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Moc04g26370 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g26370
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrovirus-related Pol polyprotein from transposon opus
Genome locationchr4:19235523..19236835
RNA-Seq ExpressionMoc04g26370
SyntenyMoc04g26370
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022158490.1 uncharacterized protein LOC111024970 [Momordica charantia]6.5e-1152.5Show/hide
Query:  MSSQQQEVKPTTSASNSMENLMRDYMVKNDATLQSQTASLRNLEVQLGQMANELKNRPIDDLLIKEIQKETLLDHLEKEL
        M +QQQ  +P  ++SNSME +MR+YM +NDA +QSQ A  RNLEVQLGQMAN+LKNRP        +Q + +  H E +L
Subjt:  MSSQQQEVKPTTSASNSMENLMRDYMVKNDATLQSQTASLRNLEVQLGQMANELKNRPIDDLLIKEIQKETLLDHLEKEL

XP_030503898.1 uncharacterized protein LOC115719117 [Cannabis sativa]4.2e-1070.37Show/hide
Query:  QQEVKPTTSASNSMENLMRDYMVKNDATLQSQTASLRNLEVQLGQMANELKNRP
        QQ  +P  S ++S+E+LMRDYM KNDA +QSQ ASLRNLEVQLGQ+AN+LKNRP
Subjt:  QQEVKPTTSASNSMENLMRDYMVKNDATLQSQTASLRNLEVQLGQMANELKNRP

XP_030509134.1 uncharacterized protein LOC115723804 [Cannabis sativa]2.5e-1070.37Show/hide
Query:  QQEVKPTTSASNSMENLMRDYMVKNDATLQSQTASLRNLEVQLGQMANELKNRP
        QQ  +P  S ++S+E+LMRDYM KNDA +QSQ ASLRNLEVQLGQ+AN+LKNRP
Subjt:  QQEVKPTTSASNSMENLMRDYMVKNDATLQSQTASLRNLEVQLGQMANELKNRP

XP_030509259.1 uncharacterized protein LOC115723937 [Cannabis sativa]4.2e-1070.37Show/hide
Query:  QQEVKPTTSASNSMENLMRDYMVKNDATLQSQTASLRNLEVQLGQMANELKNRP
        QQ  +P  S ++S+E+LMRDYM KNDA +QSQ ASLRNLEVQLGQ+AN+LKNRP
Subjt:  QQEVKPTTSASNSMENLMRDYMVKNDATLQSQTASLRNLEVQLGQMANELKNRP

XP_030510138.1 uncharacterized protein LOC115724905 [Cannabis sativa]4.2e-1070.37Show/hide
Query:  QQEVKPTTSASNSMENLMRDYMVKNDATLQSQTASLRNLEVQLGQMANELKNRP
        QQ  +P  S ++S+E+LMRDYM KNDA +QSQ ASLRNLEVQLGQ+AN+LKNRP
Subjt:  QQEVKPTTSASNSMENLMRDYMVKNDATLQSQTASLRNLEVQLGQMANELKNRP

TrEMBL top hitse value%identityAlignment
A0A5B6UIR1 Retrovirus-related Pol polyprotein from transposon opus2.3e-0654.55Show/hide
Query:  SQQQEVKPTTSASNSMENLMRDYMVKNDATLQSQTASLRNLEVQLGQMANELKNR
        +Q  +  P T +SNS+ENL++ YMVKND  +QSQ A+L+NLE Q+GQ+A EL++R
Subjt:  SQQQEVKPTTSASNSMENLMRDYMVKNDATLQSQTASLRNLEVQLGQMANELKNR

A0A6J1DVZ9 uncharacterized protein LOC1110249703.1e-1152.5Show/hide
Query:  MSSQQQEVKPTTSASNSMENLMRDYMVKNDATLQSQTASLRNLEVQLGQMANELKNRPIDDLLIKEIQKETLLDHLEKEL
        M +QQQ  +P  ++SNSME +MR+YM +NDA +QSQ A  RNLEVQLGQMAN+LKNRP        +Q + +  H E +L
Subjt:  MSSQQQEVKPTTSASNSMENLMRDYMVKNDATLQSQTASLRNLEVQLGQMANELKNRPIDDLLIKEIQKETLLDHLEKEL

A0A6J1DWK1 uncharacterized protein LOC1110250534.0e-0652.54Show/hide
Query:  QQQEVKPTTSASNSMENLMRDYMVKNDATLQSQTASLRNLEVQLGQMANELKNRPIDDL
        Q  E   +  +  S+EN+M+ YM  NDAT+QSQ ASLRNLE+Q+GQ+A +LK+RP+  L
Subjt:  QQQEVKPTTSASNSMENLMRDYMVKNDATLQSQTASLRNLEVQLGQMANELKNRPIDDL

A0A6J1DYG0 uncharacterized protein LOC1110257642.7e-0751.79Show/hide
Query:  SQQQEVKPTTSASNSMENLMRDYMVKNDATLQSQTASLRNLEVQLGQMANELKNRP
        +Q+ +  P  + ++++EN+M++YM + DA +QSQ AS+RN E QLGQ+ANELKNRP
Subjt:  SQQQEVKPTTSASNSMENLMRDYMVKNDATLQSQTASLRNLEVQLGQMANELKNRP

A0A6J1G7Q6 uncharacterized protein LOC1114515983.0e-0652.46Show/hide
Query:  SSQQQEVKPTTSASNSMENLMRDYMVKNDATLQSQTASLRNLEVQLGQMANELKNRPIDDL
        +SQ Q +  T      +E+L+++YM +NDA +QSQ  SLRNLEVQ+GQ+ANEL+NRP+  L
Subjt:  SSQQQEVKPTTSASNSMENLMRDYMVKNDATLQSQTASLRNLEVQLGQMANELKNRPIDDL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTAGTCAACAGCAGGAAGTGAAGCCAACAACAAGTGCCTCCAATTCTATGGAGAATCTAATGAGAGATTACATGGTGAAGAATGATGCAACACTCCAAAGC
CAAACAGCTTCTCTAAGAAATTTGGAAGTCCAATTGGGGCAAATGGCGAATGAGTTGAAAAATAGGCCCATTGATGACTTGCTGATTAAGGAAATACAAAAGGAG
ACCTTGTTGGATCACTTGGAGAAAGAACTTACCATAGCCTACGAACATGTAGGGGACACTGTTGATGCTGGAGCATCTCAGCCCACGAGCGGCTCCAGTGAAGAA
GAAGAAGATGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTAGTCAACAGCAGGAAGTGAAGCCAACAACAAGTGCCTCCAATTCTATGGAGAATCTAATGAGAGATTACATGGTGAAGAATGATGCAACACTCCAAAGC
CAAACAGCTTCTCTAAGAAATTTGGAAGTCCAATTGGGGCAAATGGCGAATGAGTTGAAAAATAGGCCCATTGATGACTTGCTGATTAAGGAAATACAAAAGGAG
ACCTTGTTGGATCACTTGGAGAAAGAACTTACCATAGCCTACGAACATGTAGGGGACACTGTTGATGCTGGAGCATCTCAGCCCACGAGCGGCTCCAGTGAAGAA
GAAGAAGATGATTGA
Protein sequenceShow/hide protein sequence
MSSQQQEVKPTTSASNSMENLMRDYMVKNDATLQSQTASLRNLEVQLGQMANELKNRPIDDLLIKEIQKETLLDHLEKELTIAYEHVGDTVDAGASQPTSGSSEE
EEDD