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Moc04g28330 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g28330
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr4:20952601..20953464
RNA-Seq ExpressionMoc04g28330
SyntenyMoc04g28330
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0140640 - catalytic activity, acting on a nucleic acid (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GFZ01910.1 hypothetical protein Acr_15g0005190 [Actinidia rufa]2.9e-1045.95Show/hide
Query:  MAPYHNARVMPRSFKLGNLVLKKVLAHVR-----ALEPNWSSPFKVRGVVQSGTHIITDLNDNKLPHLWNAQHL
        M  YH+ RV PR+F++G+LVLKKV    R      L PNW  P++VRG  + GT+ +T L++  LP+ W+A+HL
Subjt:  MAPYHNARVMPRSFKLGNLVLKKVLAHVR-----ALEPNWSSPFKVRGVVQSGTHIITDLNDNKLPHLWNAQHL

XP_022156049.1 uncharacterized protein LOC111023017 [Momordica charantia]2.4e-1252.17Show/hide
Query:  MAPYHNARVMPRSFKLGNLVLKKVLAHVRALEPNWSSPFKVRGVVQSGTHIITDLNDNKLPHLWNAQHL
        MA Y+N R   R+FK G+L LKKV+ HV ALEPNW  P++V  VV+   ++++DLN  +LPH WNA+ L
Subjt:  MAPYHNARVMPRSFKLGNLVLKKVLAHVRALEPNWSSPFKVRGVVQSGTHIITDLNDNKLPHLWNAQHL

XP_022156271.1 uncharacterized protein LOC111023203 [Momordica charantia]1.4e-1252.17Show/hide
Query:  MAPYHNARVMPRSFKLGNLVLKKVLAHVRALEPNWSSPFKVRGVVQSGTHIITDLNDNKLPHLWNAQHL
        MA Y+NARV  R FK G+LVLKKV+ HV AL+PNW  P++V  +++   ++   LN  +LPH WNA+HL
Subjt:  MAPYHNARVMPRSFKLGNLVLKKVLAHVRALEPNWSSPFKVRGVVQSGTHIITDLNDNKLPHLWNAQHL

XP_022156986.1 uncharacterized protein LOC111023816 [Momordica charantia]4.3e-1453.62Show/hide
Query:  MAPYHNARVMPRSFKLGNLVLKKVLAHVRALEPNWSSPFKVRGVVQSGTHIITDLNDNKLPHLWNAQHL
        MA Y+NARV  R+FK  +LVLKKV+ HV ALEPNW  P++V  +++   ++++DLN  +LPH WNA+HL
Subjt:  MAPYHNARVMPRSFKLGNLVLKKVLAHVRALEPNWSSPFKVRGVVQSGTHIITDLNDNKLPHLWNAQHL

XP_022159003.1 uncharacterized protein LOC111025448 [Momordica charantia]3.1e-1246.38Show/hide
Query:  MAPYHNARVMPRSFKLGNLVLKKVLAHVRALEPNWSSPFKVRGVVQSGTHIITDLNDNKLPHLWNAQHL
        MA ++N R+ PRSF++G+LV  K+ +HV  L+P+W   F+V+G+V+ GT+++ DL  + L H WNA+HL
Subjt:  MAPYHNARVMPRSFKLGNLVLKKVLAHVRALEPNWSSPFKVRGVVQSGTHIITDLNDNKLPHLWNAQHL

TrEMBL top hitse value%identityAlignment
A0A6J1DS38 uncharacterized protein LOC1110230171.2e-1252.17Show/hide
Query:  MAPYHNARVMPRSFKLGNLVLKKVLAHVRALEPNWSSPFKVRGVVQSGTHIITDLNDNKLPHLWNAQHL
        MA Y+N R   R+FK G+L LKKV+ HV ALEPNW  P++V  VV+   ++++DLN  +LPH WNA+ L
Subjt:  MAPYHNARVMPRSFKLGNLVLKKVLAHVRALEPNWSSPFKVRGVVQSGTHIITDLNDNKLPHLWNAQHL

A0A6J1DUF4 uncharacterized protein LOC1110232036.8e-1352.17Show/hide
Query:  MAPYHNARVMPRSFKLGNLVLKKVLAHVRALEPNWSSPFKVRGVVQSGTHIITDLNDNKLPHLWNAQHL
        MA Y+NARV  R FK G+LVLKKV+ HV AL+PNW  P++V  +++   ++   LN  +LPH WNA+HL
Subjt:  MAPYHNARVMPRSFKLGNLVLKKVLAHVRALEPNWSSPFKVRGVVQSGTHIITDLNDNKLPHLWNAQHL

A0A6J1DWM2 Ribonuclease H2.1e-1453.62Show/hide
Query:  MAPYHNARVMPRSFKLGNLVLKKVLAHVRALEPNWSSPFKVRGVVQSGTHIITDLNDNKLPHLWNAQHL
        MA Y+NARV  R+FK  +LVLKKV+ HV ALEPNW  P++V  +++   ++++DLN  +LPH WNA+HL
Subjt:  MAPYHNARVMPRSFKLGNLVLKKVLAHVRALEPNWSSPFKVRGVVQSGTHIITDLNDNKLPHLWNAQHL

A0A6J1DXL9 uncharacterized protein LOC1110254481.5e-1246.38Show/hide
Query:  MAPYHNARVMPRSFKLGNLVLKKVLAHVRALEPNWSSPFKVRGVVQSGTHIITDLNDNKLPHLWNAQHL
        MA ++N R+ PRSF++G+LV  K+ +HV  L+P+W   F+V+G+V+ GT+++ DL  + L H WNA+HL
Subjt:  MAPYHNARVMPRSFKLGNLVLKKVLAHVRALEPNWSSPFKVRGVVQSGTHIITDLNDNKLPHLWNAQHL

A0A7J0FUQ7 Ribonuclease H1.4e-1045.95Show/hide
Query:  MAPYHNARVMPRSFKLGNLVLKKVLAHVR-----ALEPNWSSPFKVRGVVQSGTHIITDLNDNKLPHLWNAQHL
        M  YH+ RV PR+F++G+LVLKKV    R      L PNW  P++VRG  + GT+ +T L++  LP+ W+A+HL
Subjt:  MAPYHNARVMPRSFKLGNLVLKKVLAHVR-----ALEPNWSSPFKVRGVVQSGTHIITDLNDNKLPHLWNAQHL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCCGTACCACAACGCTAGAGTCATGCCACGGTCGTTCAAGCTAGGGAACCTTGTCCTCAAAAAGGTTCTGGCCCATGTGAGGGCTCTGGAGCCAAACTGGTCAAG
CCCGTTCAAGGTTCGCGGGGTAGTTCAGTCCGGCACACACATCATCACCGACCTGAACGACAACAAACTACCTCACCTATGGAATGCTCAGCATCTATGTGCCAGCTTTC
TCACGGCATCAGTGGCGAATGCCTTCACCACCTCATTAAACTATGACATAACCTTTATTGTGTTTTCTAAGTCGGCGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCCGTACCACAACGCTAGAGTCATGCCACGGTCGTTCAAGCTAGGGAACCTTGTCCTCAAAAAGGTTCTGGCCCATGTGAGGGCTCTGGAGCCAAACTGGTCAAG
CCCGTTCAAGGTTCGCGGGGTAGTTCAGTCCGGCACACACATCATCACCGACCTGAACGACAACAAACTACCTCACCTATGGAATGCTCAGCATCTATGTGCCAGCTTTC
TCACGGCATCAGTGGCGAATGCCTTCACCACCTCATTAAACTATGACATAACCTTTATTGTGTTTTCTAAGTCGGCGTAA
Protein sequenceShow/hide protein sequence
MAPYHNARVMPRSFKLGNLVLKKVLAHVRALEPNWSSPFKVRGVVQSGTHIITDLNDNKLPHLWNAQHLCASFLTASVANAFTTSLNYDITFIVFSKSA