; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc04g29200 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g29200
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptionubiquitin carboxyl-terminal hydrolase 13-like
Genome locationchr4:21662174..21663988
RNA-Seq ExpressionMoc04g29200
SyntenyMoc04g29200
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002083 - MATH/TRAF domain
IPR008974 - TRAF-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022146379.1 ubiquitin carboxyl-terminal hydrolase 12-like [Momordica charantia]5.2e-6755.96Show/hide
Query:  MQRNHII--SPSSQADSGS---VLRSIRDEKPLHYTLQIQPFSLLKTALATSSRDRYESPIFSVAGFKWKLAVYPSGDVKRNGS-NHISLYLVTAEDDIP
        M+R +II  S SS+AD+ S   V+RS RDEKPLHYTLQIQ FSLLKTAL  S  DRYES IF+  G+KWKLA+YP+GDVKRNGS +HISLYLV AEDDIP
Subjt:  MQRNHII--SPSSQADSGS---VLRSIRDEKPLHYTLQIQPFSLLKTALATSSRDRYESPIFSVAGFKWKLAVYPSGDVKRNGS-NHISLYLVTAEDDIP

Query:  TLDLTVVFTILVYDNLRDNYLAVLDGKVRRFHAMKKEWGFEKLVSLETFNDSSNGFLVDDCCAFGVDIFVMKC-----KYWF--------EFGDLGL---
        T ++ VVFT LVYD+L+D YLAV DG VRRFHA+K EWGFEKL+SL+TFNDSSNGFLVDDCCAFGVD+ VMK      K W         E G L L   
Subjt:  TLDLTVVFTILVYDNLRDNYLAVLDGKVRRFHAMKKEWGFEKLVSLETFNDSSNGFLVDDCCAFGVDIFVMKC-----KYWF--------EFGDLGL---

Query:  ----------------------------------------GFPDFMSLRDLNEVTKGYICDDTLIVEVKINVVSTLK
                                                G P+F+SL +L +  KGY+ +DTL VEVKINV+ST K
Subjt:  ----------------------------------------GFPDFMSLRDLNEVTKGYICDDTLIVEVKINVVSTLK

XP_022146381.1 ubiquitin carboxyl-terminal hydrolase 13-like [Momordica charantia]5.1e-8361.79Show/hide
Query:  MQRNHIISPSSQADSGSVLRSIRDEKPLHYTLQIQPFSLLKTALATSSRDRYESPIFSVAGFKWKLAVYPSGDVKRNGSNHISLYLVTAEDDIPTLDLTV
        MQRN+ ISPSS+A + SVL   RDEKPLHYTLQIQ FSLLKTALA S+ DRYES IF+  G+KWKLAVYP+GDVKRNGS+HISLYLV AED IPT ++ V
Subjt:  MQRNHIISPSSQADSGSVLRSIRDEKPLHYTLQIQPFSLLKTALATSSRDRYESPIFSVAGFKWKLAVYPSGDVKRNGSNHISLYLVTAEDDIPTLDLTV

Query:  VFTILVYDNLRDNYLAVLDGKVRRFHAMKKEWGFEKLVSLETFNDSSNGFLVDDCCAFGVDIFVMKC---------------------------------
        VFT LVYDNL D YLAV D KVRRFH+++ EW FEKL+SLETFNDSSNGFLV DCCAFGVDI V KC                                 
Subjt:  VFTILVYDNLRDNYLAVLDGKVRRFHAMKKEWGFEKLVSLETFNDSSNGFLVDDCCAFGVDIFVMKC---------------------------------

Query:  --------------------------------KYWFEFGDLGLGFPDFMSLRDLNEVTKGYICDDTLIVEVKINVVSTLK
                                        KYWFEFGDLGLGF +FMSLRDLNEVTKGYICDDTLIVEVKINVVSTLK
Subjt:  --------------------------------KYWFEFGDLGLGFPDFMSLRDLNEVTKGYICDDTLIVEVKINVVSTLK

XP_022146382.1 uncharacterized protein LOC111015610 [Momordica charantia]2.4e-13377.01Show/hide
Query:  MVNCTFPEVLGARVVGRVSGRVAGSPVSSPALGKRMQRNHIISPSSQADSGSVLRSIRDEKPLHYTLQIQPFSLLKTALATSSRDRYESPIFSVAGFKWK
        MVNCTFPEVLGARVVGRVSGRVAGSPVSSPALGKRMQRNHIISPSSQADSGSVLRSIRDEKPLHYTLQIQPFSLLKTALATSSRDRYESPIFSVAGFKWK
Subjt:  MVNCTFPEVLGARVVGRVSGRVAGSPVSSPALGKRMQRNHIISPSSQADSGSVLRSIRDEKPLHYTLQIQPFSLLKTALATSSRDRYESPIFSVAGFKWK

Query:  LAVYPSGDVKRNGSNHISLYLVTAEDDIPTLDLTVVFTILVYDNLRDNYLAVLDGKVRRFHAMKKEWGFEKLVSLETFNDSSNGFLVDDCCAFGVDIFVM
        LAVYPSGDVKRNGSNHISLYLVTAEDDIPTLDLTVVFTILVYDNLRDNYLAVLDGKVRRFHAMKKEWGFEKLVSLETFNDSSNGFLVDDCCAFGVDIFVM
Subjt:  LAVYPSGDVKRNGSNHISLYLVTAEDDIPTLDLTVVFTILVYDNLRDNYLAVLDGKVRRFHAMKKEWGFEKLVSLETFNDSSNGFLVDDCCAFGVDIFVM

Query:  KC-----------------------------------------------------------------------------KYWFEFGDLGLGFPDFMSLRD
        KC                                                                             KYWFEFGDLGLGFPDFMSLRD
Subjt:  KC-----------------------------------------------------------------------------KYWFEFGDLGLGFPDFMSLRD

Query:  LNEVTKGYICDDTLIVEVKINVVSTLKELFKKEIQ
        LNEVTKGYICDDTLIVEVKINVVSTLKELFKKEIQ
Subjt:  LNEVTKGYICDDTLIVEVKINVVSTLKELFKKEIQ

XP_022146383.1 uncharacterized protein LOC111015611 [Momordica charantia]1.1e-8063.3Show/hide
Query:  VLRSIRDEKPLHYTLQIQPFSLLKTALATSSRDRYESPIFSVAGFKWKLAVYPSGDVKRNGSNHISLYLVTAEDDI--PTLDLTVVFTILVYDNLRDNYL
        +LRSIRDEKPLHYTLQIQPFSLLKTALAT SR+RYESPIF+V GFKWKLA+YP+GD  RNGS +ISLYLVTAED+I   T ++ VV T LVYDNLRDNYL
Subjt:  VLRSIRDEKPLHYTLQIQPFSLLKTALATSSRDRYESPIFSVAGFKWKLAVYPSGDVKRNGSNHISLYLVTAEDDI--PTLDLTVVFTILVYDNLRDNYL

Query:  AVLDGKVRRFHAMKKEWGFEKLVSLETFNDSSNGFLVDDCCAFGVDIFVMK-------------------------------------------------
        AVLDGKVRRFHAMK EWGF KLVSLETFNDSSNGFLVDDCCAFGVDIFVMK                                                 
Subjt:  AVLDGKVRRFHAMKKEWGFEKLVSLETFNDSSNGFLVDDCCAFGVDIFVMK-------------------------------------------------

Query:  -------------CKYWFEFG--DLGLGFPDFMSLRDLNEVTKGYICDDTLIVEVKINVVSTLKELF
                      K WFEFG  + GLGFP+FM LRDL EV KGYICDDTLIV+VKINVVS LK+LF
Subjt:  -------------CKYWFEFG--DLGLGFPDFMSLRDLNEVTKGYICDDTLIVEVKINVVSTLKELF

XP_038874970.1 uncharacterized protein LOC120067490 [Benincasa hispida]7.5e-5843.27Show/hide
Query:  DSGSVLRSIRDEKPLHYTLQIQPFSLLKTALATSS-RDRYESPIFSVAGFKWKLAVYPSGDVKRNGSNHISLYLVTAEDDIPT--LDLTVVFTILVYDNL
        +S  V+R+ RDEKPLHYTL+IQ FSLLK A+A SS R+RYES IF   G+KWKLA+YP+GD KRN +NHISLYLV+AED+I +  L++ V+   LVYDNL
Subjt:  DSGSVLRSIRDEKPLHYTLQIQPFSLLKTALATSS-RDRYESPIFSVAGFKWKLAVYPSGDVKRNGSNHISLYLVTAEDDIPT--LDLTVVFTILVYDNL

Query:  RDNYLAVLDGKVRRFHAMKKEWGFEKLVSLETFNDSSNGFLVDDCCAFGVDIFVMK--------------------------------------------
        +D Y  + DGKVR FHA+KKEWGFEKLVSL+TFND+SNG LVDDCCAFGVD+ VMK                                            
Subjt:  RDNYLAVLDGKVRRFHAMKKEWGFEKLVSLETFNDSSNGFLVDDCCAFGVDIFVMK--------------------------------------------

Query:  ----------------------------------------------------------CKYWFEFGDLGLGFPDFMSLRDLNEVTKGYICDDTLIVEVKI
                                                                   K+WF+      GF +FMSL ++ E  KG++CDDTL+VEVKI
Subjt:  ----------------------------------------------------------CKYWFEFGDLGLGFPDFMSLRDLNEVTKGYICDDTLIVEVKI

Query:  NVVSTLKELFKK
        NV+S LK  ++K
Subjt:  NVVSTLKELFKK

TrEMBL top hitse value%identityAlignment
A0A6J1CX47 probable inactive serine/threonine-protein kinase fnkC4.0e-5746.58Show/hide
Query:  VLRSIRDEKPLHYTLQIQPFSLLKTALATSSRDRYESPIFSVAGFKWKLAVYPSGDVKRNGSNHISLYLVTAEDDIPTLDLTVVFTILVYDNLRDNYLAV
        V+RS RDEKPLHYTLQIQ FSLLK ALA+S+RDRYES IF+  G+KWKLAVYP+GDVKRNG++HISLYLV A+DDI                        
Subjt:  VLRSIRDEKPLHYTLQIQPFSLLKTALATSSRDRYESPIFSVAGFKWKLAVYPSGDVKRNGSNHISLYLVTAEDDIPTLDLTVVFTILVYDNLRDNYLAV

Query:  LDGKVRRFHAMKKEWGFEKLVSLETFNDSSNGFLVDDCCAFGVDIFVMKC----------------KY--------------------------------
          GKVRRFHAMK EWGFEKL+SL+TFNDSSNGF+V DCC FGVD+ VMKC                KY                                
Subjt:  LDGKVRRFHAMKKEWGFEKLVSLETFNDSSNGFLVDDCCAFGVDIFVMKC----------------KY--------------------------------

Query:  ----------------------------------------WFEFGDL----GLGFPDFMSLRDLNEVTKGYICDDTLIVEVKINVVSTLKEL
                                                WF FG +    G G P+F+SLRDLNE T+G+I DDT+IVEVKINVVSTLK++
Subjt:  ----------------------------------------WFEFGDL----GLGFPDFMSLRDLNEVTKGYICDDTLIVEVKINVVSTLKEL

A0A6J1CXZ0 ubiquitin carboxyl-terminal hydrolase 12-like2.5e-6755.96Show/hide
Query:  MQRNHII--SPSSQADSGS---VLRSIRDEKPLHYTLQIQPFSLLKTALATSSRDRYESPIFSVAGFKWKLAVYPSGDVKRNGS-NHISLYLVTAEDDIP
        M+R +II  S SS+AD+ S   V+RS RDEKPLHYTLQIQ FSLLKTAL  S  DRYES IF+  G+KWKLA+YP+GDVKRNGS +HISLYLV AEDDIP
Subjt:  MQRNHII--SPSSQADSGS---VLRSIRDEKPLHYTLQIQPFSLLKTALATSSRDRYESPIFSVAGFKWKLAVYPSGDVKRNGS-NHISLYLVTAEDDIP

Query:  TLDLTVVFTILVYDNLRDNYLAVLDGKVRRFHAMKKEWGFEKLVSLETFNDSSNGFLVDDCCAFGVDIFVMKC-----KYWF--------EFGDLGL---
        T ++ VVFT LVYD+L+D YLAV DG VRRFHA+K EWGFEKL+SL+TFNDSSNGFLVDDCCAFGVD+ VMK      K W         E G L L   
Subjt:  TLDLTVVFTILVYDNLRDNYLAVLDGKVRRFHAMKKEWGFEKLVSLETFNDSSNGFLVDDCCAFGVDIFVMKC-----KYWF--------EFGDLGL---

Query:  ----------------------------------------GFPDFMSLRDLNEVTKGYICDDTLIVEVKINVVSTLK
                                                G P+F+SL +L +  KGY+ +DTL VEVKINV+ST K
Subjt:  ----------------------------------------GFPDFMSLRDLNEVTKGYICDDTLIVEVKINVVSTLK

A0A6J1CYF6 uncharacterized protein LOC1110156115.2e-8163.3Show/hide
Query:  VLRSIRDEKPLHYTLQIQPFSLLKTALATSSRDRYESPIFSVAGFKWKLAVYPSGDVKRNGSNHISLYLVTAEDDI--PTLDLTVVFTILVYDNLRDNYL
        +LRSIRDEKPLHYTLQIQPFSLLKTALAT SR+RYESPIF+V GFKWKLA+YP+GD  RNGS +ISLYLVTAED+I   T ++ VV T LVYDNLRDNYL
Subjt:  VLRSIRDEKPLHYTLQIQPFSLLKTALATSSRDRYESPIFSVAGFKWKLAVYPSGDVKRNGSNHISLYLVTAEDDI--PTLDLTVVFTILVYDNLRDNYL

Query:  AVLDGKVRRFHAMKKEWGFEKLVSLETFNDSSNGFLVDDCCAFGVDIFVMK-------------------------------------------------
        AVLDGKVRRFHAMK EWGF KLVSLETFNDSSNGFLVDDCCAFGVDIFVMK                                                 
Subjt:  AVLDGKVRRFHAMKKEWGFEKLVSLETFNDSSNGFLVDDCCAFGVDIFVMK-------------------------------------------------

Query:  -------------CKYWFEFG--DLGLGFPDFMSLRDLNEVTKGYICDDTLIVEVKINVVSTLKELF
                      K WFEFG  + GLGFP+FM LRDL EV KGYICDDTLIV+VKINVVS LK+LF
Subjt:  -------------CKYWFEFG--DLGLGFPDFMSLRDLNEVTKGYICDDTLIVEVKINVVSTLKELF

A0A6J1CZ69 ubiquitin carboxyl-terminal hydrolase 13-like2.5e-8361.79Show/hide
Query:  MQRNHIISPSSQADSGSVLRSIRDEKPLHYTLQIQPFSLLKTALATSSRDRYESPIFSVAGFKWKLAVYPSGDVKRNGSNHISLYLVTAEDDIPTLDLTV
        MQRN+ ISPSS+A + SVL   RDEKPLHYTLQIQ FSLLKTALA S+ DRYES IF+  G+KWKLAVYP+GDVKRNGS+HISLYLV AED IPT ++ V
Subjt:  MQRNHIISPSSQADSGSVLRSIRDEKPLHYTLQIQPFSLLKTALATSSRDRYESPIFSVAGFKWKLAVYPSGDVKRNGSNHISLYLVTAEDDIPTLDLTV

Query:  VFTILVYDNLRDNYLAVLDGKVRRFHAMKKEWGFEKLVSLETFNDSSNGFLVDDCCAFGVDIFVMKC---------------------------------
        VFT LVYDNL D YLAV D KVRRFH+++ EW FEKL+SLETFNDSSNGFLV DCCAFGVDI V KC                                 
Subjt:  VFTILVYDNLRDNYLAVLDGKVRRFHAMKKEWGFEKLVSLETFNDSSNGFLVDDCCAFGVDIFVMKC---------------------------------

Query:  --------------------------------KYWFEFGDLGLGFPDFMSLRDLNEVTKGYICDDTLIVEVKINVVSTLK
                                        KYWFEFGDLGLGF +FMSLRDLNEVTKGYICDDTLIVEVKINVVSTLK
Subjt:  --------------------------------KYWFEFGDLGLGFPDFMSLRDLNEVTKGYICDDTLIVEVKINVVSTLK

A0A6J1CZF7 uncharacterized protein LOC1110156101.2e-13377.01Show/hide
Query:  MVNCTFPEVLGARVVGRVSGRVAGSPVSSPALGKRMQRNHIISPSSQADSGSVLRSIRDEKPLHYTLQIQPFSLLKTALATSSRDRYESPIFSVAGFKWK
        MVNCTFPEVLGARVVGRVSGRVAGSPVSSPALGKRMQRNHIISPSSQADSGSVLRSIRDEKPLHYTLQIQPFSLLKTALATSSRDRYESPIFSVAGFKWK
Subjt:  MVNCTFPEVLGARVVGRVSGRVAGSPVSSPALGKRMQRNHIISPSSQADSGSVLRSIRDEKPLHYTLQIQPFSLLKTALATSSRDRYESPIFSVAGFKWK

Query:  LAVYPSGDVKRNGSNHISLYLVTAEDDIPTLDLTVVFTILVYDNLRDNYLAVLDGKVRRFHAMKKEWGFEKLVSLETFNDSSNGFLVDDCCAFGVDIFVM
        LAVYPSGDVKRNGSNHISLYLVTAEDDIPTLDLTVVFTILVYDNLRDNYLAVLDGKVRRFHAMKKEWGFEKLVSLETFNDSSNGFLVDDCCAFGVDIFVM
Subjt:  LAVYPSGDVKRNGSNHISLYLVTAEDDIPTLDLTVVFTILVYDNLRDNYLAVLDGKVRRFHAMKKEWGFEKLVSLETFNDSSNGFLVDDCCAFGVDIFVM

Query:  KC-----------------------------------------------------------------------------KYWFEFGDLGLGFPDFMSLRD
        KC                                                                             KYWFEFGDLGLGFPDFMSLRD
Subjt:  KC-----------------------------------------------------------------------------KYWFEFGDLGLGFPDFMSLRD

Query:  LNEVTKGYICDDTLIVEVKINVVSTLKELFKKEIQ
        LNEVTKGYICDDTLIVEVKINVVSTLKELFKKEIQ
Subjt:  LNEVTKGYICDDTLIVEVKINVVSTLKELFKKEIQ

SwissProt top hitse value%identityAlignment
Q84WU2 Ubiquitin C-terminal hydrolase 137.4e-0826Show/hide
Query:  DEKPLHYTLQIQPFSLLKTALATSSRDRYESPIFSVAGFKWKLAVYPSGDVKRNGSNHISLYLVTAE-DDIP-TLDLTVVFTILVYDNLRDNYLAVLDGK
        D   L +T  I  F+ L T        ++ S +F V G+KW++ ++P G    N  +H+S+YL  A+  ++P        F++ V + + + Y ++    
Subjt:  DEKPLHYTLQIQPFSLLKTALATSSRDRYESPIFSVAGFKWKLAVYPSGDVKRNGSNHISLYLVTAE-DDIP-TLDLTVVFTILVYDNLRDNYLAVLDGK

Query:  VRRFHAMKKEWGFEKLVSLETFNDSSNGFLVDDCCAFGVDIFVMK-CKYW
          +F+A + +WGF   + L    + + G+LV+D      ++ V K   YW
Subjt:  VRRFHAMKKEWGFEKLVSLETFNDSSNGFLVDDCCAFGVDIFVMK-CKYW

Q8T126 Probable inactive serine/threonine-protein kinase fnkC3.4e-0524.39Show/hide
Query:  LATSSRDRYESPIFSVAGFKWKLAVYPSGDVKRNGSNHISLYLVTAEDDIPTLDLTVVFTILVYDNLRDNYLAVLDGKVRRFHAMKKEWGFEKLVSLETF
        + +   + + SPIF   G KW + +YP G   +  SN++S++L   ++    +  ++     +Y      Y         RF++    +G+ K + + T 
Subjt:  LATSSRDRYESPIFSVAGFKWKLAVYPSGDVKRNGSNHISLYLVTAEDDIPTLDLTVVFTILVYDNLRDNYLAVLDGKVRRFHAMKKEWGFEKLVSLETF

Query:  NDSSNGFLVDDCCAFGVDIFVMK
         D   GFLV+D     V I  +K
Subjt:  NDSSNGFLVDDCCAFGVDIFVMK

Q9FPT1 Ubiquitin C-terminal hydrolase 124.3e-0828Show/hide
Query:  DEKPLHYTLQIQPFSLLKTALATSSRDRYESPIFSVAGFKWKLAVYPSGDVKRNGSNHISLYL-VTAEDDIP-TLDLTVVFTILVYDNLRDNYLAVLDGK
        D   L +T  I  FS   T        ++ S +F V G+KW++ ++P G    N  +H+S+YL V+    +P        F++ V + +   Y  V    
Subjt:  DEKPLHYTLQIQPFSLLKTALATSSRDRYESPIFSVAGFKWKLAVYPSGDVKRNGSNHISLYL-VTAEDDIP-TLDLTVVFTILVYDNLRDNYLAVLDGK

Query:  VRRFHAMKKEWGFEKLVSLETFNDSSNGFLVDDCCAFGVDIFVMK-CKYW
          +F+A + +WGF   + L    D S G+LV+D      ++ V K   YW
Subjt:  VRRFHAMKKEWGFEKLVSLETFNDSSNGFLVDDCCAFGVDIFVMK-CKYW

Q9M2H2 MATH domain and coiled-coil domain-containing protein At3g584405.8e-0529.17Show/hide
Query:  TSSRDRYESPIFSVAGFKWKLAVYPSGDVKRNGSNHISLYLVTAEDDIPTLDLTVVFTILVYDNLRDNYLAVLDGKVRRFHAMKKEWGFEKLVSLETFND
        +S +D+  SP+F+VAG  W+L  +  G        + S+YL      +P      V   +  DN+  N   VL G    F A    WGF+  + LE   +
Subjt:  TSSRDRYESPIFSVAGFKWKLAVYPSGDVKRNGSNHISLYLVTAEDDIPTLDLTVVFTILVYDNLRDNYLAVLDGKVRRFHAMKKEWGFEKLVSLETFND

Query:  SSNGFLVDDCCAFGVDIFVM
         + GFLV+D      ++ V+
Subjt:  SSNGFLVDDCCAFGVDIFVM

Q9M2I9 MATH domain and coiled-coil domain-containing protein At3g582702.4e-0630Show/hide
Query:  LLKTALATSSRDRYESPIFSVAGFKWKLAVYPSGDVKRNGSNHISLYLVTAEDDI--PTLDLTVVFTILVYDNLRDNYLAVLDGKVRRFHAMKKEWGFEK
        ++K   +  SR  Y    F V G KW+L  +P G    NG   +SLYL  A  +           F   V + L D      + K   F A   +WGF  
Subjt:  LLKTALATSSRDRYESPIFSVAGFKWKLAVYPSGDVKRNGSNHISLYLVTAEDDI--PTLDLTVVFTILVYDNLRDNYLAVLDGKVRRFHAMKKEWGFEK

Query:  LVSLETFNDSSNGFLVDDCCAFGVDIFVMK
        ++SL+  +D   GFLV+      VD+ V++
Subjt:  LVSLETFNDSSNGFLVDDCCAFGVDIFVMK

Arabidopsis top hitse value%identityAlignment
AT2G04170.1 TRAF-like family protein9.8e-2438.46Show/hide
Query:  RDEKPLHYTLQIQPFSLLKTALATSSRDRYESPIFSVAGFKWKLAVYPSGDVKRNGSNHISLYL-VTAEDDIPT-LDLTVVFTILVYDNLRDNYLAVLDG
        RDE+P +  L I  FS++K        + YES +F   G+KW+L +Y +G+    G+NHISLY+ +   + +P   ++ V   + VY+  +  YL V DG
Subjt:  RDEKPLHYTLQIQPFSLLKTALATSSRDRYESPIFSVAGFKWKLAVYPSGDVKRNGSNHISLYL-VTAEDDIPT-LDLTVVFTILVYDNLRDNYLAVLDG

Query:  KVRRFHAMKKEWGFEKLVSLETFNDSSNGFLVDDCCAFGVDIF
         V+R++  KKEWG+ KL+ L TF D++ G+L  D  +FG +IF
Subjt:  KVRRFHAMKKEWGFEKLVSLETFNDSSNGFLVDDCCAFGVDIF

AT2G04170.2 TRAF-like family protein9.8e-2438.46Show/hide
Query:  RDEKPLHYTLQIQPFSLLKTALATSSRDRYESPIFSVAGFKWKLAVYPSGDVKRNGSNHISLYL-VTAEDDIPT-LDLTVVFTILVYDNLRDNYLAVLDG
        RDE+P +  L I  FS++K        + YES +F   G+KW+L +Y +G+    G+NHISLY+ +   + +P   ++ V   + VY+  +  YL V DG
Subjt:  RDEKPLHYTLQIQPFSLLKTALATSSRDRYESPIFSVAGFKWKLAVYPSGDVKRNGSNHISLYL-VTAEDDIPT-LDLTVVFTILVYDNLRDNYLAVLDG

Query:  KVRRFHAMKKEWGFEKLVSLETFNDSSNGFLVDDCCAFGVDIF
         V+R++  KKEWG+ KL+ L TF D++ G+L  D  +FG +IF
Subjt:  KVRRFHAMKKEWGFEKLVSLETFNDSSNGFLVDDCCAFGVDIF

AT2G04190.1 TRAF-like family protein3.4e-2440.67Show/hide
Query:  VLRSIRDEKPLHYTLQIQPFSLLKTALATSSRDRYESPIF-SVAGFKWKLAVYPSGDVKRNGSNHISLYLVTAEDDIPTLD--LTVVFTILVYDNLRDNY
        V R++RDE P H  L I  FS +         + YES +F +    KW+L +Y +G+    GSNHISLYL + E D  T D  +  V  + VY+  +D Y
Subjt:  VLRSIRDEKPLHYTLQIQPFSLLKTALATSSRDRYESPIF-SVAGFKWKLAVYPSGDVKRNGSNHISLYLVTAEDDIPTLD--LTVVFTILVYDNLRDNY

Query:  LAVLDGKVRRFHAMKKEWGFEKLVSLETFNDSSNGFLVDDCCAFGVDIFV
        L V DG  +R++   KEWG+ KL+ L TF D+S G+L  D  +FG +IF+
Subjt:  LAVLDGKVRRFHAMKKEWGFEKLVSLETFNDSSNGFLVDDCCAFGVDIFV

AT3G17380.1 TRAF-like family protein8.0e-3441.51Show/hide
Query:  SSQADSGSVLRSIRDEKPLHYTLQIQPFSLLKTALATSSRDRYESPIFSVAGFKWKLAVYPSGDVKRNGSNHISLYLVTAEDD--IPTLDLTVVFTILVY
        +S  D   +++SI D  P HY ++I+ FSL    L   + +RYE+  F   G+KWKL +YP+G+  +N  +H+S+YL  A+     P  ++  VF + + 
Subjt:  SSQADSGSVLRSIRDEKPLHYTLQIQPFSLLKTALATSSRDRYESPIFSVAGFKWKLAVYPSGDVKRNGSNHISLYLVTAEDD--IPTLDLTVVFTILVY

Query:  DNLRDNYLAVLDGKVRRFHAMKKEWGFEKLVSLETFNDSSNGFLVDDCCAFGVDIFVMK
        D  +DNYL +L G  RRFH++K+EWGF+K +   TF+D+SNG+L++D C FG D+FV K
Subjt:  DNLRDNYLAVLDGKVRRFHAMKKEWGFEKLVSLETFNDSSNGFLVDDCCAFGVDIFVMK

AT5G26260.1 TRAF-like family protein5.2e-2536.47Show/hide
Query:  GKRMQRNHIISPSSQADSGSVLRSIRDEKPLHYTLQIQPFSLLKTALATSSRDRYESPIFSVAGFKWKLAVYPSGDVKRNGSNHISLYL-VTAEDDIPT-
        G+ ++ N+  S S  ++ G   R +RDE+P    + I  FS++K        + YES IF  AG+KW+L +Y  G+ K   +NHISLY  +   + +P  
Subjt:  GKRMQRNHIISPSSQADSGSVLRSIRDEKPLHYTLQIQPFSLLKTALATSSRDRYESPIFSVAGFKWKLAVYPSGDVKRNGSNHISLYL-VTAEDDIPT-

Query:  LDLTVVFTILVYDNLRDNYLAVLDGKVRRFHAMKKEWGFEKLVSLETFNDSSNGFLVDDCCAFGVDIFVM
         ++ V   + V++     YL+V DG V+R++  KKEWGF +L+SL TF +++ G+LV D  +FG +IF++
Subjt:  LDLTVVFTILVYDNLRDNYLAVLDGKVRRFHAMKKEWGFEKLVSLETFNDSSNGFLVDDCCAFGVDIFVM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAACTGCACGTTTCCAGAGGTGCTTGGAGCACGGGTTGTGGGCCGGGTTTCGGGTAGAGTTGCGGGCTCGCCTGTTAGCTCGCCAGCATTGGGAAAGAGAATGCA
GAGGAACCATATCATCTCCCCATCATCTCAGGCAGATTCTGGTTCTGTTTTAAGGTCCATTAGAGATGAAAAACCTCTCCATTATACGTTACAAATCCAACCCTTTTCGT
TGCTCAAGACTGCACTTGCTACTTCCAGTCGTGACAGATATGAATCCCCCATCTTCAGTGTCGCCGGTTTTAAATGGAAATTAGCAGTCTATCCCAGTGGAGATGTGAAA
AGAAATGGGTCCAATCATATATCTCTCTATTTGGTAACTGCTGAGGATGACATTCCTACTTTAGACCTCACTGTTGTGTTTACGATTCTTGTTTATGATAATCTCCGAGA
CAACTATTTGGCAGTCCTAGATGGGAAAGTAAGACGTTTTCATGCAATGAAGAAAGAGTGGGGGTTTGAAAAGTTGGTTTCACTTGAAACTTTCAACGACTCTTCAAATG
GGTTCTTAGTTGATGATTGTTGTGCATTTGGAGTTGACATTTTTGTAATGAAATGTAAGTATTGGTTCGAGTTTGGCGATTTAGGTTTGGGTTTTCCGGATTTCATGTCT
TTGAGAGATCTCAATGAAGTCACGAAGGGCTACATTTGTGATGACACTTTGATTGTTGAAGTGAAGATCAATGTTGTGTCTACTTTGAAAGAGCTTTTCAAGAAGGAAAT
TCAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGTGAACTGCACGTTTCCAGAGGTGCTTGGAGCACGGGTTGTGGGCCGGGTTTCGGGTAGAGTTGCGGGCTCGCCTGTTAGCTCGCCAGCATTGGGAAAGAGAATGCA
GAGGAACCATATCATCTCCCCATCATCTCAGGCAGATTCTGGTTCTGTTTTAAGGTCCATTAGAGATGAAAAACCTCTCCATTATACGTTACAAATCCAACCCTTTTCGT
TGCTCAAGACTGCACTTGCTACTTCCAGTCGTGACAGATATGAATCCCCCATCTTCAGTGTCGCCGGTTTTAAATGGAAATTAGCAGTCTATCCCAGTGGAGATGTGAAA
AGAAATGGGTCCAATCATATATCTCTCTATTTGGTAACTGCTGAGGATGACATTCCTACTTTAGACCTCACTGTTGTGTTTACGATTCTTGTTTATGATAATCTCCGAGA
CAACTATTTGGCAGTCCTAGATGGGAAAGTAAGACGTTTTCATGCAATGAAGAAAGAGTGGGGGTTTGAAAAGTTGGTTTCACTTGAAACTTTCAACGACTCTTCAAATG
GGTTCTTAGTTGATGATTGTTGTGCATTTGGAGTTGACATTTTTGTAATGAAATGTAAGTATTGGTTCGAGTTTGGCGATTTAGGTTTGGGTTTTCCGGATTTCATGTCT
TTGAGAGATCTCAATGAAGTCACGAAGGGCTACATTTGTGATGACACTTTGATTGTTGAAGTGAAGATCAATGTTGTGTCTACTTTGAAAGAGCTTTTCAAGAAGGAAAT
TCAATAA
Protein sequenceShow/hide protein sequence
MVNCTFPEVLGARVVGRVSGRVAGSPVSSPALGKRMQRNHIISPSSQADSGSVLRSIRDEKPLHYTLQIQPFSLLKTALATSSRDRYESPIFSVAGFKWKLAVYPSGDVK
RNGSNHISLYLVTAEDDIPTLDLTVVFTILVYDNLRDNYLAVLDGKVRRFHAMKKEWGFEKLVSLETFNDSSNGFLVDDCCAFGVDIFVMKCKYWFEFGDLGLGFPDFMS
LRDLNEVTKGYICDDTLIVEVKINVVSTLKELFKKEIQ