; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc04g27770 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g27770
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr4:20498877..20500208
RNA-Seq ExpressionMoc04g27770
SyntenyMoc04g27770
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN65484.1 hypothetical protein VITISV_029474 [Vitis vinifera]8.7e-5531.67Show/hide
Query:  KRLQKWRSLLLSKGGRLTLAQSVLNSIPIYFFSILKAPETIIKSMEKLMRDFIWNGGISRSVGNLVKWSWSALPHTQGGLGIGSLRLNNNALLMKWLWQF
        +RL  W+   LS GGR+TL QS L  +P YF S+ K P ++   +E++ RDF+W+G       +LV W     P ++GGLG G + + N ALL KWLW++
Subjt:  KRLQKWRSLLLSKGGRLTLAQSVLNSIPIYFFSILKAPETIIKSMEKLMRDFIWNGGISRSVGNLVKWSWSALPHTQGGLGIGSLRLNNNALLMKWLWQF

Query:  TVERDSLWRRVIATIYVVESFGWCTKPSDGSSIGRPWRDIQENLRDFQKFSFFKVSSGMSIA---DCWCAEAS---------------------------
          E  +LW +VI +IY   S GW        S   PW+ I    ++F KF+ F V +G  I    D W  E                             
Subjt:  TVERDSLWRRVIATIYVVESFGWCTKPSDGSSIGRPWRDIQENLRDFQKFSFFKVSSGMSIA---DCWCAEAS---------------------------

Query:  --TWNLRFRRNLFEREMSRWANFTEKIEGAAIGNG-RDILWWKADPSGRFTVNSAFMALTSPSPKLNSATANLIWNFKVP--------------------
          +WN  FRRNL + E+       + ++   I +   D   W   PSG FTV S F+AL+  S          +WN +VP                    
Subjt:  --TWNLRFRRNLFEREMSRWANFTEKIEGAAIGNG-RDILWWKADPSGRFTVNSAFMALTSPSPKLNSATANLIWNFKVP--------------------

Query:  ---------------KKCMSNNETVDHLFLHCPFVSKAWGFIASLLDLSLCIPRRIEDFIAEGYGGRQLKAKAWVLWNCAARALSWSIWKERNSQLFEDK
                       K CM + ETVDHLFLHC      W  +     +    PR I D ++  + G     +  VLW  A  A+ W +W+ERN+++FEDK
Subjt:  ---------------KKCMSNNETVDHLFLHCPFVSKAWGFIASLLDLSLCIPRRIEDFIAEGYGGRQLKAKAWVLWNCAARALSWSIWKERNSQLFEDK

Query:  L----ILFDSFCVNTKHLASWWALLYKKVFCNYNLPLLRQDW
              L+DS C     L S+WA    KVF    L +L+ DW
Subjt:  L----ILFDSFCVNTKHLASWWALLYKKVFCNYNLPLLRQDW

CAN72359.1 hypothetical protein VITISV_000131 [Vitis vinifera]1.1e-5431.9Show/hide
Query:  KRLQKWRSLLLSKGGRLTLAQSVLNSIPIYFFSILKAPETIIKSMEKLMRDFIWNGGISRSVGNLVKWSWSALPHTQGGLGIGSLRLNNNALLMKWLWQF
        +RL  W+   LS GGR+TL QS L  +P YF S+ K P ++   +E++ RDF+W+G       +LV W     P ++GGLG G + + N ALL KWLW++
Subjt:  KRLQKWRSLLLSKGGRLTLAQSVLNSIPIYFFSILKAPETIIKSMEKLMRDFIWNGGISRSVGNLVKWSWSALPHTQGGLGIGSLRLNNNALLMKWLWQF

Query:  TVERDSLWRRVIATIYVVESFGWCTKPSDGSSIGRPWRDIQENLRDFQKFSFFKVSSGMSIA---DCWCAEAS---------------------------
          E  +LW +VI +IY   S GW        S   PW+ I    ++F KF+ F V +G  I    D W  E                             
Subjt:  TVERDSLWRRVIATIYVVESFGWCTKPSDGSSIGRPWRDIQENLRDFQKFSFFKVSSGMSIA---DCWCAEAS---------------------------

Query:  --TWNLRFRRNLFEREMSRWANFTEKIEGAAIGNG-RDILWWKADPSGRFTVNSAFMALTSPSPKLNSATANLIWNFKVP--------------------
          +WN  FRRNL + E+       +  +   I +   D   W   PSG FTV   F+AL+  S          +WN +VP                    
Subjt:  --TWNLRFRRNLFEREMSRWANFTEKIEGAAIGNG-RDILWWKADPSGRFTVNSAFMALTSPSPKLNSATANLIWNFKVP--------------------

Query:  ---------------KKCMSNNETVDHLFLHCPFVSKAWGFIASLLDLSLCIPRRIEDFIAEGYGGRQLKAKAWVLWNCAARALSWSIWKERNSQLFEDK
                       K CM + ETVDHLFLHC      W  +     +    PR I D +A  + G     +  VLW  A  AL W +W+ERN+++FEDK
Subjt:  ---------------KKCMSNNETVDHLFLHCPFVSKAWGFIASLLDLSLCIPRRIEDFIAEGYGGRQLKAKAWVLWNCAARALSWSIWKERNSQLFEDK

Query:  L----ILFDSFCVNTKHLASWWALLYKKVFCNYNLPLLRQDW
              L+DS C     L S+WA    KVF    L +L+ DW
Subjt:  L----ILFDSFCVNTKHLASWWALLYKKVFCNYNLPLLRQDW

KAB2623078.1 ribonuclease H protein [Pyrus ussuriensis x Pyrus communis]1.6e-5631.54Show/hide
Query:  MHKRLQKWRSLLLSKGGRLTLAQSVLNSIPIYFFSILKAPETIIKSMEKLMRDFIWNGGISRSVGNLVKWSWSALPHTQGGLGIGSLRLNNNALLMKWLW
        M KRLQ W+   LS+GGRLTL QSVL S+PIY+ S+ K P  +I  +EKLM+ F+W G       +LVKW        +GGLG+G+LR  N ALL KWLW
Subjt:  MHKRLQKWRSLLLSKGGRLTLAQSVLNSIPIYFFSILKAPETIIKSMEKLMRDFIWNGGISRSVGNLVKWSWSALPHTQGGLGIGSLRLNNNALLMKWLW

Query:  QFTVERDSLWRRVIATIYVVESFGWCTKPSDGSSIGRPWRDIQENLRDFQKFSFFKVSSGMSIADCW---------------------------------
        +F  E +SLW +VI T Y ++  GW   P    S   PW+DI   L+ F +   FKV +G  +  CW                                 
Subjt:  QFTVERDSLWRRVIATIYVVESFGWCTKPSDGSSIGRPWRDIQENLRDFQKFSFFKVSSGMSIADCW---------------------------------

Query:  -CAEASTWNLRFRRNLFEREMSRWANFTEKIEGAAIGNGR-DILWWKADPSGRFTVNSAFMALTSPSPKLNSATANLIWNFKVPKK--------------
              +WN  FRRNL E E+   A   +K+E   +   R D   WK D SG FT  S    L++     +   ++ IW  KVP K              
Subjt:  -CAEASTWNLRFRRNLFEREMSRWANFTEKIEGAAIGNGR-DILWWKADPSGRFTVNSAFMALTSPSPKLNSATANLIWNFKVPKK--------------

Query:  ---------------------CMSNNETVDHLFLHCPFVSKAWGFIASLLDLSLCIPRRIEDFIAEGYGGRQLKAKAWVLWNCAARALSWSIWKERNSQL
                             C +  E+V+H+FLHC +  + W  +   + +S  IP+   + ++  +    +  KA  LW C   A+ W+IW ERN ++
Subjt:  ---------------------CMSNNETVDHLFLHCPFVSKAWGFIASLLDLSLCIPRRIEDFIAEGYGGRQLKAKAWVLWNCAARALSWSIWKERNSQL

Query:  FEDKL-ILFDSFCVNTKHLASWWALLYKKVFCNYNLPLLRQDWKVVI
        F+D   +         ++ A++WA +  + F NY+L  +  D   V+
Subjt:  FEDKL-ILFDSFCVNTKHLASWWALLYKKVFCNYNLPLLRQDWKVVI

RVW52490.1 putative ribonuclease H protein [Vitis vinifera]5.1e-5532.13Show/hide
Query:  KRLQKWRSLLLSKGGRLTLAQSVLNSIPIYFFSILKAPETIIKSMEKLMRDFIWNGGISRSVGNLVKWSWSALPHTQGGLGIGSLRLNNNALLMKWLWQF
        +RL  W+   LS GGR+TL QS L  +P YF S+ K P ++   +E++ R+F+W+G       +LV W     P ++GGLG G + + N ALL KWLW++
Subjt:  KRLQKWRSLLLSKGGRLTLAQSVLNSIPIYFFSILKAPETIIKSMEKLMRDFIWNGGISRSVGNLVKWSWSALPHTQGGLGIGSLRLNNNALLMKWLWQF

Query:  TVERDSLWRRVIATIYVVESFGWCTKPSDGSSIGRPWRDIQENLRDFQKFSFFKVSSGMSIA---DCWCAEAS---------------------------
          E  +LW +VI +IY   S GW    +   S   PW+ I    ++F KF+ F V  G  I    D W  +                             
Subjt:  TVERDSLWRRVIATIYVVESFGWCTKPSDGSSIGRPWRDIQENLRDFQKFSFFKVSSGMSIA---DCWCAEAS---------------------------

Query:  --TWNLRFRRNLFEREMSRWANFTEKIEGAAIG-NGRDILWWKADPSGRFTVNSAFMALTSPSPKLNSATANLIWNFKVP--------------------
          +WN  FRRNL + E+    +    ++   I  +  D   W   PSG FTV S F+AL+  S          +WN +VP                    
Subjt:  --TWNLRFRRNLFEREMSRWANFTEKIEGAAIG-NGRDILWWKADPSGRFTVNSAFMALTSPSPKLNSATANLIWNFKVP--------------------

Query:  ---------------KKCMSNNETVDHLFLHCPFVSKAWGFIASLLDLSLCIPRRIEDFIAEGYGGRQLKAKAWVLWNCAARALSWSIWKERNSQLFEDK
                       K CM + ETVDHLFLHC      W  +  L  +    PR I D     + G     K  VLW  A  AL W +W+ERN+++FEDK
Subjt:  ---------------KKCMSNNETVDHLFLHCPFVSKAWGFIASLLDLSLCIPRRIEDFIAEGYGGRQLKAKAWVLWNCAARALSWSIWKERNSQLFEDK

Query:  L----ILFDSFCVNTKHLASWWALLYKKVFCNYNLPLLRQDWKVV
              L+DS C     LAS WA    KVF    L +L+ DW  V
Subjt:  L----ILFDSFCVNTKHLASWWALLYKKVFCNYNLPLLRQDWKVV

RVW80860.1 putative ribonuclease H protein [Vitis vinifera]3.0e-5532.13Show/hide
Query:  KRLQKWRSLLLSKGGRLTLAQSVLNSIPIYFFSILKAPETIIKSMEKLMRDFIWNGGISRSVGNLVKWSWSALPHTQGGLGIGSLRLNNNALLMKWLWQF
        +RL  W+   LS GGR+TL QS L  +P YF S+ K P ++   +E++ RDF+W+G       +LV W     P ++GGLG G + + N ALL KWLW++
Subjt:  KRLQKWRSLLLSKGGRLTLAQSVLNSIPIYFFSILKAPETIIKSMEKLMRDFIWNGGISRSVGNLVKWSWSALPHTQGGLGIGSLRLNNNALLMKWLWQF

Query:  TVERDSLWRRVIATIYVVESFGWCTKPSDGSSIGRPWRDIQENLRDFQKFSFFKVSSGMSIA---DCWCAEAS---------------------------
          E  +LW +VI +IY   S GW        S   PW+ I    ++F KF+ F V +G  I    D W  E                             
Subjt:  TVERDSLWRRVIATIYVVESFGWCTKPSDGSSIGRPWRDIQENLRDFQKFSFFKVSSGMSIA---DCWCAEAS---------------------------

Query:  --TWNLRFRRNLFEREMSRWANFTEKIEGAAIGNG-RDILWWKADPSGRFTVNSAFMALTSPSPKLNSATANLIWNFKVP--------------------
          +WN  FRRNL + E+       +  +   I +   D   W   PSG FTV S F+AL+  S          +WN +VP                    
Subjt:  --TWNLRFRRNLFEREMSRWANFTEKIEGAAIGNG-RDILWWKADPSGRFTVNSAFMALTSPSPKLNSATANLIWNFKVP--------------------

Query:  ---------------KKCMSNNETVDHLFLHCPFVSKAWGFIASLLDLSLCIPRRIEDFIAEGYGGRQLKAKAWVLWNCAARALSWSIWKERNSQLFEDK
                       K CM + ETVDHLFLHC      W  +     +    PR I D +A  + G     +  VLW  A  AL W +W+ERN+++FEDK
Subjt:  ---------------KKCMSNNETVDHLFLHCPFVSKAWGFIASLLDLSLCIPRRIEDFIAEGYGGRQLKAKAWVLWNCAARALSWSIWKERNSQLFEDK

Query:  L----ILFDSFCVNTKHLASWWALLYKKVFCNYNLPLLRQDW
              L+DS C     L S+WA    KVF    L +L+ DW
Subjt:  L----ILFDSFCVNTKHLASWWALLYKKVFCNYNLPLLRQDW

TrEMBL top hitse value%identityAlignment
A0A438EXL3 Putative ribonuclease H protein2.5e-5532.13Show/hide
Query:  KRLQKWRSLLLSKGGRLTLAQSVLNSIPIYFFSILKAPETIIKSMEKLMRDFIWNGGISRSVGNLVKWSWSALPHTQGGLGIGSLRLNNNALLMKWLWQF
        +RL  W+   LS GGR+TL QS L  +P YF S+ K P ++   +E++ R+F+W+G       +LV W     P ++GGLG G + + N ALL KWLW++
Subjt:  KRLQKWRSLLLSKGGRLTLAQSVLNSIPIYFFSILKAPETIIKSMEKLMRDFIWNGGISRSVGNLVKWSWSALPHTQGGLGIGSLRLNNNALLMKWLWQF

Query:  TVERDSLWRRVIATIYVVESFGWCTKPSDGSSIGRPWRDIQENLRDFQKFSFFKVSSGMSIA---DCWCAEAS---------------------------
          E  +LW +VI +IY   S GW    +   S   PW+ I    ++F KF+ F V  G  I    D W  +                             
Subjt:  TVERDSLWRRVIATIYVVESFGWCTKPSDGSSIGRPWRDIQENLRDFQKFSFFKVSSGMSIA---DCWCAEAS---------------------------

Query:  --TWNLRFRRNLFEREMSRWANFTEKIEGAAIG-NGRDILWWKADPSGRFTVNSAFMALTSPSPKLNSATANLIWNFKVP--------------------
          +WN  FRRNL + E+    +    ++   I  +  D   W   PSG FTV S F+AL+  S          +WN +VP                    
Subjt:  --TWNLRFRRNLFEREMSRWANFTEKIEGAAIG-NGRDILWWKADPSGRFTVNSAFMALTSPSPKLNSATANLIWNFKVP--------------------

Query:  ---------------KKCMSNNETVDHLFLHCPFVSKAWGFIASLLDLSLCIPRRIEDFIAEGYGGRQLKAKAWVLWNCAARALSWSIWKERNSQLFEDK
                       K CM + ETVDHLFLHC      W  +  L  +    PR I D     + G     K  VLW  A  AL W +W+ERN+++FEDK
Subjt:  ---------------KKCMSNNETVDHLFLHCPFVSKAWGFIASLLDLSLCIPRRIEDFIAEGYGGRQLKAKAWVLWNCAARALSWSIWKERNSQLFEDK

Query:  L----ILFDSFCVNTKHLASWWALLYKKVFCNYNLPLLRQDWKVV
              L+DS C     LAS WA    KVF    L +L+ DW  V
Subjt:  L----ILFDSFCVNTKHLASWWALLYKKVFCNYNLPLLRQDWKVV

A0A438H8I3 Putative ribonuclease H protein1.4e-5532.13Show/hide
Query:  KRLQKWRSLLLSKGGRLTLAQSVLNSIPIYFFSILKAPETIIKSMEKLMRDFIWNGGISRSVGNLVKWSWSALPHTQGGLGIGSLRLNNNALLMKWLWQF
        +RL  W+   LS GGR+TL QS L  +P YF S+ K P ++   +E++ RDF+W+G       +LV W     P ++GGLG G + + N ALL KWLW++
Subjt:  KRLQKWRSLLLSKGGRLTLAQSVLNSIPIYFFSILKAPETIIKSMEKLMRDFIWNGGISRSVGNLVKWSWSALPHTQGGLGIGSLRLNNNALLMKWLWQF

Query:  TVERDSLWRRVIATIYVVESFGWCTKPSDGSSIGRPWRDIQENLRDFQKFSFFKVSSGMSIA---DCWCAEAS---------------------------
          E  +LW +VI +IY   S GW        S   PW+ I    ++F KF+ F V +G  I    D W  E                             
Subjt:  TVERDSLWRRVIATIYVVESFGWCTKPSDGSSIGRPWRDIQENLRDFQKFSFFKVSSGMSIA---DCWCAEAS---------------------------

Query:  --TWNLRFRRNLFEREMSRWANFTEKIEGAAIGNG-RDILWWKADPSGRFTVNSAFMALTSPSPKLNSATANLIWNFKVP--------------------
          +WN  FRRNL + E+       +  +   I +   D   W   PSG FTV S F+AL+  S          +WN +VP                    
Subjt:  --TWNLRFRRNLFEREMSRWANFTEKIEGAAIGNG-RDILWWKADPSGRFTVNSAFMALTSPSPKLNSATANLIWNFKVP--------------------

Query:  ---------------KKCMSNNETVDHLFLHCPFVSKAWGFIASLLDLSLCIPRRIEDFIAEGYGGRQLKAKAWVLWNCAARALSWSIWKERNSQLFEDK
                       K CM + ETVDHLFLHC      W  +     +    PR I D +A  + G     +  VLW  A  AL W +W+ERN+++FEDK
Subjt:  ---------------KKCMSNNETVDHLFLHCPFVSKAWGFIASLLDLSLCIPRRIEDFIAEGYGGRQLKAKAWVLWNCAARALSWSIWKERNSQLFEDK

Query:  L----ILFDSFCVNTKHLASWWALLYKKVFCNYNLPLLRQDW
              L+DS C     L S+WA    KVF    L +L+ DW
Subjt:  L----ILFDSFCVNTKHLASWWALLYKKVFCNYNLPLLRQDW

A0A5N5H648 Ribonuclease H protein7.6e-5731.54Show/hide
Query:  MHKRLQKWRSLLLSKGGRLTLAQSVLNSIPIYFFSILKAPETIIKSMEKLMRDFIWNGGISRSVGNLVKWSWSALPHTQGGLGIGSLRLNNNALLMKWLW
        M KRLQ W+   LS+GGRLTL QSVL S+PIY+ S+ K P  +I  +EKLM+ F+W G       +LVKW        +GGLG+G+LR  N ALL KWLW
Subjt:  MHKRLQKWRSLLLSKGGRLTLAQSVLNSIPIYFFSILKAPETIIKSMEKLMRDFIWNGGISRSVGNLVKWSWSALPHTQGGLGIGSLRLNNNALLMKWLW

Query:  QFTVERDSLWRRVIATIYVVESFGWCTKPSDGSSIGRPWRDIQENLRDFQKFSFFKVSSGMSIADCW---------------------------------
        +F  E +SLW +VI T Y ++  GW   P    S   PW+DI   L+ F +   FKV +G  +  CW                                 
Subjt:  QFTVERDSLWRRVIATIYVVESFGWCTKPSDGSSIGRPWRDIQENLRDFQKFSFFKVSSGMSIADCW---------------------------------

Query:  -CAEASTWNLRFRRNLFEREMSRWANFTEKIEGAAIGNGR-DILWWKADPSGRFTVNSAFMALTSPSPKLNSATANLIWNFKVPKK--------------
              +WN  FRRNL E E+   A   +K+E   +   R D   WK D SG FT  S    L++     +   ++ IW  KVP K              
Subjt:  -CAEASTWNLRFRRNLFEREMSRWANFTEKIEGAAIGNGR-DILWWKADPSGRFTVNSAFMALTSPSPKLNSATANLIWNFKVPKK--------------

Query:  ---------------------CMSNNETVDHLFLHCPFVSKAWGFIASLLDLSLCIPRRIEDFIAEGYGGRQLKAKAWVLWNCAARALSWSIWKERNSQL
                             C +  E+V+H+FLHC +  + W  +   + +S  IP+   + ++  +    +  KA  LW C   A+ W+IW ERN ++
Subjt:  ---------------------CMSNNETVDHLFLHCPFVSKAWGFIASLLDLSLCIPRRIEDFIAEGYGGRQLKAKAWVLWNCAARALSWSIWKERNSQL

Query:  FEDKL-ILFDSFCVNTKHLASWWALLYKKVFCNYNLPLLRQDWKVVI
        F+D   +         ++ A++WA +  + F NY+L  +  D   V+
Subjt:  FEDKL-ILFDSFCVNTKHLASWWALLYKKVFCNYNLPLLRQDWKVVI

A0A803P465 Uncharacterized protein2.0e-5734.16Show/hide
Query:  KRLQKWRSLLLSKGGRLTLAQSVLNSIPIYFFSILKAPETIIKSMEKLMRDFIWNGGISRSVGNLVKWSWSALPHTQGGLGIGSLRLNNNALLMKWLWQF
        KRL  W+   LSKGGRLTL QSVL+S+P+YF S+ KAP ++ K++EK+MRDF+W G  S    +LV W     P  +GGLGIG L L N +LLMKWLW+F
Subjt:  KRLQKWRSLLLSKGGRLTLAQSVLNSIPIYFFSILKAPETIIKSMEKLMRDFIWNGGISRSVGNLVKWSWSALPHTQGGLGIGSLRLNNNALLMKWLWQF

Query:  TVERDSLWRRVIATIYVVESFGWCTKPSDGSSIGRPWRDIQENLRDFQKFSFFKVSSGMSI---ADCWCAE-----------------------------
         +E++SLW RV+ + Y      W +K     S   PWRDI +   +F     FK+  G  I    D W  +                             
Subjt:  TVERDSLWRRVIATIYVVESFGWCTKPSDGSSIGRPWRDIQENLRDFQKFSFFKVSSGMSI---ADCWCAE-----------------------------

Query:  -----ASTWNLRFRRNLFEREMSRWANFTEKIEGA-AIGNGRDILWWKADPSGRFTVNSAFMALTS-PSPKLNSATANLIWNFKVPKK------------
               +WN +FRRNL +RE+    +  +K+E    +    D   WK DPSG F+  SAF  + S PS ++   T +L W    P K            
Subjt:  -----ASTWNLRFRRNLFEREMSRWANFTEKIEGA-AIGNGRDILWWKADPSGRFTVNSAFMALTS-PSPKLNSATANLIWNFKVPKK------------

Query:  -----------------------CMSNNETVDHLFLHCPFVSKAWGFIASLLDLSLCIPRRIEDFIAEGYGGRQLKAKAWVLWNCAARALSWSIWKERNS
                               C  + E+V HLFL C F+ + W ++     LS  +PR +   IA    G + K K   LW  A  A  W++W ERN+
Subjt:  -----------------------CMSNNETVDHLFLHCPFVSKAWGFIASLLDLSLCIPRRIEDFIAEGYGGRQLKAKAWVLWNCAARALSWSIWKERNS

Query:  QLFE
        ++FE
Subjt:  QLFE

A5BCI7 Reverse transcriptase domain-containing protein4.2e-5531.67Show/hide
Query:  KRLQKWRSLLLSKGGRLTLAQSVLNSIPIYFFSILKAPETIIKSMEKLMRDFIWNGGISRSVGNLVKWSWSALPHTQGGLGIGSLRLNNNALLMKWLWQF
        +RL  W+   LS GGR+TL QS L  +P YF S+ K P ++   +E++ RDF+W+G       +LV W     P ++GGLG G + + N ALL KWLW++
Subjt:  KRLQKWRSLLLSKGGRLTLAQSVLNSIPIYFFSILKAPETIIKSMEKLMRDFIWNGGISRSVGNLVKWSWSALPHTQGGLGIGSLRLNNNALLMKWLWQF

Query:  TVERDSLWRRVIATIYVVESFGWCTKPSDGSSIGRPWRDIQENLRDFQKFSFFKVSSGMSIA---DCWCAEAS---------------------------
          E  +LW +VI +IY   S GW        S   PW+ I    ++F KF+ F V +G  I    D W  E                             
Subjt:  TVERDSLWRRVIATIYVVESFGWCTKPSDGSSIGRPWRDIQENLRDFQKFSFFKVSSGMSIA---DCWCAEAS---------------------------

Query:  --TWNLRFRRNLFEREMSRWANFTEKIEGAAIGNG-RDILWWKADPSGRFTVNSAFMALTSPSPKLNSATANLIWNFKVP--------------------
          +WN  FRRNL + E+       + ++   I +   D   W   PSG FTV S F+AL+  S          +WN +VP                    
Subjt:  --TWNLRFRRNLFEREMSRWANFTEKIEGAAIGNG-RDILWWKADPSGRFTVNSAFMALTSPSPKLNSATANLIWNFKVP--------------------

Query:  ---------------KKCMSNNETVDHLFLHCPFVSKAWGFIASLLDLSLCIPRRIEDFIAEGYGGRQLKAKAWVLWNCAARALSWSIWKERNSQLFEDK
                       K CM + ETVDHLFLHC      W  +     +    PR I D ++  + G     +  VLW  A  A+ W +W+ERN+++FEDK
Subjt:  ---------------KKCMSNNETVDHLFLHCPFVSKAWGFIASLLDLSLCIPRRIEDFIAEGYGGRQLKAKAWVLWNCAARALSWSIWKERNSQLFEDK

Query:  L----ILFDSFCVNTKHLASWWALLYKKVFCNYNLPLLRQDW
              L+DS C     L S+WA    KVF    L +L+ DW
Subjt:  L----ILFDSFCVNTKHLASWWALLYKKVFCNYNLPLLRQDW

SwissProt top hitse value%identityAlignment
P08548 LINE-1 reverse transcriptase homolog9.4e-0425.89Show/hide
Query:  LQKWRSLLLSKGGRLTLAQSVLNSIPIYFFSI--LKAPETIIKSMEKLMRDFIWNGGISRSVGNLVKWSWSALPHTQGGLGIGSLRLNNNALLMKWLWQF
        + KW+++  S  GR+ + +  +    IY F+   +KAP +  K +EK++  FIWN    +    L+     +  +  GG+ +  LRL   ++++K  W +
Subjt:  LQKWRSLLLSKGGRLTLAQSVLNSIPIYFFSI--LKAPETIIKSMEKLMRDFIWNGGISRSVGNLVKWSWSALPHTQGGLGIGSLRLNNNALLMKWLWQF

Query:  TVERD-SLWRRV
           R+  +W R+
Subjt:  TVERD-SLWRRV

P0C2F6 Putative ribonuclease H protein At1g657502.0e-2228.47Show/hide
Query:  RLQKWRSLLLSKGGRLTLAQSVLNSIPIYFFSILKAPETIIKSMEKLMRDFIWNGGISRSVGNLVKWSWSALPHTQGGLGIGSLRLNNNALLMKWLWQFT
        R+  WR   LS  GRLTL ++VL+S+P++  S +  P++I+  +++L R F+W     +   +LVKWS    P  +GGLG+ + +  N AL+ K  W+  
Subjt:  RLQKWRSLLLSKGGRLTLAQSVLNSIPIYFFSILKAPETIIKSMEKLMRDFIWNGGISRSVGNLVKWSWSALPHTQGGLGIGSLRLNNNALLMKWLWQFT

Query:  VERDSLWRRVIATIY---VVESFGWCTKPSDGSSIGRPWRDIQENLRDF------------QKFSFF-----------KVSSGMSIADCWCAEASTWNLR
         E++SLW  V+   Y    +    W       SS    WR I   LRD             Q+  F+           ++ +G    DC    A    + 
Subjt:  VERDSLWRRVIATIY---VVESFGWCTKPSDGSSIGRPWRDIQENLRDF------------QKFSFF-----------KVSSGMSIADCWCAEASTWNLR

Query:  FRRNLFEREMSRWANFTEKIEGAA-----IGNGRDILWWKADPSGRFTVNSAFMALT-SPSPKLNSAT-ANLIWNFKVPKK
         R   F + +  +     ++E  A     +   RD L WK    G+F+V SA+  LT    P+ N A+  N +W  +VP++
Subjt:  FRRNLFEREMSRWANFTEKIEGAA-----IGNGRDILWWKADPSGRFTVNSAFMALT-SPSPKLNSAT-ANLIWNFKVPKK

Arabidopsis top hitse value%identityAlignment
AT3G24255.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein1.4e-1030.43Show/hide
Query:  RLQKWRSLLLSKGGRLTLAQSVLNSIPIYFFSILKAPETIIKSMEKLMRDFIWNGGISRSVGNLVKWSWSALPHTQGGLGIGSLR---------LNNNAL
        R+ KW +  LS  GRL L  SV++S+  ++ S  + P   IK ++ +   F+W+G    +    V WS    P  +GGLGI SL+         ++ N  
Subjt:  RLQKWRSLLLSKGGRLTLAQSVLNSIPIYFFSILKAPETIIKSMEKLMRDFIWNGGISRSVGNLVKWSWSALPHTQGGLGIGSLR---------LNNNAL

Query:  LMKWLWQFTVERDSL
        L  W+W+  ++  +L
Subjt:  LMKWLWQFTVERDSL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACAAAAGACTCCAAAAATGGAGATCTTTGCTTCTTTCCAAGGGTGGTAGGCTTACTCTTGCTCAGTCGGTCCTCAATAGCATCCCCATATACTTCTTTTCAATTCT
CAAAGCTCCAGAGACCATCATAAAGTCTATGGAGAAGCTTATGCGGGACTTCATATGGAATGGTGGGATTTCTAGATCGGTGGGGAATTTGGTGAAGTGGTCTTGGTCGG
CTTTGCCTCATACACAGGGGGGCCTTGGAATTGGTTCTTTGAGGCTAAATAACAATGCTCTATTAATGAAATGGTTATGGCAGTTCACAGTGGAAAGAGATAGCCTTTGG
AGACGGGTGATAGCCACTATTTACGTTGTGGAGTCTTTTGGATGGTGCACAAAACCATCGGATGGTTCTTCTATTGGAAGACCGTGGAGGGACATACAAGAGAACCTTAG
AGATTTTCAAAAGTTCTCCTTCTTCAAAGTATCCTCAGGTATGTCCATTGCGGATTGTTGGTGTGCAGAGGCCTCAACTTGGAATCTTCGTTTCAGAAGAAATCTCTTTG
AAAGGGAAATGAGTAGATGGGCAAACTTCACTGAAAAAATAGAAGGTGCAGCTATCGGAAATGGAAGGGACATTTTATGGTGGAAAGCAGACCCATCCGGACGTTTCACA
GTCAATTCAGCCTTCATGGCTCTCACGTCCCCGTCTCCTAAACTTAATTCAGCTACAGCAAACTTGATATGGAATTTTAAAGTCCCAAAGAAGTGTATGAGCAACAATGA
AACAGTGGACCACCTTTTTCTCCATTGCCCTTTTGTTTCCAAAGCTTGGGGGTTTATAGCTTCTTTGCTAGATTTATCTCTCTGCATACCTAGAAGAATTGAGGATTTCA
TAGCCGAAGGTTATGGAGGAAGGCAGCTCAAGGCCAAGGCTTGGGTTCTTTGGAATTGTGCGGCCCGGGCTCTTTCATGGTCGATATGGAAGGAACGAAATAGTCAACTT
TTTGAAGATAAGTTGATTTTGTTCGATTCTTTTTGTGTAAATACTAAGCATCTAGCTTCTTGGTGGGCTTTGCTATACAAGAAAGTTTTTTGTAACTACAATCTTCCTTT
GCTTAGACAAGATTGGAAAGTGGTGATTGTATAG
mRNA sequenceShow/hide mRNA sequence
ATGCACAAAAGACTCCAAAAATGGAGATCTTTGCTTCTTTCCAAGGGTGGTAGGCTTACTCTTGCTCAGTCGGTCCTCAATAGCATCCCCATATACTTCTTTTCAATTCT
CAAAGCTCCAGAGACCATCATAAAGTCTATGGAGAAGCTTATGCGGGACTTCATATGGAATGGTGGGATTTCTAGATCGGTGGGGAATTTGGTGAAGTGGTCTTGGTCGG
CTTTGCCTCATACACAGGGGGGCCTTGGAATTGGTTCTTTGAGGCTAAATAACAATGCTCTATTAATGAAATGGTTATGGCAGTTCACAGTGGAAAGAGATAGCCTTTGG
AGACGGGTGATAGCCACTATTTACGTTGTGGAGTCTTTTGGATGGTGCACAAAACCATCGGATGGTTCTTCTATTGGAAGACCGTGGAGGGACATACAAGAGAACCTTAG
AGATTTTCAAAAGTTCTCCTTCTTCAAAGTATCCTCAGGTATGTCCATTGCGGATTGTTGGTGTGCAGAGGCCTCAACTTGGAATCTTCGTTTCAGAAGAAATCTCTTTG
AAAGGGAAATGAGTAGATGGGCAAACTTCACTGAAAAAATAGAAGGTGCAGCTATCGGAAATGGAAGGGACATTTTATGGTGGAAAGCAGACCCATCCGGACGTTTCACA
GTCAATTCAGCCTTCATGGCTCTCACGTCCCCGTCTCCTAAACTTAATTCAGCTACAGCAAACTTGATATGGAATTTTAAAGTCCCAAAGAAGTGTATGAGCAACAATGA
AACAGTGGACCACCTTTTTCTCCATTGCCCTTTTGTTTCCAAAGCTTGGGGGTTTATAGCTTCTTTGCTAGATTTATCTCTCTGCATACCTAGAAGAATTGAGGATTTCA
TAGCCGAAGGTTATGGAGGAAGGCAGCTCAAGGCCAAGGCTTGGGTTCTTTGGAATTGTGCGGCCCGGGCTCTTTCATGGTCGATATGGAAGGAACGAAATAGTCAACTT
TTTGAAGATAAGTTGATTTTGTTCGATTCTTTTTGTGTAAATACTAAGCATCTAGCTTCTTGGTGGGCTTTGCTATACAAGAAAGTTTTTTGTAACTACAATCTTCCTTT
GCTTAGACAAGATTGGAAAGTGGTGATTGTATAG
Protein sequenceShow/hide protein sequence
MHKRLQKWRSLLLSKGGRLTLAQSVLNSIPIYFFSILKAPETIIKSMEKLMRDFIWNGGISRSVGNLVKWSWSALPHTQGGLGIGSLRLNNNALLMKWLWQFTVERDSLW
RRVIATIYVVESFGWCTKPSDGSSIGRPWRDIQENLRDFQKFSFFKVSSGMSIADCWCAEASTWNLRFRRNLFEREMSRWANFTEKIEGAAIGNGRDILWWKADPSGRFT
VNSAFMALTSPSPKLNSATANLIWNFKVPKKCMSNNETVDHLFLHCPFVSKAWGFIASLLDLSLCIPRRIEDFIAEGYGGRQLKAKAWVLWNCAARALSWSIWKERNSQL
FEDKLILFDSFCVNTKHLASWWALLYKKVFCNYNLPLLRQDWKVVIV