERMQMKDSKSIKEYSDKLIEIGNKARTLGSNLSDKRLVQKILVAV

TrEMBL top hitse value%identityAlignment
A0A1S3BNQ3 uncharacterized protein LOC1034918729.4e-2371.91Show/hide
Query:  VVLDENYGIESAKEIWEFLKSEYEGDERTKDMKVLNLMKESERMQMKDSKSIKEYSDKLIEIGNKARTLGSNLSDKRLVQKILVAVRLR
        V+ +    +ESAKEIWEFLKSEYEG ER K MKVLNLM+E ERMQ+KDSKSI EYSDKLI I NK R LG +LSD RLVQKILV+V  R
Subjt:  VVLDENYGIESAKEIWEFLKSEYEGDERTKDMKVLNLMKESERMQMKDSKSIKEYSDKLIEIGNKARTLGSNLSDKRLVQKILVAVRLR

A0A5D3C1N2 Retrovirus-related Pol polyprotein from transposon TNT 1-947.2e-2371.91Show/hide
Query:  VVLDENYGIESAKEIWEFLKSEYEGDERTKDMKVLNLMKESERMQMKDSKSIKEYSDKLIEIGNKARTLGSNLSDKRLVQKILVAVRLR
        V+ ++   +ESAKEIWEFLKSEYEG ER K MKVLNLM+E ERMQ+KDSKSI EYSDKLI I NK R LG +LSD RLVQKILV+V  R
Subjt:  VVLDENYGIESAKEIWEFLKSEYEGDERTKDMKVLNLMKESERMQMKDSKSIKEYSDKLIEIGNKARTLGSNLSDKRLVQKILVAVRLR

A0A6J1DCR7 uncharacterized protein LOC1110192911.1e-2380.77Show/hide
Query:  IESAKEIWEFLKSEYEGDERTKDMKVLNLMKESERMQMKDSKSIKEYSDKLIEIGNKARTLGSNLSDKRLVQKILVAV
        ++SAKEIWEFLKSEYEGDERTK M VLNL++E ERMQMKDS+SIKEYSDKLI I NKAR LG++LSD RLVQKILV+V
Subjt:  IESAKEIWEFLKSEYEGDERTKDMKVLNLMKESERMQMKDSKSIKEYSDKLIEIGNKARTLGSNLSDKRLVQKILVAV

A0A6J1DDR0 uncharacterized protein LOC1110201091.6e-2276.54Show/hide
Query:  IESAKEIWEFLKSEYEGDERTKDMKVLNLMKESERMQMKDSKSIKEYSDKLIEIGNKARTLGSNLSDKRLVQKILVAVRLR
        ++SAKEIWEFLKSEYEGDER K MKVLNL++E ERMQMKDS SIKEYSDKLI I NKAR LG+++SD RLV KILV+V  R
Subjt:  IESAKEIWEFLKSEYEGDERTKDMKVLNLMKESERMQMKDSKSIKEYSDKLIEIGNKARTLGSNLSDKRLVQKILVAVRLR

A0A6J1DW41 uncharacterized protein LOC1110240371.7e-2482.05Show/hide
Query:  IESAKEIWEFLKSEYEGDERTKDMKVLNLMKESERMQMKDSKSIKEYSDKLIEIGNKARTLGSNLSDKRLVQKILVAV
        ++SAKEIWEFLKSEYEGDER K MKVLNL++E ERMQMKDS+SIKEYSDKLIEI NKAR LG++LSD RLVQKILV+V
Subjt:  IESAKEIWEFLKSEYEGDERTKDMKVLNLMKESERMQMKDSKSIKEYSDKLIEIGNKARTLGSNLSDKRLVQKILVAV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGTTGTGTTAGATGAAAATTATGGAATTGAGTCAGCAAAGGAGATTTGGGAGTTCCTCAAAAGTGAGTATGAAGGTGATGAGAGGACTAAAGACATGAAG
GTATTGAACTTGATGAAGGAATCCGAGAGAATGCAGATGAAAGATTCTAAGTCCATTAAAGAGTACTCAGACAAGTTGATTGAGATTGGTAACAAGGCAAGAACA
TTAGGAAGCAATTTATCTGACAAAAGATTGGTTCAAAAGATTCTGGTTGCAGTACGCCTAAGAGATGCAAAGCAACTATTGCTTCCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGAGTTGTGTTAGATGAAAATTATGGAATTGAGTCAGCAAAGGAGATTTGGGAGTTCCTCAAAAGTGAGTATGAAGGTGATGAGAGGACTAAAGACATGAAG
GTATTGAACTTGATGAAGGAATCCGAGAGAATGCAGATGAAAGATTCTAAGTCCATTAAAGAGTACTCAGACAAGTTGATTGAGATTGGTAACAAGGCAAGAACA
TTAGGAAGCAATTTATCTGACAAAAGATTGGTTCAAAAGATTCTGGTTGCAGTACGCCTAAGAGATGCAAAGCAACTATTGCTTCCTTAG
Protein sequenceShow/hide protein sequence
MRVVLDENYGIESAKEIWEFLKSEYEGDERTKDMKVLNLMKESERMQMKDSKSIKEYSDKLIEIGNKARTLGSNLSDKRLVQKILVAVRLRDAKQLLLP