; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc04g29170 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g29170
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptionubiquitin carboxyl-terminal hydrolase 12-like
Genome locationchr4:21645812..21650355
RNA-Seq ExpressionMoc04g29170
SyntenyMoc04g29170
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002083 - MATH/TRAF domain
IPR008974 - TRAF-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022146379.1 ubiquitin carboxyl-terminal hydrolase 12-like [Momordica charantia]2.6e-3946.73Show/hide
Query:  VLRSTRNEKPLHYSLQIQSFSLLKTSLATSNRDRYESQFFNAGGYKWKLAVYPNGDVKRNGAGSYIPLF-------------------------------
        V+RSTR+EKPLHY+LQIQSFSLLKT+L  S+ DRYES+ FNAGGYKWKLA+YP GDVKRNG+  +I L+                               
Subjt:  VLRSTRNEKPLHYSLQIQSFSLLKTSLATSNRDRYESQFFNAGGYKWKLAVYPNGDVKRNGAGSYIPLF-------------------------------

Query:  --DGKVRRFHAIKKERGFLFWHHITGLVQSAIPCQVDLFITENLSIPLSNQKSVLWSNAISAILWHTWKIWLYPKGCSLASAGFLSLYLIFDSFKEHPQG
          DG VRRFHAIK E GF     +     S+    VD      + +             +  +  + WK+WLYPKGCS A  GFLSLYLI DS KE  QG
Subjt:  --DGKVRRFHAIKKERGFLFWHHITGLVQSAIPCQVDLFITENLSIPLSNQKSVLWSNAISAILWHTWKIWLYPKGCSLASAGFLSLYLIFDSFKEHPQG

Query:  SRVYAEFEIAVLSK
        S+VY E+E+A+LS+
Subjt:  SRVYAEFEIAVLSK

XP_022146380.1 probable inactive serine/threonine-protein kinase fnkC [Momordica charantia]9.0e-4049.53Show/hide
Query:  VLRSTRNEKPLHYSLQIQSFSLLKTSLATSNRDRYESQFFNAGGYKWKLAVYPNGDVKRNGA---GSYI--------PLFDGKVRRFHAIKKERGF----
        V+RSTR+EKPLHY+LQIQSFSLLK +LA+SNRDRYESQ FNAGGYKWKLAVYPNGDVKRNGA     Y+        P   GKVRRFHA+K E GF    
Subjt:  VLRSTRNEKPLHYSLQIQSFSLLKTSLATSNRDRYESQFFNAGGYKWKLAVYPNGDVKRNGA---GSYI--------PLFDGKVRRFHAIKKERGF----

Query:  ---LFWHHITGLVQS----------AIPC----QVDLFITENLSIP-------LSNQKSVLWSNAISAILWHTWKIWLYPKGCSLASAGFLSLYLIFDSF
            F     G V             + C    +V  FI E  S          S      + +    +  + WK+WLYPKG S A  GFLSLYL ++S+
Subjt:  ---LFWHHITGLVQS----------AIPC----QVDLFITENLSIP-------LSNQKSVLWSNAISAILWHTWKIWLYPKGCSLASAGFLSLYLIFDSF

Query:  KEHPQGSRVYAEFE
        +E PQGS+VY E+E
Subjt:  KEHPQGSRVYAEFE

XP_022146382.1 uncharacterized protein LOC111015610 [Momordica charantia]4.5e-3945.53Show/hide
Query:  EKNNIISNEDVA----VLRSTRNEKPLHYSLQIQSFSLLKTSLATSNRDRYESQFFNAGGYKWKLAVYPNGDVKRNGAG---------------------
        ++N+IIS    A    VLRS R+EKPLHY+LQIQ FSLLKT+LATS+RDRYES  F+  G+KWKLAVYP+GDVKRNG+                      
Subjt:  EKNNIISNEDVA----VLRSTRNEKPLHYSLQIQSFSLLKTSLATSNRDRYESQFFNAGGYKWKLAVYPNGDVKRNGAG---------------------

Query:  -----------SYIPLFDGKVRRFHAIKKERGF-------LFWHHITG-LVQSAIPCQVDLFIT------ENLSI---PLSNQKSVLWSNAISAILWHTW
                   +Y+ + DGKVRRFHA+KKE GF        F     G LV       VD+F+       E LS+   P +N+ +  W     + L    
Subjt:  -----------SYIPLFDGKVRRFHAIKKERGF-------LFWHHITG-LVQSAIPCQVDLFIT------ENLSI---PLSNQKSVLWSNAISAILWHTW

Query:  KIWLYPKGCSLASAGFLSLYLIFDSFKEHPQGSRVYAEFEIAVLSKY-----DSGVG
        K+ LYPKG   AS  +LSL+L  +S KE PQG RVYAEFEIAVLSKY     D G+G
Subjt:  KIWLYPKGCSLASAGFLSLYLIFDSFKEHPQGSRVYAEFEIAVLSKY-----DSGVG

XP_022146383.1 uncharacterized protein LOC111015611 [Momordica charantia]2.1e-4448.59Show/hide
Query:  DLGDEKNNIISNEDVAVLRSTRNEKPLHYSLQIQSFSLLKTSLATSNRDRYESQFFNAGGYKWKLAVYPNGDVKRNGAG---------------------
        DL D  +  I N+   +LRS R+EKPLHY+LQIQ FSLLKT+LAT +R+RYES  FN GG+KWKLA+YPNGD  RNG+G                     
Subjt:  DLGDEKNNIISNEDVAVLRSTRNEKPLHYSLQIQSFSLLKTSLATSNRDRYESQFFNAGGYKWKLAVYPNGDVKRNGAG---------------------

Query:  -------------SYIPLFDGKVRRFHAIKKERGF-------LFWHHITG-LVQSAIPCQVDLFITENLSIPLSNQKSVLWSNAISAILWHTWKIWLYPK
                     +Y+ + DGKVRRFHA+K E GF        F     G LV       VD+F+ +  S                    + WKI L+PK
Subjt:  -------------SYIPLFDGKVRRFHAIKKERGF-------LFWHHITG-LVQSAIPCQVDLFITENLSIPLSNQKSVLWSNAISAILWHTWKIWLYPK

Query:  GCSLASAGFLSLYLIFDSFKE-HPQGSRVYAEFEIAVLSKYDSGVGHKK
        GCS  SAGFLSLYLIFDSFKE  PQG RVYAEFEIAVLSKY  GVGHKK
Subjt:  GCSLASAGFLSLYLIFDSFKE-HPQGSRVYAEFEIAVLSKYDSGVGHKK

XP_038874970.1 uncharacterized protein LOC120067490 [Benincasa hispida]1.0e-3541.95Show/hide
Query:  KRKQADLGDEKNNIISNEDVA-VLRSTRNEKPLHYSLQIQSFSLLKTSLATSN-RDRYESQFFNAGGYKWKLAVYPNGDVKRNGAG--------------
        ++ +A++G+ KN+I +NE+ + V+R++R+EKPLHY+L+IQSFSLLK ++A S+ R+RYESQ F AGGYKWKLA+YPNGD KRN A               
Subjt:  KRKQADLGDEKNNIISNEDVA-VLRSTRNEKPLHYSLQIQSFSLLKTSLATSN-RDRYESQFFNAGGYKWKLAVYPNGDVKRNGAG--------------

Query:  --------------------SYIPLFDGKVRRFHAIKKERGF-------LFWHHITG-LVQSAIPCQVDLFI-------TENLSI--PLSNQKSVLWSNA
                             Y  + DGKVR FHAIKKE GF        F     G LV       VD+ +        E LS+   L N K     N 
Subjt:  --------------------SYIPLFDGKVRRFHAIKKERGF-------LFWHHITG-LVQSAIPCQVDLFI-------TENLSI--PLSNQKSVLWSNA

Query:  ISAILW------------HTWKIWLYPKGCSLASAGFLSLYLIFDSFKEHPQGSRVYAEFEIAVLSK
         S +              +TWKI LYP+G SLA  G++S++L FDSF++ PQGSRVY E++IAVLS+
Subjt:  ISAILW------------HTWKIWLYPKGCSLASAGFLSLYLIFDSFKEHPQGSRVYAEFEIAVLSK

TrEMBL top hitse value%identityAlignment
A0A6J1CX47 probable inactive serine/threonine-protein kinase fnkC4.4e-4049.53Show/hide
Query:  VLRSTRNEKPLHYSLQIQSFSLLKTSLATSNRDRYESQFFNAGGYKWKLAVYPNGDVKRNGA---GSYI--------PLFDGKVRRFHAIKKERGF----
        V+RSTR+EKPLHY+LQIQSFSLLK +LA+SNRDRYESQ FNAGGYKWKLAVYPNGDVKRNGA     Y+        P   GKVRRFHA+K E GF    
Subjt:  VLRSTRNEKPLHYSLQIQSFSLLKTSLATSNRDRYESQFFNAGGYKWKLAVYPNGDVKRNGA---GSYI--------PLFDGKVRRFHAIKKERGF----

Query:  ---LFWHHITGLVQS----------AIPC----QVDLFITENLSIP-------LSNQKSVLWSNAISAILWHTWKIWLYPKGCSLASAGFLSLYLIFDSF
            F     G V             + C    +V  FI E  S          S      + +    +  + WK+WLYPKG S A  GFLSLYL ++S+
Subjt:  ---LFWHHITGLVQS----------AIPC----QVDLFITENLSIP-------LSNQKSVLWSNAISAILWHTWKIWLYPKGCSLASAGFLSLYLIFDSF

Query:  KEHPQGSRVYAEFE
        +E PQGS+VY E+E
Subjt:  KEHPQGSRVYAEFE

A0A6J1CXZ0 ubiquitin carboxyl-terminal hydrolase 12-like1.3e-3946.73Show/hide
Query:  VLRSTRNEKPLHYSLQIQSFSLLKTSLATSNRDRYESQFFNAGGYKWKLAVYPNGDVKRNGAGSYIPLF-------------------------------
        V+RSTR+EKPLHY+LQIQSFSLLKT+L  S+ DRYES+ FNAGGYKWKLA+YP GDVKRNG+  +I L+                               
Subjt:  VLRSTRNEKPLHYSLQIQSFSLLKTSLATSNRDRYESQFFNAGGYKWKLAVYPNGDVKRNGAGSYIPLF-------------------------------

Query:  --DGKVRRFHAIKKERGFLFWHHITGLVQSAIPCQVDLFITENLSIPLSNQKSVLWSNAISAILWHTWKIWLYPKGCSLASAGFLSLYLIFDSFKEHPQG
          DG VRRFHAIK E GF     +     S+    VD      + +             +  +  + WK+WLYPKGCS A  GFLSLYLI DS KE  QG
Subjt:  --DGKVRRFHAIKKERGFLFWHHITGLVQSAIPCQVDLFITENLSIPLSNQKSVLWSNAISAILWHTWKIWLYPKGCSLASAGFLSLYLIFDSFKEHPQG

Query:  SRVYAEFEIAVLSK
        S+VY E+E+A+LS+
Subjt:  SRVYAEFEIAVLSK

A0A6J1CYF6 uncharacterized protein LOC1110156111.0e-4448.59Show/hide
Query:  DLGDEKNNIISNEDVAVLRSTRNEKPLHYSLQIQSFSLLKTSLATSNRDRYESQFFNAGGYKWKLAVYPNGDVKRNGAG---------------------
        DL D  +  I N+   +LRS R+EKPLHY+LQIQ FSLLKT+LAT +R+RYES  FN GG+KWKLA+YPNGD  RNG+G                     
Subjt:  DLGDEKNNIISNEDVAVLRSTRNEKPLHYSLQIQSFSLLKTSLATSNRDRYESQFFNAGGYKWKLAVYPNGDVKRNGAG---------------------

Query:  -------------SYIPLFDGKVRRFHAIKKERGF-------LFWHHITG-LVQSAIPCQVDLFITENLSIPLSNQKSVLWSNAISAILWHTWKIWLYPK
                     +Y+ + DGKVRRFHA+K E GF        F     G LV       VD+F+ +  S                    + WKI L+PK
Subjt:  -------------SYIPLFDGKVRRFHAIKKERGF-------LFWHHITG-LVQSAIPCQVDLFITENLSIPLSNQKSVLWSNAISAILWHTWKIWLYPK

Query:  GCSLASAGFLSLYLIFDSFKE-HPQGSRVYAEFEIAVLSKYDSGVGHKK
        GCS  SAGFLSLYLIFDSFKE  PQG RVYAEFEIAVLSKY  GVGHKK
Subjt:  GCSLASAGFLSLYLIFDSFKE-HPQGSRVYAEFEIAVLSKYDSGVGHKK

A0A6J1CZ69 ubiquitin carboxyl-terminal hydrolase 13-like3.8e-2840.96Show/hide
Query:  EKNNIISNEDVA---VLRSTRNEKPLHYSLQIQSFSLLKTSLATSNRDRYESQFFNAGGYKWKLAVYPNGDVKRNGA-----------------------
        ++NN IS    A   VL  TR+EKPLHY+LQIQSFSLLKT+LA SN DRYESQ FNAGGYKWKLAVYPNGDVKRNG+                       
Subjt:  EKNNIISNEDVA---VLRSTRNEKPLHYSLQIQSFSLLKTSLATSNRDRYESQFFNAGGYKWKLAVYPNGDVKRNGA-----------------------

Query:  ---------GSYIPLFDGKVRRFHAIKKERGF-------LFWHHITG-LVQSAIPCQVDLFITENLSIPLSNQKSVLWSNAISAILWHTWKIWLYPKGCS
                   Y+ + D KVRRFH+I+ E  F        F     G LV       VD+ + +          S +     +   W T       K   
Subjt:  ---------GSYIPLFDGKVRRFHAIKKERGF-------LFWHHITG-LVQSAIPCQVDLFITENLSIPLSNQKSVLWSNAISAILWHTWKIWLYPKGCS

Query:  LASAGFLSLYLIFDSFKEHPQGSRVYAEFEIAVLSKY-----DSGVGHK
         +    +  Y     FKE PQGS+VY EFEIAVLSKY     D G+G +
Subjt:  LASAGFLSLYLIFDSFKEHPQGSRVYAEFEIAVLSKY-----DSGVGHK

A0A6J1CZF7 uncharacterized protein LOC1110156102.2e-3945.53Show/hide
Query:  EKNNIISNEDVA----VLRSTRNEKPLHYSLQIQSFSLLKTSLATSNRDRYESQFFNAGGYKWKLAVYPNGDVKRNGAG---------------------
        ++N+IIS    A    VLRS R+EKPLHY+LQIQ FSLLKT+LATS+RDRYES  F+  G+KWKLAVYP+GDVKRNG+                      
Subjt:  EKNNIISNEDVA----VLRSTRNEKPLHYSLQIQSFSLLKTSLATSNRDRYESQFFNAGGYKWKLAVYPNGDVKRNGAG---------------------

Query:  -----------SYIPLFDGKVRRFHAIKKERGF-------LFWHHITG-LVQSAIPCQVDLFIT------ENLSI---PLSNQKSVLWSNAISAILWHTW
                   +Y+ + DGKVRRFHA+KKE GF        F     G LV       VD+F+       E LS+   P +N+ +  W     + L    
Subjt:  -----------SYIPLFDGKVRRFHAIKKERGF-------LFWHHITG-LVQSAIPCQVDLFIT------ENLSI---PLSNQKSVLWSNAISAILWHTW

Query:  KIWLYPKGCSLASAGFLSLYLIFDSFKEHPQGSRVYAEFEIAVLSKY-----DSGVG
        K+ LYPKG   AS  +LSL+L  +S KE PQG RVYAEFEIAVLSKY     D G+G
Subjt:  KIWLYPKGCSLASAGFLSLYLIFDSFKEHPQGSRVYAEFEIAVLSKY-----DSGVG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G15710.1 TRAF-like family protein1.8e-0637.88Show/hide
Query:  DVAVLRSTRNEKPLHYSLQIQSFSLLKTSLATSNRDRYESQFFNAGGYKWKLAVYPNGDVKRNGAG
        D  ++ + R   P  YSL+I   S L         D+YES  F +GGY W+L +YP G+ K  G+G
Subjt:  DVAVLRSTRNEKPLHYSLQIQSFSLLKTSLATSNRDRYESQFFNAGGYKWKLAVYPNGDVKRNGAG

AT3G17380.1 TRAF-like family protein2.4e-1425Show/hide
Query:  VLRSTRNEKPLHYSLQIQSFSLLKTSLATSNRDRYESQFFNAGGYKWKLAVYPNGDVKRN---GAGSYIPLFD---------------------------
        +++S  +  P HY ++I+SFSLL         +RYE++ F AGGYKWKL +YPNG+  +N       Y+ L D                           
Subjt:  VLRSTRNEKPLHYSLQIQSFSLLKTSLATSNRDRYESQFFNAGGYKWKLAVYPNGDVKRN---GAGSYIPLFD---------------------------

Query:  ---GKVRRFHAIKKERGF-------LFWHHITG-LVQSAIPCQVDLFITENLSIPLSNQKSVLWSNAISAILW----------------------HTWKI
           G  RRFH++K+E GF        F     G L++       D+F+++          S++     S  +W                        WKI
Subjt:  ---GKVRRFHAIKKERGF-------LFWHHITG-LVQSAIPCQVDLFITENLSIPLSNQKSVLWSNAISAILW----------------------HTWKI

Query:  WLYPKGCSLASAGFLSLYLIFDSFKEHPQGSRVYAEFEIAVLSK
          YP G    +   LS+YL     +    G++++ EF I +  +
Subjt:  WLYPKGCSLASAGFLSLYLIFDSFKEHPQGSRVYAEFEIAVLSK

AT3G20370.1 TRAF-like family protein4.4e-0837.21Show/hide
Query:  EKNNIISNEDVAV-----LRSTRNEKPLHYSLQIQSFSLLKTSLATSNRDRYESQFFNAGGYKWKLAVYPNGDVKRNGAGSYIPLF
        ++N  IS+ D  V     ++  R+  P  YSL+++SF+ L  S  T   ++Y S+ F+ GGY W L V+PNG+ K +G+G Y+ L+
Subjt:  EKNNIISNEDVAV-----LRSTRNEKPLHYSLQIQSFSLLKTSLATSNRDRYESQFFNAGGYKWKLAVYPNGDVKRNGAGSYIPLF

AT3G28220.1 TRAF-like family protein8.2e-0740Show/hide
Query:  PLHYSLQIQSFSLLKTSLATSNRDRYESQFFNAGGYKWKLAVYPNGDVKRNGAGSYIPLF
        P  Y L+I+SF    TS    N ++YES+ F +GGY W L VYP G++K     +Y+ ++
Subjt:  PLHYSLQIQSFSLLKTSLATSNRDRYESQFFNAGGYKWKLAVYPNGDVKRNGAGSYIPLF

AT5G26280.1 TRAF-like family protein8.2e-0738.1Show/hide
Query:  GDEKNNIIS-NEDVAVLRSTRNEKPLHYSLQIQSFSLLKTSLATSNRDRYESQFFNAGGYKWKLAVYPNGDVKRNGAGSYIPLF
        G E N+  S  E++ V R  R E+P    + I SFS++K        + YES  F A GYKW+L +Y NG+ K +G   +I L+
Subjt:  GDEKNNIIS-NEDVAVLRSTRNEKPLHYSLQIQSFSLLKTSLATSNRDRYESQFFNAGGYKWKLAVYPNGDVKRNGAGSYIPLF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAACAAAGAGGAAACAGGCAGATTTGGGAGACGAAAAGAACAATATCATTTCCAACGAAGATGTTGCAGTTCTGAGATCCACTAGAAATGAAAAACCTCTCCATTA
TTCCTTACAAATCCAATCTTTCTCGTTGCTCAAGACCTCACTTGCTACTTCCAATCGTGACAGATATGAATCCCAGTTCTTCAATGCTGGCGGTTATAAATGGAAATTAG
CAGTGTATCCGAATGGAGATGTGAAAAGAAACGGGGCTGGATCATATATCCCTCTATTTGATGGGAAAGTAAGGCGTTTTCATGCAATCAAGAAAGAGCGGGGGTTTCTC
TTTTGGCATCATATAACTGGACTGGTCCAAAGTGCGATTCCTTGCCAAGTCGATTTATTCATCACAGAAAATCTTAGCATTCCTCTCTCTAACCAGAAGTCTGTATTATG
GAGCAATGCTATAAGTGCTATTCTTTGGCATACTTGGAAGATATGGCTATATCCTAAAGGATGCTCCCTGGCAAGTGCTGGGTTTTTGTCCTTGTACCTGATATTTGATA
GTTTCAAAGAGCATCCTCAAGGTTCTCGAGTGTATGCTGAATTTGAGATAGCTGTGCTCAGTAAATATGATTCTGGAGTTGGACACAAAAAAGAATATGGAGCGCCAACA
ATTTCATCTAATTCTCAGATTCATCGAGATCCTGTGCACAGGACTCTCGTCGAATTGGAGTTTCTGTGGAGAATATTGCTAAGGCTTCCATTGGGTAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGAACAAAGAGGAAACAGGCAGATTTGGGAGACGAAAAGAACAATATCATTTCCAACGAAGATGTTGCAGTTCTGAGATCCACTAGAAATGAAAAACCTCTCCATTA
TTCCTTACAAATCCAATCTTTCTCGTTGCTCAAGACCTCACTTGCTACTTCCAATCGTGACAGATATGAATCCCAGTTCTTCAATGCTGGCGGTTATAAATGGAAATTAG
CAGTGTATCCGAATGGAGATGTGAAAAGAAACGGGGCTGGATCATATATCCCTCTATTTGATGGGAAAGTAAGGCGTTTTCATGCAATCAAGAAAGAGCGGGGGTTTCTC
TTTTGGCATCATATAACTGGACTGGTCCAAAGTGCGATTCCTTGCCAAGTCGATTTATTCATCACAGAAAATCTTAGCATTCCTCTCTCTAACCAGAAGTCTGTATTATG
GAGCAATGCTATAAGTGCTATTCTTTGGCATACTTGGAAGATATGGCTATATCCTAAAGGATGCTCCCTGGCAAGTGCTGGGTTTTTGTCCTTGTACCTGATATTTGATA
GTTTCAAAGAGCATCCTCAAGGTTCTCGAGTGTATGCTGAATTTGAGATAGCTGTGCTCAGTAAATATGATTCTGGAGTTGGACACAAAAAAGAATATGGAGCGCCAACA
ATTTCATCTAATTCTCAGATTCATCGAGATCCTGTGCACAGGACTCTCGTCGAATTGGAGTTTCTGTGGAGAATATTGCTAAGGCTTCCATTGGGTAAGTAA
Protein sequenceShow/hide protein sequence
MGTKRKQADLGDEKNNIISNEDVAVLRSTRNEKPLHYSLQIQSFSLLKTSLATSNRDRYESQFFNAGGYKWKLAVYPNGDVKRNGAGSYIPLFDGKVRRFHAIKKERGFL
FWHHITGLVQSAIPCQVDLFITENLSIPLSNQKSVLWSNAISAILWHTWKIWLYPKGCSLASAGFLSLYLIFDSFKEHPQGSRVYAEFEIAVLSKYDSGVGHKKEYGAPT
ISSNSQIHRDPVHRTLVELEFLWRILLRLPLGK