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Moc04g26080 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g26080
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr4:18975482..18978099
RNA-Seq ExpressionMoc04g26080
SyntenyMoc04g26080
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0030430 - host cell cytoplasm (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022135947.1 uncharacterized protein LOC111007781 [Momordica charantia]2.1e-2898.48Show/hide
Query:  QPDVMEIDIPSPSWIDPIVEFIKGNLPQDLKEQKKMERKAARFILRDGALYRRSFSLPLLKCVTPE
        +PDVMEIDIPSPSWIDPIVEFIKGNLPQDLKEQKKMERKAARFILRDGALYRRSFSLPLLKCVTPE
Subjt:  QPDVMEIDIPSPSWIDPIVEFIKGNLPQDLKEQKKMERKAARFILRDGALYRRSFSLPLLKCVTPE

XP_022149417.1 protein NYNRIN-like [Momordica charantia]2.0e-2383.33Show/hide
Query:  QPDVMEIDIPSPSWIDPIVEFIKGNLPQDLKEQKKMERKAARFILRDGALYRRSFSLPLLKCVTPE
        +PDVME+D PSPSW+DPIVEFIKGN PQD KEQKKM R+AARF LR+GALYRR FSLPLLKCVTPE
Subjt:  QPDVMEIDIPSPSWIDPIVEFIKGNLPQDLKEQKKMERKAARFILRDGALYRRSFSLPLLKCVTPE

XP_022151715.1 uncharacterized protein LOC111019628 [Momordica charantia]8.2e-2589.23Show/hide
Query:  PDVMEIDIPSPSWIDPIVEFIKGNLPQDLKEQKKMERKAARFILRDGALYRRSFSLPLLKCVTPE
        PDVMEIDIPSPSW+DPIVEFI+GN PQ+LKEQKKM RKAARF+LRDGALYRR FSLPLLKCVTPE
Subjt:  PDVMEIDIPSPSWIDPIVEFIKGNLPQDLKEQKKMERKAARFILRDGALYRRSFSLPLLKCVTPE

XP_022158092.1 uncharacterized protein LOC111024661 [Momordica charantia]3.4e-2383.33Show/hide
Query:  QPDVMEIDIPSPSWIDPIVEFIKGNLPQDLKEQKKMERKAARFILRDGALYRRSFSLPLLKCVTPE
        +PDVMEID PSPSW+DPI+EFIKGN PQD KEQK+M R+AARFILRDG LYRR FSLPLLKCVTPE
Subjt:  QPDVMEIDIPSPSWIDPIVEFIKGNLPQDLKEQKKMERKAARFILRDGALYRRSFSLPLLKCVTPE

XP_022158589.1 uncharacterized protein LOC111025045 [Momordica charantia]3.1e-2486.36Show/hide
Query:  QPDVMEIDIPSPSWIDPIVEFIKGNLPQDLKEQKKMERKAARFILRDGALYRRSFSLPLLKCVTPE
        +PDVME+D P+PSW+DPIVEFIKGNLPQD KEQKKM RKAARFILRD ALYRR FSLPLLKCVTPE
Subjt:  QPDVMEIDIPSPSWIDPIVEFIKGNLPQDLKEQKKMERKAARFILRDGALYRRSFSLPLLKCVTPE

TrEMBL top hitse value%identityAlignment
A0A6J1C472 uncharacterized protein LOC1110077811.0e-2898.48Show/hide
Query:  QPDVMEIDIPSPSWIDPIVEFIKGNLPQDLKEQKKMERKAARFILRDGALYRRSFSLPLLKCVTPE
        +PDVMEIDIPSPSWIDPIVEFIKGNLPQDLKEQKKMERKAARFILRDGALYRRSFSLPLLKCVTPE
Subjt:  QPDVMEIDIPSPSWIDPIVEFIKGNLPQDLKEQKKMERKAARFILRDGALYRRSFSLPLLKCVTPE

A0A6J1D7W6 Ribonuclease H9.7e-2483.33Show/hide
Query:  QPDVMEIDIPSPSWIDPIVEFIKGNLPQDLKEQKKMERKAARFILRDGALYRRSFSLPLLKCVTPE
        +PDVME+D PSPSW+DPIVEFIKGN PQD KEQKKM R+AARF LR+GALYRR FSLPLLKCVTPE
Subjt:  QPDVMEIDIPSPSWIDPIVEFIKGNLPQDLKEQKKMERKAARFILRDGALYRRSFSLPLLKCVTPE

A0A6J1DBZ0 uncharacterized protein LOC1110196284.0e-2589.23Show/hide
Query:  PDVMEIDIPSPSWIDPIVEFIKGNLPQDLKEQKKMERKAARFILRDGALYRRSFSLPLLKCVTPE
        PDVMEIDIPSPSW+DPIVEFI+GN PQ+LKEQKKM RKAARF+LRDGALYRR FSLPLLKCVTPE
Subjt:  PDVMEIDIPSPSWIDPIVEFIKGNLPQDLKEQKKMERKAARFILRDGALYRRSFSLPLLKCVTPE

A0A6J1DG06 uncharacterized protein LOC1110204781.7e-2386.15Show/hide
Query:  PDVMEIDIPSPSWIDPIVEFIKGNLPQDLKEQKKMERKAARFILRDGALYRRSFSLPLLKCVTPE
        PDVMEID PSPSW+DPIVEFIKGN PQ+LKEQK+M RKAARF+LRDGALYRR FSLPLLKCVT E
Subjt:  PDVMEIDIPSPSWIDPIVEFIKGNLPQDLKEQKKMERKAARFILRDGALYRRSFSLPLLKCVTPE

A0A6J1DZV0 uncharacterized protein LOC1110250451.5e-2486.36Show/hide
Query:  QPDVMEIDIPSPSWIDPIVEFIKGNLPQDLKEQKKMERKAARFILRDGALYRRSFSLPLLKCVTPE
        +PDVME+D P+PSW+DPIVEFIKGNLPQD KEQKKM RKAARFILRD ALYRR FSLPLLKCVTPE
Subjt:  QPDVMEIDIPSPSWIDPIVEFIKGNLPQDLKEQKKMERKAARFILRDGALYRRSFSLPLLKCVTPE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCTGGATGGACCAGTTCTCAGTTGAAGAAGAGTCCAACACCCTTGGTTGGATTCTCTGGAGAATCGGTCTCTCCAGAAGGGTGTATCGACTTACCGGTTACGATTG
GTGGGCACGGTCCGTGGAGAGCAGAGAACTTCGAAGGAGTGCTATGCCTCCGCGCTCAAAGGGTCATCAGTATGCGCCCTGGATGAACAAGCTAGCTAGGACGAGTTGCC
GAAGCCCGAGGCCGACCTACCAAAACCAGCCAGATGTGATGGAGATTGACATCCCATCACCCTCGTGGATAGATCCAATCGTGGAGTTCATCAAAGGAAATCTGCCGCAA
GATCTGAAGGAGCAAAAGAAGATGGAGCGAAAAGCAGCCCGGTTCATACTCCGAGATGGAGCATTGTACCGACGTAGCTTCTCCCTACCTCTGCTTAAGTGTGTAACTCC
TGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGTCCTGGATGGACCAGTTCTCAGTTGAAGAAGAGTCCAACACCCTTGGTTGGATTCTCTGGAGAATCGGTCTCTCCAGAAGGGTGTATCGACTTACCGGTTACGATTG
GTGGGCACGGTCCGTGGAGAGCAGAGAACTTCGAAGGAGTGCTATGCCTCCGCGCTCAAAGGGTCATCAGTATGCGCCCTGGATGAACAAGCTAGCTAGGACGAGTTGCC
GAAGCCCGAGGCCGACCTACCAAAACCAGCCAGATGTGATGGAGATTGACATCCCATCACCCTCGTGGATAGATCCAATCGTGGAGTTCATCAAAGGAAATCTGCCGCAA
GATCTGAAGGAGCAAAAGAAGATGGAGCGAAAAGCAGCCCGGTTCATACTCCGAGATGGAGCATTGTACCGACGTAGCTTCTCCCTACCTCTGCTTAAGTGTGTAACTCC
TGAATAA
Protein sequenceShow/hide protein sequence
MSWMDQFSVEEESNTLGWILWRIGLSRRVYRLTGYDWWARSVESRELRRSAMPPRSKGHQYAPWMNKLARTSCRSPRPTYQNQPDVMEIDIPSPSWIDPIVEFIKGNLPQ
DLKEQKKMERKAARFILRDGALYRRSFSLPLLKCVTPE