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Moc04g25890 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g25890
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionIntegrase catalytic domain-containing protein
Genome locationchr4:18837782..18844546
RNA-Seq ExpressionMoc04g25890
SyntenyMoc04g25890
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8645659.1 hypothetical protein Csa_020439 [Cucumis sativus]1.4e-0445Show/hide
Query:  MVASQNQVAMNSCGSTWLADSGCNSHVTGDMGHFSSTTDYVGDNQIAVGSGQSLLITYTG
        MVASQN   ++   S+ L DSGCN+H+T DM + S   +Y G+ Q+ VG+GQ+  I+++G
Subjt:  MVASQNQVAMNSCGSTWLADSGCNSHVTGDMGHFSSTTDYVGDNQIAVGSGQSLLITYTG

KAG5570128.1 hypothetical protein H5410_059894 [Solanum commersonii]6.8e-0452.17Show/hide
Query:  STWLADSGCNSHVTGDMGHFSSTTDYVGDNQIAVGSGQSLLITYTG
        ++W ADSG  +HVT D+ H S  TDY G++Q+AVG+GQ L I + G
Subjt:  STWLADSGCNSHVTGDMGHFSSTTDYVGDNQIAVGSGQSLLITYTG

XP_008448008.1 PREDICTED: uncharacterized protein LOC103490319 isoform X3 [Cucumis melo]8.0e-0541.27Show/hide
Query:  MVASQNQVAMNSCGSTWLADSGCNSHVTGDMGHFSSTTDYVGDNQIAVGSGQSLLITYTGQIF
        MVASQN   ++   S+ L DSGCN+ +T DM + S   +Y G+ Q+ +G+GQ+  ++++GQ+F
Subjt:  MVASQNQVAMNSCGSTWLADSGCNSHVTGDMGHFSSTTDYVGDNQIAVGSGQSLLITYTGQIF

XP_011658579.1 uncharacterized protein LOC105436058 [Cucumis sativus]3.3e-0646.03Show/hide
Query:  MVASQNQVAMNSCGSTWLADSGCNSHVTGDMGHFSSTTDYVGDNQIAVGSGQSLLITYTGQIF
        MVASQN   ++   S+ L DSGCN+H+T DM + S   +Y G+ Q+ VG+GQ+  I+++GQ+F
Subjt:  MVASQNQVAMNSCGSTWLADSGCNSHVTGDMGHFSSTTDYVGDNQIAVGSGQSLLITYTGQIF

XP_022156563.1 uncharacterized protein LOC111023438 [Momordica charantia]1.1e-0650.85Show/hide
Query:  MVASQNQVAMNSCGSTWLADSGCNSHVTGDMGHFSSTTDYVGDNQIAVGSGQSLLITYT
        MVA+ N   + S   +WL DSGCN+HVT D+   S+ ++Y GD QI VG+GQSL I +T
Subjt:  MVASQNQVAMNSCGSTWLADSGCNSHVTGDMGHFSSTTDYVGDNQIAVGSGQSLLITYT

TrEMBL top hitse value%identityAlignment
A0A1S3BIR3 uncharacterized protein LOC103490319 isoform X33.9e-0541.27Show/hide
Query:  MVASQNQVAMNSCGSTWLADSGCNSHVTGDMGHFSSTTDYVGDNQIAVGSGQSLLITYTGQIF
        MVASQN   ++   S+ L DSGCN+ +T DM + S   +Y G+ Q+ +G+GQ+  ++++GQ+F
Subjt:  MVASQNQVAMNSCGSTWLADSGCNSHVTGDMGHFSSTTDYVGDNQIAVGSGQSLLITYTGQIF

A0A5J4ZP84 Uncharacterized protein3.3e-0448.08Show/hide
Query:  TWLADSGCNSHVTGDMGHFSSTTDYVGDNQIAVGSGQSLLITYTGQIFSPDN
        TWLADSG N+H+T D+ +   +  Y G+N++AVG+G SL I++TG    P N
Subjt:  TWLADSGCNSHVTGDMGHFSSTTDYVGDNQIAVGSGQSLLITYTGQIFSPDN

A0A5K0ZVE6 gag_pre-integrs domain-containing protein (Fragment)1.9e-0455.56Show/hide
Query:  WLADSGCNSHVTGDMGHFSSTTDYVGDNQIAVGSGQSLLITYTGQ
        WLADSG +SH+TGD G  S+ + Y G N++ +G+G+SL IT+TGQ
Subjt:  WLADSGCNSHVTGDMGHFSSTTDYVGDNQIAVGSGQSLLITYTGQ

A0A6J1D9L6 uncharacterized protein LOC1110188924.3e-0447.89Show/hide
Query:  MVASQNQVAM---NSCGSTWLADSGCNSHVTGDMGHF---SSTTDYVGDNQIAVGSGQSLLITY--TGQIF
        MVA QN   +   NS  +TWLADS CN+H+T D+ +    S  +DY G+  I+VGSGQS  IT+   GQ+F
Subjt:  MVASQNQVAM---NSCGSTWLADSGCNSHVTGDMGHF---SSTTDYVGDNQIAVGSGQSLLITY--TGQIF

A0A6J1DQZ0 uncharacterized protein LOC1110234385.4e-0750.85Show/hide
Query:  MVASQNQVAMNSCGSTWLADSGCNSHVTGDMGHFSSTTDYVGDNQIAVGSGQSLLITYT
        MVA+ N   + S   +WL DSGCN+HVT D+   S+ ++Y GD QI VG+GQSL I +T
Subjt:  MVASQNQVAMNSCGSTWLADSGCNSHVTGDMGHFSSTTDYVGDNQIAVGSGQSLLITYT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGCCTCACAAAATCAAGTTGCTATGAACTCCTGTGGTTCCACTTGGCTTGCTGATTCAGGATGTAACTCTCATGTTACTGGAGATATGGGTCATTTTTCCTCTAC
TACTGACTATGTTGGTGATAATCAGATTGCTGTTGGGAGTGGTCAATCACTTCTGATAACCTATACAGGACAAATCTTCAGCCCAGATAATCTTTCGAGCTTTGTTGGTG
CTGCAGCATCAGAGTCAAAAAGGCAGCAAAAACACAGAAATGTTACTCCTACATTACCTTCATCAACTTCCTCATCACTGGTAGCTGCCCCTGATTTGGTTTCTGCAGAT
TCAAATGTTGCAGCCCTTATTACTGTAGAGTCTACAAATGGTGATTCTCATATTGCAGCCTCTAATAATCCTATTGCCTCTGATGTTGTAGCATCTGGTAACTACCGATC
AGCTTCTTCTTGGCTGTACAACTCTATGACTCTAGAAGTTGCAACACAAGTGACGGGGTACGAAATGCTTGTGATTTATGGGCTGCCATATAAGAACTCTTTGAAGTACA
ATCTCAGGCAGAAGAAGAGTATCTTTGTCAGGAACAATACACAAAATCGTAGTAAAAATTTCAACGACAACTCTATTCAAGGGGTTGACAACAACAATATTGGACAAGAT
AGTGGTGCTTTGAAGCACGTCACCGCAGACTACAACAGTGTGGTTCAACCTACTGAATATGGAGATATGGGAAGAGTTACAATAGCTGAAAATCTAGTTAGTGTGTCCAA
ACTCACTAAAGACAACAACGTATACCTTGAATTTCATGATGATTCTTGTAAGCAAGGTGGTGCTCAAAGGGGATCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTTGCCTCACAAAATCAAGTTGCTATGAACTCCTGTGGTTCCACTTGGCTTGCTGATTCAGGATGTAACTCTCATGTTACTGGAGATATGGGTCATTTTTCCTCTAC
TACTGACTATGTTGGTGATAATCAGATTGCTGTTGGGAGTGGTCAATCACTTCTGATAACCTATACAGGACAAATCTTCAGCCCAGATAATCTTTCGAGCTTTGTTGGTG
CTGCAGCATCAGAGTCAAAAAGGCAGCAAAAACACAGAAATGTTACTCCTACATTACCTTCATCAACTTCCTCATCACTGGTAGCTGCCCCTGATTTGGTTTCTGCAGAT
TCAAATGTTGCAGCCCTTATTACTGTAGAGTCTACAAATGGTGATTCTCATATTGCAGCCTCTAATAATCCTATTGCCTCTGATGTTGTAGCATCTGGTAACTACCGATC
AGCTTCTTCTTGGCTGTACAACTCTATGACTCTAGAAGTTGCAACACAAGTGACGGGGTACGAAATGCTTGTGATTTATGGGCTGCCATATAAGAACTCTTTGAAGTACA
ATCTCAGGCAGAAGAAGAGTATCTTTGTCAGGAACAATACACAAAATCGTAGTAAAAATTTCAACGACAACTCTATTCAAGGGGTTGACAACAACAATATTGGACAAGAT
AGTGGTGCTTTGAAGCACGTCACCGCAGACTACAACAGTGTGGTTCAACCTACTGAATATGGAGATATGGGAAGAGTTACAATAGCTGAAAATCTAGTTAGTGTGTCCAA
ACTCACTAAAGACAACAACGTATACCTTGAATTTCATGATGATTCTTGTAAGCAAGGTGGTGCTCAAAGGGGATCTTAG
Protein sequenceShow/hide protein sequence
MVASQNQVAMNSCGSTWLADSGCNSHVTGDMGHFSSTTDYVGDNQIAVGSGQSLLITYTGQIFSPDNLSSFVGAAASESKRQQKHRNVTPTLPSSTSSSLVAAPDLVSAD
SNVAALITVESTNGDSHIAASNNPIASDVVASGNYRSASSWLYNSMTLEVATQVTGYEMLVIYGLPYKNSLKYNLRQKKSIFVRNNTQNRSKNFNDNSIQGVDNNNIGQD
SGALKHVTADYNSVVQPTEYGDMGRVTIAENLVSVSKLTKDNNVYLEFHDDSCKQGGAQRGS