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Moc04g26440 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g26440
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr4:19293205..19294047
RNA-Seq ExpressionMoc04g26440
SyntenyMoc04g26440
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022151719.1 uncharacterized protein LOC111019634 [Momordica charantia]2.1e-5057.55Show/hide
Query:  IRHRLRTMEEMYAEATRANRTVSPSSAPGAPGE-REGRVPSFLPGYREPVPNNMGVDYSLQDNDLRKHLTEKKKRASWEPEDSSSYSREFSNSDFKAQSK
        +R ++ TME+MY+E  +A    S S    A  +  E R     P  +         +Y+ Q  DLR+HL  K+  +  + +  S   R   NS+ +A+S 
Subjt:  IRHRLRTMEEMYAEATRANRTVSPSSAPGAPGE-REGRVPSFLPGYREPVPNNMGVDYSLQDNDLRKHLTEKKKRASWEPEDSSSYSREFSNSDFKAQSK

Query:  YTPLTPEAVITREEFDLMKHRFDEQVEALKARCEKKECLFDEGDLGESPFTSDILEAPIPPKFKTPTMKPYGGSKDPKDYVEVFEGLIDFQAATDAIKCR
        Y P+TPE VITREEFD +K +FD QVEALKA+CEKKE  FD+GDLGESPFTSDILEA IP KFKTPTMKPY GSKDPKDYVEVFEGL+DFQAATDAIKCR
Subjt:  YTPLTPEAVITREEFDLMKHRFDEQVEALKARCEKKECLFDEGDLGESPFTSDILEAPIPPKFKTPTMKPYGGSKDPKDYVEVFEGLIDFQAATDAIKCR

Query:  AFQIALTGSAPL
         FQIALTGSA L
Subjt:  AFQIALTGSAPL

XP_022154406.1 uncharacterized protein LOC111021683 [Momordica charantia]3.3e-6781.21Show/hide
Query:  MEEMYAEATRANRTVSPSSAPGAPGEREGRVPSFLPGYREPVPNNMGVDYSLQDNDLRKHLTEKKKRASWEPEDSSSYSREFSNSDFKAQSKYTPLTPEA
        ME+MYAEATRANRT SPS APGAPGE+    PS  PG REP+PN+ G+DYSL+DND+RKHLTEKKKRAS EPEDS SYSR+FSNS+ KAQSKY PL PEA
Subjt:  MEEMYAEATRANRTVSPSSAPGAPGEREGRVPSFLPGYREPVPNNMGVDYSLQDNDLRKHLTEKKKRASWEPEDSSSYSREFSNSDFKAQSKYTPLTPEA

Query:  VITREEFDLMKHRFDEQVEALKARCEKKECLFDEGDLGESPFTSDILEAPIPPKFKTPTMKPYGG
        +ITREEFDLMKH+F EQVEALKARCEKKEC FD GDLGESPFT DILEAPIPPKFKTPTMKPY G
Subjt:  VITREEFDLMKHRFDEQVEALKARCEKKECLFDEGDLGESPFTSDILEAPIPPKFKTPTMKPYGG

XP_022155139.1 uncharacterized protein LOC111022280 [Momordica charantia]2.6e-8084.24Show/hide
Query:  PGAPGEREGRVPSFLPGYREPVPNNMGVDYSLQDNDLRKHLTEKKKRASWEPEDSSSYSREFSNSDFKAQSKYTPLTPEAVITREEFDLMKHRFDEQVEA
        PGAPGE+    PS  PG REP+PN+ GVDYSL+DNDLRKHLT+KKK+ASWEPEDS SYSREFSNS+ KAQSKY PL PEAVI REEFDLMKHRFDEQVEA
Subjt:  PGAPGEREGRVPSFLPGYREPVPNNMGVDYSLQDNDLRKHLTEKKKRASWEPEDSSSYSREFSNSDFKAQSKYTPLTPEAVITREEFDLMKHRFDEQVEA

Query:  LKARCEKKECLFDEGDLGESPFTSDILEAPIPPKFKTPTMKPYGGSKDPKDYVEVFEGLIDFQAATDAIKCRAFQIALTGSAPL
        LKARCEKKE  FD+ DLGESPFTSDI+EAPIPPKFKTPTMKPY GSKDPKDYVEVFEGL+DFQAATDAIKC AFQIALTGSA L
Subjt:  LKARCEKKECLFDEGDLGESPFTSDILEAPIPPKFKTPTMKPYGGSKDPKDYVEVFEGLIDFQAATDAIKCRAFQIALTGSAPL

XP_022157897.1 uncharacterized protein LOC111024503 [Momordica charantia]6.0e-6189.86Show/hide
Query:  RASWEPEDSSSYSREFSNSDFKAQSKYTPLTPEAVITREEFDLMKHRFDEQVEALKARCEKKECLFDEGDLGESPFTSDILEAPIPPKFKTPTMKPYGGS
        RAS E EDS SYSREFSNSDFKAQSKY PLTPEAVITREEFDLMKHRFDEQVEALKA+CEKKEC FD+GDLGESPFTSDILE PIPPKFKTPTMK Y  S
Subjt:  RASWEPEDSSSYSREFSNSDFKAQSKYTPLTPEAVITREEFDLMKHRFDEQVEALKARCEKKECLFDEGDLGESPFTSDILEAPIPPKFKTPTMKPYGGS

Query:  KDPKDYVEVFEGLIDFQAATDAIKCRAFQIALTGSAPL
        KDPKDYVEVFEGL+DFQAATDAIKC AFQIALTGSA L
Subjt:  KDPKDYVEVFEGLIDFQAATDAIKCRAFQIALTGSAPL

XP_022159327.1 uncharacterized protein LOC111025738 [Momordica charantia]1.8e-5752.86Show/hide
Query:  MVEDQVRAGQEGDLPRRSARHANQELPPAHLKPSKANRGRGGTSRKTSRKANQAVDPEALSTLQRELDDIRHRLRTMEEMYAEATRANRTVSPSSAPGAP
        +VE Q+  G   +   RSAR    +L PAH KP KANRGRGG SR+T+  A  A   E    LQ+E++ +R ++ TMEEMY E  +A    S S    A 
Subjt:  MVEDQVRAGQEGDLPRRSARHANQELPPAHLKPSKANRGRGGTSRKTSRKANQAVDPEALSTLQRELDDIRHRLRTMEEMYAEATRANRTVSPSSAPGAP

Query:  GEREGRVPSFLPGYREPVPNNMGVDYSLQDNDLRKHLTEKKKRASWEPEDSSSYSREFSNSDFKAQSKYTPLTPEAVITREEFDLMKHRFDEQVEALKAR
         ER                            DLR HL+ +K+ +S     S S S +  NS+ +A+S Y P+ PE VITREEFD +K +FD QVE LKAR
Subjt:  GEREGRVPSFLPGYREPVPNNMGVDYSLQDNDLRKHLTEKKKRASWEPEDSSSYSREFSNSDFKAQSKYTPLTPEAVITREEFDLMKHRFDEQVEALKAR

Query:  CEKKECLFDEGDLGESPFTSDILEAPIPPKFKTPTMKPYGGSKDPKDYVEVFEGLIDFQAATDAIKCRAFQIALTGSAPL
        CE K   FD+GDLGESPFTSDILEA IP KFKTPTMKPY GSKDPKDYVEVFEGL+ FQAATDAIK RAFQIALT SA L
Subjt:  CEKKECLFDEGDLGESPFTSDILEAPIPPKFKTPTMKPYGGSKDPKDYVEVFEGLIDFQAATDAIKCRAFQIALTGSAPL

TrEMBL top hitse value%identityAlignment
A0A6J1DDW5 uncharacterized protein LOC1110196341.0e-5057.55Show/hide
Query:  IRHRLRTMEEMYAEATRANRTVSPSSAPGAPGE-REGRVPSFLPGYREPVPNNMGVDYSLQDNDLRKHLTEKKKRASWEPEDSSSYSREFSNSDFKAQSK
        +R ++ TME+MY+E  +A    S S    A  +  E R     P  +         +Y+ Q  DLR+HL  K+  +  + +  S   R   NS+ +A+S 
Subjt:  IRHRLRTMEEMYAEATRANRTVSPSSAPGAPGE-REGRVPSFLPGYREPVPNNMGVDYSLQDNDLRKHLTEKKKRASWEPEDSSSYSREFSNSDFKAQSK

Query:  YTPLTPEAVITREEFDLMKHRFDEQVEALKARCEKKECLFDEGDLGESPFTSDILEAPIPPKFKTPTMKPYGGSKDPKDYVEVFEGLIDFQAATDAIKCR
        Y P+TPE VITREEFD +K +FD QVEALKA+CEKKE  FD+GDLGESPFTSDILEA IP KFKTPTMKPY GSKDPKDYVEVFEGL+DFQAATDAIKCR
Subjt:  YTPLTPEAVITREEFDLMKHRFDEQVEALKARCEKKECLFDEGDLGESPFTSDILEAPIPPKFKTPTMKPYGGSKDPKDYVEVFEGLIDFQAATDAIKCR

Query:  AFQIALTGSAPL
         FQIALTGSA L
Subjt:  AFQIALTGSAPL

A0A6J1DNM4 Ribonuclease H1.6e-6781.21Show/hide
Query:  MEEMYAEATRANRTVSPSSAPGAPGEREGRVPSFLPGYREPVPNNMGVDYSLQDNDLRKHLTEKKKRASWEPEDSSSYSREFSNSDFKAQSKYTPLTPEA
        ME+MYAEATRANRT SPS APGAPGE+    PS  PG REP+PN+ G+DYSL+DND+RKHLTEKKKRAS EPEDS SYSR+FSNS+ KAQSKY PL PEA
Subjt:  MEEMYAEATRANRTVSPSSAPGAPGEREGRVPSFLPGYREPVPNNMGVDYSLQDNDLRKHLTEKKKRASWEPEDSSSYSREFSNSDFKAQSKYTPLTPEA

Query:  VITREEFDLMKHRFDEQVEALKARCEKKECLFDEGDLGESPFTSDILEAPIPPKFKTPTMKPYGG
        +ITREEFDLMKH+F EQVEALKARCEKKEC FD GDLGESPFT DILEAPIPPKFKTPTMKPY G
Subjt:  VITREEFDLMKHRFDEQVEALKARCEKKECLFDEGDLGESPFTSDILEAPIPPKFKTPTMKPYGG

A0A6J1DPC9 uncharacterized protein LOC1110222801.3e-8084.24Show/hide
Query:  PGAPGEREGRVPSFLPGYREPVPNNMGVDYSLQDNDLRKHLTEKKKRASWEPEDSSSYSREFSNSDFKAQSKYTPLTPEAVITREEFDLMKHRFDEQVEA
        PGAPGE+    PS  PG REP+PN+ GVDYSL+DNDLRKHLT+KKK+ASWEPEDS SYSREFSNS+ KAQSKY PL PEAVI REEFDLMKHRFDEQVEA
Subjt:  PGAPGEREGRVPSFLPGYREPVPNNMGVDYSLQDNDLRKHLTEKKKRASWEPEDSSSYSREFSNSDFKAQSKYTPLTPEAVITREEFDLMKHRFDEQVEA

Query:  LKARCEKKECLFDEGDLGESPFTSDILEAPIPPKFKTPTMKPYGGSKDPKDYVEVFEGLIDFQAATDAIKCRAFQIALTGSAPL
        LKARCEKKE  FD+ DLGESPFTSDI+EAPIPPKFKTPTMKPY GSKDPKDYVEVFEGL+DFQAATDAIKC AFQIALTGSA L
Subjt:  LKARCEKKECLFDEGDLGESPFTSDILEAPIPPKFKTPTMKPYGGSKDPKDYVEVFEGLIDFQAATDAIKCRAFQIALTGSAPL

A0A6J1DVR0 uncharacterized protein LOC1110245032.9e-6189.86Show/hide
Query:  RASWEPEDSSSYSREFSNSDFKAQSKYTPLTPEAVITREEFDLMKHRFDEQVEALKARCEKKECLFDEGDLGESPFTSDILEAPIPPKFKTPTMKPYGGS
        RAS E EDS SYSREFSNSDFKAQSKY PLTPEAVITREEFDLMKHRFDEQVEALKA+CEKKEC FD+GDLGESPFTSDILE PIPPKFKTPTMK Y  S
Subjt:  RASWEPEDSSSYSREFSNSDFKAQSKYTPLTPEAVITREEFDLMKHRFDEQVEALKARCEKKECLFDEGDLGESPFTSDILEAPIPPKFKTPTMKPYGGS

Query:  KDPKDYVEVFEGLIDFQAATDAIKCRAFQIALTGSAPL
        KDPKDYVEVFEGL+DFQAATDAIKC AFQIALTGSA L
Subjt:  KDPKDYVEVFEGLIDFQAATDAIKCRAFQIALTGSAPL

A0A6J1DZJ1 uncharacterized protein LOC1110257388.8e-5852.86Show/hide
Query:  MVEDQVRAGQEGDLPRRSARHANQELPPAHLKPSKANRGRGGTSRKTSRKANQAVDPEALSTLQRELDDIRHRLRTMEEMYAEATRANRTVSPSSAPGAP
        +VE Q+  G   +   RSAR    +L PAH KP KANRGRGG SR+T+  A  A   E    LQ+E++ +R ++ TMEEMY E  +A    S S    A 
Subjt:  MVEDQVRAGQEGDLPRRSARHANQELPPAHLKPSKANRGRGGTSRKTSRKANQAVDPEALSTLQRELDDIRHRLRTMEEMYAEATRANRTVSPSSAPGAP

Query:  GEREGRVPSFLPGYREPVPNNMGVDYSLQDNDLRKHLTEKKKRASWEPEDSSSYSREFSNSDFKAQSKYTPLTPEAVITREEFDLMKHRFDEQVEALKAR
         ER                            DLR HL+ +K+ +S     S S S +  NS+ +A+S Y P+ PE VITREEFD +K +FD QVE LKAR
Subjt:  GEREGRVPSFLPGYREPVPNNMGVDYSLQDNDLRKHLTEKKKRASWEPEDSSSYSREFSNSDFKAQSKYTPLTPEAVITREEFDLMKHRFDEQVEALKAR

Query:  CEKKECLFDEGDLGESPFTSDILEAPIPPKFKTPTMKPYGGSKDPKDYVEVFEGLIDFQAATDAIKCRAFQIALTGSAPL
        CE K   FD+GDLGESPFTSDILEA IP KFKTPTMKPY GSKDPKDYVEVFEGL+ FQAATDAIK RAFQIALT SA L
Subjt:  CEKKECLFDEGDLGESPFTSDILEAPIPPKFKTPTMKPYGGSKDPKDYVEVFEGLIDFQAATDAIKCRAFQIALTGSAPL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAGAGGATCAGGTTCGAGCAGGACAAGAGGGAGATCTTCCACGGAGATCGGCCCGCCACGCGAACCAAGAGTTACCCCCTGCTCACCTGAAACCCTCAAAGGCCAA
CCGAGGCCGAGGTGGGACCTCGAGAAAGACCTCCCGAAAGGCCAACCAGGCGGTAGACCCTGAGGCTTTGTCTACTCTCCAGCGCGAGTTGGATGATATACGCCATCGGT
TGCGTACAATGGAAGAAATGTACGCCGAGGCGACGCGGGCTAACCGAACAGTGTCTCCCTCCAGTGCCCCAGGCGCACCCGGAGAGAGGGAAGGTCGGGTTCCATCTTTC
CTTCCTGGCTACCGCGAGCCCGTTCCCAACAATATGGGGGTGGATTATAGCTTGCAGGATAACGATCTGAGAAAGCACCTCACTGAAAAGAAGAAGAGAGCATCTTGGGA
GCCGGAAGACTCTTCGTCCTACTCTCGAGAGTTCTCCAATTCTGACTTCAAGGCTCAATCAAAGTATACGCCTCTAACACCAGAAGCTGTGATCACCAGGGAAGAGTTCG
ACCTGATGAAGCACAGGTTCGACGAGCAGGTCGAGGCGCTCAAAGCCAGGTGCGAGAAGAAAGAGTGCTTGTTTGACGAAGGCGACTTGGGAGAATCACCATTCACCTCG
GACATCCTGGAGGCCCCAATTCCTCCAAAGTTCAAAACTCCTACTATGAAACCTTATGGTGGGTCTAAAGACCCGAAGGATTATGTTGAGGTCTTCGAGGGCCTCATAGA
CTTTCAAGCGGCAACAGATGCGATAAAATGCCGCGCCTTCCAGATCGCTCTCACCGGCAGCGCGCCCCTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTAGAGGATCAGGTTCGAGCAGGACAAGAGGGAGATCTTCCACGGAGATCGGCCCGCCACGCGAACCAAGAGTTACCCCCTGCTCACCTGAAACCCTCAAAGGCCAA
CCGAGGCCGAGGTGGGACCTCGAGAAAGACCTCCCGAAAGGCCAACCAGGCGGTAGACCCTGAGGCTTTGTCTACTCTCCAGCGCGAGTTGGATGATATACGCCATCGGT
TGCGTACAATGGAAGAAATGTACGCCGAGGCGACGCGGGCTAACCGAACAGTGTCTCCCTCCAGTGCCCCAGGCGCACCCGGAGAGAGGGAAGGTCGGGTTCCATCTTTC
CTTCCTGGCTACCGCGAGCCCGTTCCCAACAATATGGGGGTGGATTATAGCTTGCAGGATAACGATCTGAGAAAGCACCTCACTGAAAAGAAGAAGAGAGCATCTTGGGA
GCCGGAAGACTCTTCGTCCTACTCTCGAGAGTTCTCCAATTCTGACTTCAAGGCTCAATCAAAGTATACGCCTCTAACACCAGAAGCTGTGATCACCAGGGAAGAGTTCG
ACCTGATGAAGCACAGGTTCGACGAGCAGGTCGAGGCGCTCAAAGCCAGGTGCGAGAAGAAAGAGTGCTTGTTTGACGAAGGCGACTTGGGAGAATCACCATTCACCTCG
GACATCCTGGAGGCCCCAATTCCTCCAAAGTTCAAAACTCCTACTATGAAACCTTATGGTGGGTCTAAAGACCCGAAGGATTATGTTGAGGTCTTCGAGGGCCTCATAGA
CTTTCAAGCGGCAACAGATGCGATAAAATGCCGCGCCTTCCAGATCGCTCTCACCGGCAGCGCGCCCCTGTAG
Protein sequenceShow/hide protein sequence
MVEDQVRAGQEGDLPRRSARHANQELPPAHLKPSKANRGRGGTSRKTSRKANQAVDPEALSTLQRELDDIRHRLRTMEEMYAEATRANRTVSPSSAPGAPGEREGRVPSF
LPGYREPVPNNMGVDYSLQDNDLRKHLTEKKKRASWEPEDSSSYSREFSNSDFKAQSKYTPLTPEAVITREEFDLMKHRFDEQVEALKARCEKKECLFDEGDLGESPFTS
DILEAPIPPKFKTPTMKPYGGSKDPKDYVEVFEGLIDFQAATDAIKCRAFQIALTGSAPL