; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc04g28830 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g28830
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptionribonuclease P protein subunit p38
Genome locationchr4:21413365..21416730
RNA-Seq ExpressionMoc04g28830
SyntenyMoc04g28830
Gene Ontology termsGO:0043232 - intracellular non-membrane-bounded organelle (cellular component)
InterPro domainsIPR004038 - Ribosomal protein L7Ae/L30e/S12e/Gadd45
IPR029064 - 50S ribosomal protein L30e-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6579150.1 hypothetical protein SDJN03_23598, partial [Cucurbita argyrosperma subsp. sororia]2.3e-7184.52Show/hide
Query:  MGKKAKSSANAQVVRSKLHQDCYEGQRLDELLQSIQREIKRARLLNAESLPAKIWLKKQFAVGVNEVTRVLERMTPSGDSARIMNPNYKACTVRLQAILL
        MGKKAKSS    VV+SK ++D YEG+RLDELLQSIQREIKRAR LNAESLP KIWLKKQFA+GVNEVTRVLERMTPS DSARI+NPNYKACTVRLQAILL
Subjt:  MGKKAKSSANAQVVRSKLHQDCYEGQRLDELLQSIQREIKRARLLNAESLPAKIWLKKQFAVGVNEVTRVLERMTPSGDSARIMNPNYKACTVRLQAILL

Query:  AGDCNPRWLTNHLPTLALSRNVPLLLMKDKEGSLRLGELVNLKTAIAIGIKANGSLINQLIGEILQGT
          DCNPRWLTNH+P+LA+SR VPL+L+KDKEGSLRLGELVNLKTAIAIGIKANGS +NQLIGEILQ T
Subjt:  AGDCNPRWLTNHLPTLALSRNVPLLLMKDKEGSLRLGELVNLKTAIAIGIKANGSLINQLIGEILQGT

XP_022146401.1 ribonuclease P protein subunit p38 [Momordica charantia]3.6e-88100Show/hide
Query:  MGKKAKSSANAQVVRSKLHQDCYEGQRLDELLQSIQREIKRARLLNAESLPAKIWLKKQFAVGVNEVTRVLERMTPSGDSARIMNPNYKACTVRLQAILL
        MGKKAKSSANAQVVRSKLHQDCYEGQRLDELLQSIQREIKRARLLNAESLPAKIWLKKQFAVGVNEVTRVLERMTPSGDSARIMNPNYKACTVRLQAILL
Subjt:  MGKKAKSSANAQVVRSKLHQDCYEGQRLDELLQSIQREIKRARLLNAESLPAKIWLKKQFAVGVNEVTRVLERMTPSGDSARIMNPNYKACTVRLQAILL

Query:  AGDCNPRWLTNHLPTLALSRNVPLLLMKDKEGSLRLGELVNLKTAIAIGIKANGSLINQLIGEILQGTVSLKV
        AGDCNPRWLTNHLPTLALSRNVPLLLMKDKEGSLRLGELVNLKTAIAIGIKANGSLINQLIGEILQGTVSLKV
Subjt:  AGDCNPRWLTNHLPTLALSRNVPLLLMKDKEGSLRLGELVNLKTAIAIGIKANGSLINQLIGEILQGTVSLKV

XP_022938626.1 ribonuclease P protein subunit p38 [Cucurbita moschata]2.7e-7285.12Show/hide
Query:  MGKKAKSSANAQVVRSKLHQDCYEGQRLDELLQSIQREIKRARLLNAESLPAKIWLKKQFAVGVNEVTRVLERMTPSGDSARIMNPNYKACTVRLQAILL
        MGKKAKSS    VV+SK ++D YEG+RLDELLQSIQREIKRAR LNAESLP KIWLKKQFA+GVNEVTRVLERMTPSGDSARI+NPNYKACTVRLQAILL
Subjt:  MGKKAKSSANAQVVRSKLHQDCYEGQRLDELLQSIQREIKRARLLNAESLPAKIWLKKQFAVGVNEVTRVLERMTPSGDSARIMNPNYKACTVRLQAILL

Query:  AGDCNPRWLTNHLPTLALSRNVPLLLMKDKEGSLRLGELVNLKTAIAIGIKANGSLINQLIGEILQGT
          DCNPRWLTNH+P+LA+SR VPL+L+KDKEGSLRLGELVNLKTAIAIGIKANGS +NQLIGEILQ T
Subjt:  AGDCNPRWLTNHLPTLALSRNVPLLLMKDKEGSLRLGELVNLKTAIAIGIKANGSLINQLIGEILQGT

XP_023549838.1 ribonuclease P protein subunit p38 [Cucurbita pepo subsp. pepo]4.0e-7184.52Show/hide
Query:  MGKKAKSSANAQVVRSKLHQDCYEGQRLDELLQSIQREIKRARLLNAESLPAKIWLKKQFAVGVNEVTRVLERMTPSGDSARIMNPNYKACTVRLQAILL
        MGKKAKSS    VV+SK ++D YEG+RLDELLQSIQREIKRAR LNAE+LP KIWLKKQFA+GVNEVTRVLERMTPS DSARI+NPNYKACTVRLQAILL
Subjt:  MGKKAKSSANAQVVRSKLHQDCYEGQRLDELLQSIQREIKRARLLNAESLPAKIWLKKQFAVGVNEVTRVLERMTPSGDSARIMNPNYKACTVRLQAILL

Query:  AGDCNPRWLTNHLPTLALSRNVPLLLMKDKEGSLRLGELVNLKTAIAIGIKANGSLINQLIGEILQGT
          DCNPRWLTNH+P+LA+SR VPL+L+KDKEGSLRLGELVNLKTAIAIGIKANGS INQLIGEILQ T
Subjt:  AGDCNPRWLTNHLPTLALSRNVPLLLMKDKEGSLRLGELVNLKTAIAIGIKANGSLINQLIGEILQGT

XP_038875290.1 ribonuclease P protein subunit p38 [Benincasa hispida]3.7e-6982.53Show/hide
Query:  MGKKAKSSANAQVVRSKLHQDCYEGQRLDELLQSIQREIKRARLLNAESLPAKIWLKKQFAVGVNEVTRVLERMTPSGDSARIMNPNYKACTVRLQAILL
        MGKKAKSSA   V++SK ++D YEG+RLDE LQSIQREIK AR LNAESLP KIWLKKQFA+GVNEVTRVLERMTPSGDSARIMNPNYKACTV+LQA+LL
Subjt:  MGKKAKSSANAQVVRSKLHQDCYEGQRLDELLQSIQREIKRARLLNAESLPAKIWLKKQFAVGVNEVTRVLERMTPSGDSARIMNPNYKACTVRLQAILL

Query:  AGDCNPRWLTNHLPTLALSRNVPLLLMKDKEGSLRLGELVNLKTAIAIGIKANGSLINQLIGEILQ
          +CNPRWLTNH+P+LA+SR VPL+L+KDKEGSLRLGELVNLKTAIAIGIKANGS +NQLI EILQ
Subjt:  AGDCNPRWLTNHLPTLALSRNVPLLLMKDKEGSLRLGELVNLKTAIAIGIKANGSLINQLIGEILQ

TrEMBL top hitse value%identityAlignment
A0A1S3CQV2 ribonuclease P protein subunit p38 isoform X51.6e-6276.47Show/hide
Query:  MGKKAKSSAN-AQVVRSKLHQD-CYEGQRLDELLQSIQREIKRARLLNAESLPAKIWLKKQFAVGVNEVTRVLERMTPSGDSARIMNPNYKACTVRLQAI
        MGK  KSSA+    ++SK ++D  YEG+RLDELL SIQREIK AR LNAESLP K WLKKQFA+GVNEVTR LERMTP GDSAR+MNPNYKAC V+LQAI
Subjt:  MGKKAKSSAN-AQVVRSKLHQD-CYEGQRLDELLQSIQREIKRARLLNAESLPAKIWLKKQFAVGVNEVTRVLERMTPSGDSARIMNPNYKACTVRLQAI

Query:  LLAGDCNPRWLTNHLPTLALSRNVPLLLMKDKEGSLRLGELVNLKTAIAIGIKANGSLINQLIGEILQGT
        LL  +CNPRWLTNH+P LA+SR VPL+L+KDKEGSLRLGELVNLKTAIAIGIK+NGS +NQLI EILQ T
Subjt:  LLAGDCNPRWLTNHLPTLALSRNVPLLLMKDKEGSLRLGELVNLKTAIAIGIKANGSLINQLIGEILQGT

A0A1S3CR39 ribonuclease P protein subunit p38 isoform X66.6e-6476.92Show/hide
Query:  MGKKAKSSAN-AQVVRSKLHQDCYEGQRLDELLQSIQREIKRARLLNAESLPAKIWLKKQFAVGVNEVTRVLERMTPSGDSARIMNPNYKACTVRLQAIL
        MGK  KSSA+    ++SK ++D YEG+RLDELL SIQREIK AR LNAESLP K WLKKQFA+GVNEVTR LERMTP GDSAR+MNPNYKAC V+LQAIL
Subjt:  MGKKAKSSAN-AQVVRSKLHQDCYEGQRLDELLQSIQREIKRARLLNAESLPAKIWLKKQFAVGVNEVTRVLERMTPSGDSARIMNPNYKACTVRLQAIL

Query:  LAGDCNPRWLTNHLPTLALSRNVPLLLMKDKEGSLRLGELVNLKTAIAIGIKANGSLINQLIGEILQGT
        L  +CNPRWLTNH+P LA+SR VPL+L+KDKEGSLRLGELVNLKTAIAIGIK+NGS +NQLI EILQ T
Subjt:  LAGDCNPRWLTNHLPTLALSRNVPLLLMKDKEGSLRLGELVNLKTAIAIGIKANGSLINQLIGEILQGT

A0A6J1CZ90 ribonuclease P protein subunit p381.7e-88100Show/hide
Query:  MGKKAKSSANAQVVRSKLHQDCYEGQRLDELLQSIQREIKRARLLNAESLPAKIWLKKQFAVGVNEVTRVLERMTPSGDSARIMNPNYKACTVRLQAILL
        MGKKAKSSANAQVVRSKLHQDCYEGQRLDELLQSIQREIKRARLLNAESLPAKIWLKKQFAVGVNEVTRVLERMTPSGDSARIMNPNYKACTVRLQAILL
Subjt:  MGKKAKSSANAQVVRSKLHQDCYEGQRLDELLQSIQREIKRARLLNAESLPAKIWLKKQFAVGVNEVTRVLERMTPSGDSARIMNPNYKACTVRLQAILL

Query:  AGDCNPRWLTNHLPTLALSRNVPLLLMKDKEGSLRLGELVNLKTAIAIGIKANGSLINQLIGEILQGTVSLKV
        AGDCNPRWLTNHLPTLALSRNVPLLLMKDKEGSLRLGELVNLKTAIAIGIKANGSLINQLIGEILQGTVSLKV
Subjt:  AGDCNPRWLTNHLPTLALSRNVPLLLMKDKEGSLRLGELVNLKTAIAIGIKANGSLINQLIGEILQGTVSLKV

A0A6J1FDN9 ribonuclease P protein subunit p381.3e-7285.12Show/hide
Query:  MGKKAKSSANAQVVRSKLHQDCYEGQRLDELLQSIQREIKRARLLNAESLPAKIWLKKQFAVGVNEVTRVLERMTPSGDSARIMNPNYKACTVRLQAILL
        MGKKAKSS    VV+SK ++D YEG+RLDELLQSIQREIKRAR LNAESLP KIWLKKQFA+GVNEVTRVLERMTPSGDSARI+NPNYKACTVRLQAILL
Subjt:  MGKKAKSSANAQVVRSKLHQDCYEGQRLDELLQSIQREIKRARLLNAESLPAKIWLKKQFAVGVNEVTRVLERMTPSGDSARIMNPNYKACTVRLQAILL

Query:  AGDCNPRWLTNHLPTLALSRNVPLLLMKDKEGSLRLGELVNLKTAIAIGIKANGSLINQLIGEILQGT
          DCNPRWLTNH+P+LA+SR VPL+L+KDKEGSLRLGELVNLKTAIAIGIKANGS +NQLIGEILQ T
Subjt:  AGDCNPRWLTNHLPTLALSRNVPLLLMKDKEGSLRLGELVNLKTAIAIGIKANGSLINQLIGEILQGT

A0A6J1K3C5 ribonuclease P protein subunit p388.9e-6982.74Show/hide
Query:  MGKKAKSSANAQVVRSKLHQDCYEGQRLDELLQSIQREIKRARLLNAESLPAKIWLKKQFAVGVNEVTRVLERMTPSGDSARIMNPNYKACTVRLQAILL
        MGKKAKSS    VV+SK ++D YEG+RLDELLQSIQREIKRAR LNA+SLP KIWLKKQFA+GVNEVTRVLERMTPS DSAR MNPNYKACTVRLQAILL
Subjt:  MGKKAKSSANAQVVRSKLHQDCYEGQRLDELLQSIQREIKRARLLNAESLPAKIWLKKQFAVGVNEVTRVLERMTPSGDSARIMNPNYKACTVRLQAILL

Query:  AGDCNPRWLTNHLPTLALSRNVPLLLMKDKEGSLRLGELVNLKTAIAIGIKANGSLINQLIGEILQGT
          DCNPRWLTNH+P+LA+SR VPL+L+KDKEGSLRLGELVNLKTAIAIGIK NGS +NQLIGEIL  T
Subjt:  AGDCNPRWLTNHLPTLALSRNVPLLLMKDKEGSLRLGELVNLKTAIAIGIKANGSLINQLIGEILQGT

SwissProt top hitse value%identityAlignment
P78345 Ribonuclease P protein subunit p381.9e-0430.51Show/hide
Query:  LKKQFAVGVNEVTRVLERMTPSGDSARIMNPNYKACTVRLQAILLAGDCNPRWLTNHLPTLALSRNVPLLLMKDKEGSLRLGELVNLKTAIAIGIKANGS
        ++KQ A+GVNEVTR LER                     L  +L+     P  +T+HL  L+LSR+VP   +     S R+  ++ LK  +A+  K N +
Subjt:  LKKQFAVGVNEVTRVLERMTPSGDSARIMNPNYKACTVRLQAILLAGDCNPRWLTNHLPTLALSRNVPLLLMKDKEGSLRLGELVNLKTAIAIGIKANGS

Query:  LINQLIGEILQGTVSLKV
             +  I+    SL V
Subjt:  LINQLIGEILQGTVSLKV

Q32LC1 Ribonuclease P protein subunit p384.3e-0430.51Show/hide
Query:  LKKQFAVGVNEVTRVLERMTPSGDSARIMNPNYKACTVRLQAILLAGDCNPRWLTNHLPTLALSRNVPLLLMKDKEGSLRLGELVNLKTAIAIGIKANGS
        ++KQ A+G+NEVTR LER                     L   L      P  +T+HL  L++SR VP   +     S RL  ++ LK  +A+G K N +
Subjt:  LKKQFAVGVNEVTRVLERMTPSGDSARIMNPNYKACTVRLQAILLAGDCNPRWLTNHLPTLALSRNVPLLLMKDKEGSLRLGELVNLKTAIAIGIKANGS

Query:  LINQLIGEILQGTVSLKV
           + +  IL     L V
Subjt:  LINQLIGEILQGTVSLKV

Q80UU2 Ribonuclease P protein subunit p387.4e-0429.17Show/hide
Query:  IWLKKQFAVGVNEVTRVLERMTPSGDSARIMNPNYKACTVRLQAILLAGDCNPRWLTNHLPTLALSRNVPLLLMKDKEGSLRLGELVNLKTAIAIGIKAN
        + ++KQ  +GVNEVTR LER                     L  +L+     P  +T+HL  L+LSR VP   +   + S R+  ++ LK  +A+G + N
Subjt:  IWLKKQFAVGVNEVTRVLERMTPSGDSARIMNPNYKACTVRLQAILLAGDCNPRWLTNHLPTLALSRNVPLLLMKDKEGSLRLGELVNLKTAIAIGIKAN

Query:  GSLINQLIGEILQGTVSLKV
               +  I+    SL V
Subjt:  GSLINQLIGEILQGTVSLKV

Arabidopsis top hitse value%identityAlignment
AT4G01790.1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein7.3e-3957.53Show/hide
Query:  DCYEGQRLDELLQSIQREIKRARLLNAESLPAKIWLKKQFAVGVNEVTRVLERMTPSGDSARIMNPNYKACTVRLQAILLAGDCNPRWLTNHLPTLALSR
        D YEG+RL  LL  IQR I+ ++L N  SLP KIWLKKQ A+G+NEVTRVLERM P+  S +  NP       +LQ ++L  DC PR LT H+P LA SR
Subjt:  DCYEGQRLDELLQSIQREIKRARLLNAESLPAKIWLKKQFAVGVNEVTRVLERMTPSGDSARIMNPNYKACTVRLQAILLAGDCNPRWLTNHLPTLALSR

Query:  NVPLLLMKD-KEGSLRLGELVNLKTAIAIGIKANGSLINQLIGEIL
        NVP+L ++D K  SLRLGELV LKTA+AIGIKA G+ +N L+ +IL
Subjt:  NVPLLLMKD-KEGSLRLGELVNLKTAIAIGIKANGSLINQLIGEIL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAAGAAGGCGAAATCTTCTGCTAACGCTCAAGTCGTACGATCCAAGCTTCACCAAGATTGCTATGAAGGCCAACGTCTCGATGAGTTGCTACAGTCGATT
CAGAGGGAGATAAAGAGAGCAAGACTTCTGAATGCGGAATCCTTGCCGGCAAAAATTTGGCTTAAGAAACAATTTGCAGTTGGAGTTAATGAGGTTACTAGAGTT
CTTGAACGGATGACGCCAAGTGGAGATTCTGCTCGCATAATGAACCCTAATTATAAGGCGTGTACAGTCAGGCTTCAGGCTATACTGTTAGCAGGTGATTGCAAC
CCTCGATGGCTGACAAACCATCTCCCAACCTTGGCCTTGTCTAGGAACGTACCGTTGCTACTCATGAAAGATAAAGAAGGATCTTTAAGGTTAGGTGAACTTGTT
AACCTTAAAACAGCAATTGCAATTGGAATAAAGGCGAATGGGAGCCTTATTAATCAATTGATTGGTGAAATTCTTCAAGGAACAGTATCACTAAAAGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAAAGAAGGCGAAATCTTCTGCTAACGCTCAAGTCGTACGATCCAAGCTTCACCAAGATTGCTATGAAGGCCAACGTCTCGATGAGTTGCTACAGTCGATT
CAGAGGGAGATAAAGAGAGCAAGACTTCTGAATGCGGAATCCTTGCCGGCAAAAATTTGGCTTAAGAAACAATTTGCAGTTGGAGTTAATGAGGTTACTAGAGTT
CTTGAACGGATGACGCCAAGTGGAGATTCTGCTCGCATAATGAACCCTAATTATAAGGCGTGTACAGTCAGGCTTCAGGCTATACTGTTAGCAGGTGATTGCAAC
CCTCGATGGCTGACAAACCATCTCCCAACCTTGGCCTTGTCTAGGAACGTACCGTTGCTACTCATGAAAGATAAAGAAGGATCTTTAAGGTTAGGTGAACTTGTT
AACCTTAAAACAGCAATTGCAATTGGAATAAAGGCGAATGGGAGCCTTATTAATCAATTGATTGGTGAAATTCTTCAAGGAACAGTATCACTAAAAGTTTGA
Protein sequenceShow/hide protein sequence
MGKKAKSSANAQVVRSKLHQDCYEGQRLDELLQSIQREIKRARLLNAESLPAKIWLKKQFAVGVNEVTRVLERMTPSGDSARIMNPNYKACTVRLQAILLAGDCN
PRWLTNHLPTLALSRNVPLLLMKDKEGSLRLGELVNLKTAIAIGIKANGSLINQLIGEILQGTVSLKV