; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc04g28740 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g28740
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionReverse transcriptase
Genome locationchr4:21356201..21357116
RNA-Seq ExpressionMoc04g28740
SyntenyMoc04g28740
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022154947.1 uncharacterized protein LOC111022090 [Momordica charantia]1.5e-3385.39Show/hide
Query:  SLYSPIPETHRFGHDIAGLTPLESDVVPCNIGDDRVCDWNVPGLLNDNQDESDESYDPLGESEEKYYEAEFVNDDYDDALDEESEPDVE
        S   P P     GHDIAGLTPLESDVVPCN+GDDRVCDWNVPGL NDNQDESDESYDPLGESEE  YEAEFVNDDYDDALDEESEPDVE
Subjt:  SLYSPIPETHRFGHDIAGLTPLESDVVPCNIGDDRVCDWNVPGLLNDNQDESDESYDPLGESEEKYYEAEFVNDDYDDALDEESEPDVE
XP_022155970.1 uncharacterized protein LOC111022954 [Momordica charantia]1.6e-2784.42Show/hide
Query:  GHDIAGLTPLESDVVPCNIGDDRVCDWNVPGLLNDNQDESDESYDPLGESEEKYYEAEFVNDDYDDALDEESEPDVE
        GHDIAGLTPLESDVVPCN+GDDRVC WN+PGL NDNQDESDESYD LG+SEE  YEAEF+NDDYDDA DE+ EPDVE
Subjt:  GHDIAGLTPLESDVVPCNIGDDRVCDWNVPGLLNDNQDESDESYDPLGESEEKYYEAEFVNDDYDDALDEESEPDVE
XP_022156328.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111023249 [Momordica charantia]2.6e-1750Show/hide
Query:  PGRPKRVLELYAHSLYSPIPETHRFGHDIAGLT----PLESDVVPCNIGDDRVCDWNVPGLLNDNQDESDESYDPLGESEEKYYEAEFVNDDYDDALDEE
        PG  K   +L  H  +      H    +IA         + +VVPCN+GDDRVCDW+VPG+ NDN+DES ESYDPL ES+E + +AE+ N+++DDALD+E
Subjt:  PGRPKRVLELYAHSLYSPIPETHRFGHDIAGLT----PLESDVVPCNIGDDRVCDWNVPGLLNDNQDESDESYDPLGESEEKYYEAEFVNDDYDDALDEE

Query:  SEPDVE
         EPDVE
Subjt:  SEPDVE
XP_022157017.1 uncharacterized protein LOC111023843 [Momordica charantia]4.6e-2270.13Show/hide
Query:  GHDIAGLTPLESDVVPCNIGDDRVCDWNVPGLLNDNQDESDESYDPLGESEEKYYEAEFVNDDYDDALDEESEPDVE
        GHD+ GLTPL SDVVPCN+GDDRVCDW+VPG+ NDN+DES ESYDPL  SEE + +AE+ N+++DDALD+E E DVE
Subjt:  GHDIAGLTPLESDVVPCNIGDDRVCDWNVPGLLNDNQDESDESYDPLGESEEKYYEAEFVNDDYDDALDEESEPDVE
TrEMBL top hitse value%identityAlignment
A0A6J1DN26 uncharacterized protein LOC1110220907.3e-3485.39Show/hide
Query:  SLYSPIPETHRFGHDIAGLTPLESDVVPCNIGDDRVCDWNVPGLLNDNQDESDESYDPLGESEEKYYEAEFVNDDYDDALDEESEPDVE
        S   P P     GHDIAGLTPLESDVVPCN+GDDRVCDWNVPGL NDNQDESDESYDPLGESEE  YEAEFVNDDYDDALDEESEPDVE
Subjt:  SLYSPIPETHRFGHDIAGLTPLESDVVPCNIGDDRVCDWNVPGLLNDNQDESDESYDPLGESEEKYYEAEFVNDDYDDALDEESEPDVE
A0A6J1DP00 uncharacterized protein LOC1110229547.8e-2884.42Show/hide
Query:  GHDIAGLTPLESDVVPCNIGDDRVCDWNVPGLLNDNQDESDESYDPLGESEEKYYEAEFVNDDYDDALDEESEPDVE
        GHDIAGLTPLESDVVPCN+GDDRVC WN+PGL NDNQDESDESYD LG+SEE  YEAEF+NDDYDDA DE+ EPDVE
Subjt:  GHDIAGLTPLESDVVPCNIGDDRVCDWNVPGLLNDNQDESDESYDPLGESEEKYYEAEFVNDDYDDALDEESEPDVE
A0A6J1DQB9 Reverse transcriptase1.3e-1750Show/hide
Query:  PGRPKRVLELYAHSLYSPIPETHRFGHDIAGLT----PLESDVVPCNIGDDRVCDWNVPGLLNDNQDESDESYDPLGESEEKYYEAEFVNDDYDDALDEE
        PG  K   +L  H  +      H    +IA         + +VVPCN+GDDRVCDW+VPG+ NDN+DES ESYDPL ES+E + +AE+ N+++DDALD+E
Subjt:  PGRPKRVLELYAHSLYSPIPETHRFGHDIAGLT----PLESDVVPCNIGDDRVCDWNVPGLLNDNQDESDESYDPLGESEEKYYEAEFVNDDYDDALDEE

Query:  SEPDVE
         EPDVE
Subjt:  SEPDVE
A0A6J1DTG5 uncharacterized protein LOC1110238432.2e-2270.13Show/hide
Query:  GHDIAGLTPLESDVVPCNIGDDRVCDWNVPGLLNDNQDESDESYDPLGESEEKYYEAEFVNDDYDDALDEESEPDVE
        GHD+ GLTPL SDVVPCN+GDDRVCDW+VPG+ NDN+DES ESYDPL  SEE + +AE+ N+++DDALD+E E DVE
Subjt:  GHDIAGLTPLESDVVPCNIGDDRVCDWNVPGLLNDNQDESDESYDPLGESEEKYYEAEFVNDDYDDALDEESEPDVE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCAATCCCGGATCGAAAGATGGTTCGGGAGTGAACCGGGATACATCCCAGACCAATCGAAGCACTGTGGTCCGGGATATGTCTCGGACCAAGACTGGTCCGGGACG
GCCAAAACGTGTCCTCGAGTTGTATGCCCACAGCTTGTATTCCCCCATTCCAGAGACCCACAGATTCGGTCATGATATAGCAGGTTTGACACCATTGGAATCAGATGTTG
TTCCATGTAACATAGGAGATGACAGGGTATGTGATTGGAATGTGCCGGGATTATTGAATGATAATCAAGATGAAAGTGATGAATCATATGACCCGTTGGGAGAGTCAGAA
GAAAAATACTATGAAGCAGAATTTGTGAATGATGACTATGACGATGCACTTGATGAAGAGTCTGAGCCCGATGTGGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGTTCAATCCCGGATCGAAAGATGGTTCGGGAGTGAACCGGGATACATCCCAGACCAATCGAAGCACTGTGGTCCGGGATATGTCTCGGACCAAGACTGGTCCGGGACG
GCCAAAACGTGTCCTCGAGTTGTATGCCCACAGCTTGTATTCCCCCATTCCAGAGACCCACAGATTCGGTCATGATATAGCAGGTTTGACACCATTGGAATCAGATGTTG
TTCCATGTAACATAGGAGATGACAGGGTATGTGATTGGAATGTGCCGGGATTATTGAATGATAATCAAGATGAAAGTGATGAATCATATGACCCGTTGGGAGAGTCAGAA
GAAAAATACTATGAAGCAGAATTTGTGAATGATGACTATGACGATGCACTTGATGAAGAGTCTGAGCCCGATGTGGAATAG
Protein sequenceShow/hide protein sequence
MFNPGSKDGSGVNRDTSQTNRSTVVRDMSRTKTGPGRPKRVLELYAHSLYSPIPETHRFGHDIAGLTPLESDVVPCNIGDDRVCDWNVPGLLNDNQDESDESYDPLGESE
EKYYEAEFVNDDYDDALDEESEPDVE