; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc04g29250 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g29250
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionPoly(A)-specific ribonuclease
Genome locationchr4:21689938..21691161
RNA-Seq ExpressionMoc04g29250
SyntenyMoc04g29250
Gene Ontology termsGO:0043928 - exonucleolytic catabolism of deadenylated mRNA (biological process)
GO:0090503 - RNA phosphodiester bond hydrolysis, exonucleolytic (biological process)
GO:0000932 - P-body (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0030015 - CCR4-NOT core complex (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004535 - poly(A)-specific ribonuclease activity (molecular function)
InterPro domainsIPR006941 - Ribonuclease CAF1
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR039637 - CCR4-NOT transcription complex subunit 7/8/Pop2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022146384.1 putative CCR4-associated factor 1 homolog 8 [Momordica charantia]1.7e-16688.46Show/hide
Query:  QHNGNTFRVMMSPKNMEKEIVGKSTTAPRSIRHNREVWSHNLHEELELLNEYLPEFSVVAIDTEFPGFLWCTPKGISEEEFYHCLRFNVNRLNILQLGLT
        + N N FRVM S +NMEK IV KST APRSI HNREVWS NL EELELLNEYLPEF VV ID EFPGFLWCTPKGISEEEFYHCLRFNVNRLNILQLGLT
Subjt:  QHNGNTFRVMMSPKNMEKEIVGKSTTAPRSIRHNREVWSHNLHEELELLNEYLPEFSVVAIDTEFPGFLWCTPKGISEEEFYHCLRFNVNRLNILQLGLT

Query:  LADQKGNIAMTWEFNFRDFDHVSDMEDVSSLDSFLKNKGFDFYRLKKYGIAQEDFTTLFLPICRSGQIKRWITFHGFYDIAYLLKLLKIKSIPISMATFA
        LADQKGNIAMTWEFNFRDFDHVSDMEDVSSLDSFLKNKGFDFY+LKKYGIAQEDFTTLFLPICRSGQIKRWITFHGFYDI YLLKLLKIKSIPISMATFA
Subjt:  LADQKGNIAMTWEFNFRDFDHVSDMEDVSSLDSFLKNKGFDFYRLKKYGIAQEDFTTLFLPICRSGQIKRWITFHGFYDIAYLLKLLKIKSIPISMATFA

Query:  ATAQHLLGTVSDLKHMARYCDGLLDGDLGLKKLAKLLDVKRIGTAHFAGSDSLLTASVYIKMKQIFKLPLEQSEGFLYGLPYPIKGFRSVVKIIDTSTMT
         TAQHLLGTVSDLKHMARYCDGLLDG+LGLKKLAKLLDVKRI  AHFA SD+L T SVY KMKQIFKLPLEQ EGFLYGLPYPI GF+SV KIID STMT
Subjt:  ATAQHLLGTVSDLKHMARYCDGLLDGDLGLKKLAKLLDVKRIGTAHFAGSDSLLTASVYIKMKQIFKLPLEQSEGFLYGLPYPIKGFRSVVKIIDTSTMT

Query:  PPPPLPSKFSMLSFRSSPPLLVDIKSSKLNIGHSVVVG
        PPPPLPSKFS+LSF SS PLLV IKSSKLN G SV+VG
Subjt:  PPPPLPSKFSMLSFRSSPPLLVDIKSSKLNIGHSVVVG

XP_022153955.1 putative CCR4-associated factor 1 homolog 8 [Momordica charantia]6.5e-10570.83Show/hide
Query:  MEKEIVGKSTTAPRSIRHNREVWSHNLHEELELLNEYLPEFSVVAIDTEFPGFLWCTPKGISEEEFYHCLRFN-VNRLNILQLGLTLADQKGNIAMTWEF
        MEK I   S  APRS+R  +EVWSHNLHEELELLNEY+PEF VV ID       W   + I        LR + + RLNILQLGLTL DQK N+AMT EF
Subjt:  MEKEIVGKSTTAPRSIRHNREVWSHNLHEELELLNEYLPEFSVVAIDTEFPGFLWCTPKGISEEEFYHCLRFN-VNRLNILQLGLTLADQKGNIAMTWEF

Query:  NFRDFDHVSDMEDVSSLDSFLKNKGFDFYRLKKYGIAQEDFTTLFLPICRSGQIKRWITFHGFYDIAYLLKLLKIKSIPISMATFAATAQHLLGTVSDLK
        NFRDFDH+SDM+ +S LD FLKN GFDFY+LKK GI  E+FTTLFLPIC SG+I+R ITFHGFY+IAYLLK LKIK IPI MATFAATAQHLLG +S+LK
Subjt:  NFRDFDHVSDMEDVSSLDSFLKNKGFDFYRLKKYGIAQEDFTTLFLPICRSGQIKRWITFHGFYDIAYLLKLLKIKSIPISMATFAATAQHLLGTVSDLK

Query:  HMARYCDGLLDGDLGLKKLAKLLDVKRIGTAHFAGSDSLLTASVYIKMKQIFKLPLEQSEGFLYGLPYPIKGFRSVVKIIDTSTMTPP
        HMARYCDGLLDG+L LKK AKLLDVKRIGTAHFAG DSLLTAS+Y KMKQ+FKLPLEQ EGFLY LP+ IK F S++KII+ S  TPP
Subjt:  HMARYCDGLLDGDLGLKKLAKLLDVKRIGTAHFAGSDSLLTASVYIKMKQIFKLPLEQSEGFLYGLPYPIKGFRSVVKIIDTSTMTPP

XP_022154798.1 probable CCR4-associated factor 1 homolog 6 [Momordica charantia]8.1e-14073.79Show/hide
Query:  MEKEIVGKSTTAPRSIRHNREVWSHNLHEELELLNEYLPEFSVVAIDTEF-----------------------------PGFLWCTPKGISEEEFYHCLR
        MEK   GKS TAPRS+  NREVWS+NLH+ELE+LNEYLPEF +VAIDTEF                             PGFL  TPKG+SEEEFY CLR
Subjt:  MEKEIVGKSTTAPRSIRHNREVWSHNLHEELELLNEYLPEFSVVAIDTEF-----------------------------PGFLWCTPKGISEEEFYHCLR

Query:  FNVNRLNILQLGLTLADQKGNIAMTWEFNFRDFDHVSDMEDVSSLDSFLKNKGFDFYRLKKYGIAQEDFTTLFLPICRSGQIKRWITFHGFYDIAYLLKL
        FNVNRLNILQLGLTLA+Q GN+AMTWEFNFRDFDH+SDME VSSLDSFLKNKGFDFY+LK+ GIA EDFTTLFLPICRSG+I+RWITFHGFYDIAYLLKL
Subjt:  FNVNRLNILQLGLTLADQKGNIAMTWEFNFRDFDHVSDMEDVSSLDSFLKNKGFDFYRLKKYGIAQEDFTTLFLPICRSGQIKRWITFHGFYDIAYLLKL

Query:  LKIKSIPISMATFAATAQHLLGTVSDLKHMARYCDGLLDGDLGLKKLAKLLDVKRIGTAHFAGSDSLLTASVYIKMKQIFKLPLEQSEGFLYGLPYPIKG
        LKIK IPISMATFAATAQHLLGTVSDLKHM RYCDGLLDGDLGLKKLAKLLDVKRIG AHFAGSDSLLTA+VY KMKQ+FK+P+EQ EGFLYGLP+ I+ 
Subjt:  LKIKSIPISMATFAATAQHLLGTVSDLKHMARYCDGLLDGDLGLKKLAKLLDVKRIGTAHFAGSDSLLTASVYIKMKQIFKLPLEQSEGFLYGLPYPIKG

Query:  FRSVVKIIDTSTMTPPPPLPSKFSMLSFRSSPPLLVDIKSSKLNIGHSVVV
        F+ +VKI+D S MTPPPP   +   L F S PP  +DI SSKL  GHSV V
Subjt:  FRSVVKIIDTSTMTPPPPLPSKFSMLSFRSSPPLLVDIKSSKLNIGHSVVV

XP_022928830.1 putative CCR4-associated factor 1 homolog 8 [Cucurbita moschata]9.6e-10168.05Show/hide
Query:  REVWSHNLHEELELLNEYLPEFSVVAIDTEFPGFLWCTPKGISEEEFYHCLRFNVNRLNILQLGLTLADQKGNIAMTWEFNFRDFDHVSDMEDVSSLDSF
        REVWSHNL EE+EL+  YL EF +VAIDTEFPGFL  TPKG+S+EEFY CL+FNVNRL+ILQLGLTL D  G I MTWEFNF+DFD +S+ME V SLDSF
Subjt:  REVWSHNLHEELELLNEYLPEFSVVAIDTEFPGFLWCTPKGISEEEFYHCLRFNVNRLNILQLGLTLADQKGNIAMTWEFNFRDFDHVSDMEDVSSLDSF

Query:  LKNKGFDFYRLKKYGIAQEDFTTLFLPICRSGQIKRWITFHGFYDIAYLLKLLKIKSIPISMATFAATAQHLLGTVSDLKHMARYCDGLLDGDLGLKKLA
        LKNKGF+F +L+  GIA ++F+  F P+ RSG+I++WITFHG YDIAYL+K   I S+P SM+ FA  A HLLGTV+DLKHMARY D L +G+LGLKKLA
Subjt:  LKNKGFDFYRLKKYGIAQEDFTTLFLPICRSGQIKRWITFHGFYDIAYLLKLLKIKSIPISMATFAATAQHLLGTVSDLKHMARYCDGLLDGDLGLKKLA

Query:  KLLDVKRIGTAHFAGSDSLLTASVYIKMKQIFKLPLEQSEGFLYGLPYPIKGFRSVVKIIDTSTMT
        KLL + R+GTAHFAGSDSLLTASVY KMK I K+  +  EGFLYGLPYPI+G+R  V I+D S +T
Subjt:  KLLDVKRIGTAHFAGSDSLLTASVYIKMKQIFKLPLEQSEGFLYGLPYPIKGFRSVVKIIDTSTMT

XP_023550519.1 putative CCR4-associated factor 1 homolog 8 [Cucurbita pepo subsp. pepo]1.1e-9968.05Show/hide
Query:  REVWSHNLHEELELLNEYLPEFSVVAIDTEFPGFLWCTPKGISEEEFYHCLRFNVNRLNILQLGLTLADQKGNIAMTWEFNFRDFDHVSDMEDVSSLDSF
        REVWS+NL EE+EL+  YL EF +VA+DTEFPGFL  TPKG+S+EEFY CL+FNVNRL+ILQLGLTL D+ G I MTWEFNF+DFD +S+ME V SLDSF
Subjt:  REVWSHNLHEELELLNEYLPEFSVVAIDTEFPGFLWCTPKGISEEEFYHCLRFNVNRLNILQLGLTLADQKGNIAMTWEFNFRDFDHVSDMEDVSSLDSF

Query:  LKNKGFDFYRLKKYGIAQEDFTTLFLPICRSGQIKRWITFHGFYDIAYLLKLLKIKSIPISMATFAATAQHLLGTVSDLKHMARYCDGLLDGDLGLKKLA
        LKNKGF+F +L+  GIA E+F+  F P+ RS +I+RWITFHG YDIAYL+K   I S+P SM+ FA  A HLLGTV+DLKHMARY D L +G+LGLKKLA
Subjt:  LKNKGFDFYRLKKYGIAQEDFTTLFLPICRSGQIKRWITFHGFYDIAYLLKLLKIKSIPISMATFAATAQHLLGTVSDLKHMARYCDGLLDGDLGLKKLA

Query:  KLLDVKRIGTAHFAGSDSLLTASVYIKMKQIFKLPLEQSEGFLYGLPYPIKGFRSVVKIIDTSTMT
        KLL + RIGTAHFAGSDSLLTASVY KMK I K+  +  EGFLYGLPYPI+G+R  V I+D S +T
Subjt:  KLLDVKRIGTAHFAGSDSLLTASVYIKMKQIFKLPLEQSEGFLYGLPYPIKGFRSVVKIIDTSTMT

TrEMBL top hitse value%identityAlignment
A0A6J1CXZ5 Poly(A)-specific ribonuclease8.3e-16788.46Show/hide
Query:  QHNGNTFRVMMSPKNMEKEIVGKSTTAPRSIRHNREVWSHNLHEELELLNEYLPEFSVVAIDTEFPGFLWCTPKGISEEEFYHCLRFNVNRLNILQLGLT
        + N N FRVM S +NMEK IV KST APRSI HNREVWS NL EELELLNEYLPEF VV ID EFPGFLWCTPKGISEEEFYHCLRFNVNRLNILQLGLT
Subjt:  QHNGNTFRVMMSPKNMEKEIVGKSTTAPRSIRHNREVWSHNLHEELELLNEYLPEFSVVAIDTEFPGFLWCTPKGISEEEFYHCLRFNVNRLNILQLGLT

Query:  LADQKGNIAMTWEFNFRDFDHVSDMEDVSSLDSFLKNKGFDFYRLKKYGIAQEDFTTLFLPICRSGQIKRWITFHGFYDIAYLLKLLKIKSIPISMATFA
        LADQKGNIAMTWEFNFRDFDHVSDMEDVSSLDSFLKNKGFDFY+LKKYGIAQEDFTTLFLPICRSGQIKRWITFHGFYDI YLLKLLKIKSIPISMATFA
Subjt:  LADQKGNIAMTWEFNFRDFDHVSDMEDVSSLDSFLKNKGFDFYRLKKYGIAQEDFTTLFLPICRSGQIKRWITFHGFYDIAYLLKLLKIKSIPISMATFA

Query:  ATAQHLLGTVSDLKHMARYCDGLLDGDLGLKKLAKLLDVKRIGTAHFAGSDSLLTASVYIKMKQIFKLPLEQSEGFLYGLPYPIKGFRSVVKIIDTSTMT
         TAQHLLGTVSDLKHMARYCDGLLDG+LGLKKLAKLLDVKRI  AHFA SD+L T SVY KMKQIFKLPLEQ EGFLYGLPYPI GF+SV KIID STMT
Subjt:  ATAQHLLGTVSDLKHMARYCDGLLDGDLGLKKLAKLLDVKRIGTAHFAGSDSLLTASVYIKMKQIFKLPLEQSEGFLYGLPYPIKGFRSVVKIIDTSTMT

Query:  PPPPLPSKFSMLSFRSSPPLLVDIKSSKLNIGHSVVVG
        PPPPLPSKFS+LSF SS PLLV IKSSKLN G SV+VG
Subjt:  PPPPLPSKFSMLSFRSSPPLLVDIKSSKLNIGHSVVVG

A0A6J1DIB1 putative CCR4-associated factor 1 homolog 83.1e-10570.83Show/hide
Query:  MEKEIVGKSTTAPRSIRHNREVWSHNLHEELELLNEYLPEFSVVAIDTEFPGFLWCTPKGISEEEFYHCLRFN-VNRLNILQLGLTLADQKGNIAMTWEF
        MEK I   S  APRS+R  +EVWSHNLHEELELLNEY+PEF VV ID       W   + I        LR + + RLNILQLGLTL DQK N+AMT EF
Subjt:  MEKEIVGKSTTAPRSIRHNREVWSHNLHEELELLNEYLPEFSVVAIDTEFPGFLWCTPKGISEEEFYHCLRFN-VNRLNILQLGLTLADQKGNIAMTWEF

Query:  NFRDFDHVSDMEDVSSLDSFLKNKGFDFYRLKKYGIAQEDFTTLFLPICRSGQIKRWITFHGFYDIAYLLKLLKIKSIPISMATFAATAQHLLGTVSDLK
        NFRDFDH+SDM+ +S LD FLKN GFDFY+LKK GI  E+FTTLFLPIC SG+I+R ITFHGFY+IAYLLK LKIK IPI MATFAATAQHLLG +S+LK
Subjt:  NFRDFDHVSDMEDVSSLDSFLKNKGFDFYRLKKYGIAQEDFTTLFLPICRSGQIKRWITFHGFYDIAYLLKLLKIKSIPISMATFAATAQHLLGTVSDLK

Query:  HMARYCDGLLDGDLGLKKLAKLLDVKRIGTAHFAGSDSLLTASVYIKMKQIFKLPLEQSEGFLYGLPYPIKGFRSVVKIIDTSTMTPP
        HMARYCDGLLDG+L LKK AKLLDVKRIGTAHFAG DSLLTAS+Y KMKQ+FKLPLEQ EGFLY LP+ IK F S++KII+ S  TPP
Subjt:  HMARYCDGLLDGDLGLKKLAKLLDVKRIGTAHFAGSDSLLTASVYIKMKQIFKLPLEQSEGFLYGLPYPIKGFRSVVKIIDTSTMTPP

A0A6J1DLA5 Poly(A)-specific ribonuclease3.9e-14073.79Show/hide
Query:  MEKEIVGKSTTAPRSIRHNREVWSHNLHEELELLNEYLPEFSVVAIDTEF-----------------------------PGFLWCTPKGISEEEFYHCLR
        MEK   GKS TAPRS+  NREVWS+NLH+ELE+LNEYLPEF +VAIDTEF                             PGFL  TPKG+SEEEFY CLR
Subjt:  MEKEIVGKSTTAPRSIRHNREVWSHNLHEELELLNEYLPEFSVVAIDTEF-----------------------------PGFLWCTPKGISEEEFYHCLR

Query:  FNVNRLNILQLGLTLADQKGNIAMTWEFNFRDFDHVSDMEDVSSLDSFLKNKGFDFYRLKKYGIAQEDFTTLFLPICRSGQIKRWITFHGFYDIAYLLKL
        FNVNRLNILQLGLTLA+Q GN+AMTWEFNFRDFDH+SDME VSSLDSFLKNKGFDFY+LK+ GIA EDFTTLFLPICRSG+I+RWITFHGFYDIAYLLKL
Subjt:  FNVNRLNILQLGLTLADQKGNIAMTWEFNFRDFDHVSDMEDVSSLDSFLKNKGFDFYRLKKYGIAQEDFTTLFLPICRSGQIKRWITFHGFYDIAYLLKL

Query:  LKIKSIPISMATFAATAQHLLGTVSDLKHMARYCDGLLDGDLGLKKLAKLLDVKRIGTAHFAGSDSLLTASVYIKMKQIFKLPLEQSEGFLYGLPYPIKG
        LKIK IPISMATFAATAQHLLGTVSDLKHM RYCDGLLDGDLGLKKLAKLLDVKRIG AHFAGSDSLLTA+VY KMKQ+FK+P+EQ EGFLYGLP+ I+ 
Subjt:  LKIKSIPISMATFAATAQHLLGTVSDLKHMARYCDGLLDGDLGLKKLAKLLDVKRIGTAHFAGSDSLLTASVYIKMKQIFKLPLEQSEGFLYGLPYPIKG

Query:  FRSVVKIIDTSTMTPPPPLPSKFSMLSFRSSPPLLVDIKSSKLNIGHSVVV
        F+ +VKI+D S MTPPPP   +   L F S PP  +DI SSKL  GHSV V
Subjt:  FRSVVKIIDTSTMTPPPPLPSKFSMLSFRSSPPLLVDIKSSKLNIGHSVVV

A0A6J1ESM7 Poly(A)-specific ribonuclease4.7e-10168.05Show/hide
Query:  REVWSHNLHEELELLNEYLPEFSVVAIDTEFPGFLWCTPKGISEEEFYHCLRFNVNRLNILQLGLTLADQKGNIAMTWEFNFRDFDHVSDMEDVSSLDSF
        REVWSHNL EE+EL+  YL EF +VAIDTEFPGFL  TPKG+S+EEFY CL+FNVNRL+ILQLGLTL D  G I MTWEFNF+DFD +S+ME V SLDSF
Subjt:  REVWSHNLHEELELLNEYLPEFSVVAIDTEFPGFLWCTPKGISEEEFYHCLRFNVNRLNILQLGLTLADQKGNIAMTWEFNFRDFDHVSDMEDVSSLDSF

Query:  LKNKGFDFYRLKKYGIAQEDFTTLFLPICRSGQIKRWITFHGFYDIAYLLKLLKIKSIPISMATFAATAQHLLGTVSDLKHMARYCDGLLDGDLGLKKLA
        LKNKGF+F +L+  GIA ++F+  F P+ RSG+I++WITFHG YDIAYL+K   I S+P SM+ FA  A HLLGTV+DLKHMARY D L +G+LGLKKLA
Subjt:  LKNKGFDFYRLKKYGIAQEDFTTLFLPICRSGQIKRWITFHGFYDIAYLLKLLKIKSIPISMATFAATAQHLLGTVSDLKHMARYCDGLLDGDLGLKKLA

Query:  KLLDVKRIGTAHFAGSDSLLTASVYIKMKQIFKLPLEQSEGFLYGLPYPIKGFRSVVKIIDTSTMT
        KLL + R+GTAHFAGSDSLLTASVY KMK I K+  +  EGFLYGLPYPI+G+R  V I+D S +T
Subjt:  KLLDVKRIGTAHFAGSDSLLTASVYIKMKQIFKLPLEQSEGFLYGLPYPIKGFRSVVKIIDTSTMT

A0A6J1HL76 Poly(A)-specific ribonuclease8.8e-10069.17Show/hide
Query:  REVWSHNLHEELELLNEYLPEFSVVAIDTEFPGFLWCTPKGISEEEFYHCLRFNVNRLNILQLGLTLADQKGNIAMTWEFNFRDFDHVSDMEDVSSLDSF
        R+VWSHNL EE+EL+ + L EF +VAIDTEFPGFL  TPKG+S+EEFY CL+FNVNRL+ILQLGLTL +  G I MTWEFNFRDFD +S+ME V SLDSF
Subjt:  REVWSHNLHEELELLNEYLPEFSVVAIDTEFPGFLWCTPKGISEEEFYHCLRFNVNRLNILQLGLTLADQKGNIAMTWEFNFRDFDHVSDMEDVSSLDSF

Query:  LKNKGFDFYRLKKYGIAQEDFTTLFLPICRSGQIKRWITFHGFYDIAYLLKLLKIKSIPISMATFAATAQHLLGTVSDLKHMARYCDGLLDGDLGLKKLA
        LKNKGF+F  L+ YGIA E+F T F PI RSG+I RWITFHG YDIAYL+K   I+ +P SM+ FA TA H+LGTV+DLKHMA Y   LLDG+LGLKKLA
Subjt:  LKNKGFDFYRLKKYGIAQEDFTTLFLPICRSGQIKRWITFHGFYDIAYLLKLLKIKSIPISMATFAATAQHLLGTVSDLKHMARYCDGLLDGDLGLKKLA

Query:  KLLDVKRIGTAHFAGSDSLLTASVYIKMKQIFKLPLEQSEGFLYGLPYPIKGFRSVVKIIDTSTMT
        KLL V R GTAHFAGSDSLLTASVY KMK I K+     EGFLYGLPYPI+G+R  V I+D S +T
Subjt:  KLLDVKRIGTAHFAGSDSLLTASVYIKMKQIFKLPLEQSEGFLYGLPYPIKGFRSVVKIIDTSTMT

SwissProt top hitse value%identityAlignment
O64773 Probable CCR4-associated factor 1 homolog 53.4e-4041.91Show/hide
Query:  EVWSHNLHEELELLNEYLPEFSVVAIDTEFPGFLWCTPKGISEEEFYHCLRFNVNRLNILQLGLTLADQKGNIAMTWEFNFRDFDHVSDMEDVSSLDSFL
        EVW  N   E+  + + L   + +AIDTEFPG L  TP   S+E  Y  ++FNV+  +++QLGLTL  +   I  TWE N  DF+    +++  S+ +FL
Subjt:  EVWSHNLHEELELLNEYLPEFSVVAIDTEFPGFLWCTPKGISEEEFYHCLRFNVNRLNILQLGLTLADQKGNIAMTWEFNFRDFDHVSDMEDVSSLDSFL

Query:  KNKGFDFYRLKKYGIAQEDFTTLFLPICRSGQIK-RWITFHGFYDIAYLLKLLKIKSIPISMATFAATAQHLLGT-VSDLKHMARYCDGLLDGDLGLKKL
        KN G D  ++++ GI  E+F   F  I      K RW+TF G YD AYLLK L  K +P +   F  T Q LLG  V D+K MA  C G L    GL+++
Subjt:  KNKGFDFYRLKKYGIAQEDFTTLFLPICRSGQIK-RWITFHGFYDIAYLLKLLKIKSIPISMATFAATAQHLLGT-VSDLKHMARYCDGLLDGDLGLKKL

Query:  AKLLDVKRIGTAHFAGSDSLLTASVYIKMKQIFKLPLEQSE
        A +L ++R+G AH AGSDS LTA V+ K+  IF L   + E
Subjt:  AKLLDVKRIGTAHFAGSDSLLTASVYIKMKQIFKLPLEQSE

Q9S9P2 Probable CCR4-associated factor 1 homolog 21.7e-4439.33Show/hide
Query:  REVWSHNLHEELELLNEYLPEFSVVAIDTEFPGFLWCT--------PKGISEEEFYHCLRFNVNRLNILQLGLTLADQKGNI-------AMTWEFNFRDF
        REVW+HNL +E+ L+ + + +F  VA+DTEFPG +  T        P  I  E  Y  L+ NVN L ++QLGLTL+D+KGN+          W+FNFR+F
Subjt:  REVWSHNLHEELELLNEYLPEFSVVAIDTEFPGFLWCT--------PKGISEEEFYHCLRFNVNRLNILQLGLTLADQKGNI-------AMTWEFNFRDF

Query:  DHVSDMEDVSSLDSFLKNKGFDFYRLKKYGIAQEDFTTLFL--PICRSGQIKRWITFHGFYDIAYLLKLLKIKSIPISMATFAATAQHLLGTVSDLKHMA
        + +SDM  + S++  L+    D  +  + G+  + F  L +   +  + +I  W+TFH  YD  YLLKLL  K +P  ++ F    +     V D+K++ 
Subjt:  DHVSDMEDVSSLDSFLKNKGFDFYRLKKYGIAQEDFTTLFL--PICRSGQIKRWITFHGFYDIAYLLKLLKIKSIPISMATFAATAQHLLGTVSDLKHMA

Query:  RYCDGLLDGDLGLKKLAKLLDVKRIGTAHFAGSDSLLTASVYIKMKQIFKL-PLEQSEGFLYGLPYP
         +C  L     GL+K+A+LL VKR+G +H AGSDSLLT   +IKMK+ F    L +  GFL+GL  P
Subjt:  RYCDGLLDGDLGLKKLAKLLDVKRIGTAHFAGSDSLLTASVYIKMKQIFKL-PLEQSEGFLYGLPYP

Q9SAI2 Probable CCR4-associated factor 1 homolog 67.3e-4339.85Show/hide
Query:  REVWSHNLHEELELLNEYLPEFSVVAIDTEFPGFLWCTPKGI---SEEEFYHCLRFNVNRLNILQLGLTLADQKGNIA-------MTWEFNFRDFDHVSD
        REVW+ NL EE++L+ + + +F  VA+DTEFPG +   P G    + +  Y  L+ NVN L ++QLGLT ++++GN+          W+FNFR+FD  SD
Subjt:  REVWSHNLHEELELLNEYLPEFSVVAIDTEFPGFLWCTPKGI---SEEEFYHCLRFNVNRLNILQLGLTLADQKGNIA-------MTWEFNFRDFDHVSD

Query:  MEDVSSLDSFLKNKGFDFYRLKKYGIAQEDFTTLFLPICRSGQI----KRWITFHGFYDIAYLLKLLKIKSIPISMATFAATAQHLLGTVSDLKHMARYC
        +  + S++  LK  G D  +    GI  + F  L +    SG +      W+TFH  YD  YLLKLL  +++P S   F         TV D+KH+ ++C
Subjt:  MEDVSSLDSFLKNKGFDFYRLKKYGIAQEDFTTLFLPICRSGQI----KRWITFHGFYDIAYLLKLLKIKSIPISMATFAATAQHLLGTVSDLKHMARYC

Query:  DGLLDGDLGLKKLAKLLDVKRIGTAHFAGSDSLLTASVYIKMKQIFKL-PLEQSEGFLYGL
        + L     GL KLA+LL+V+R+G  H AGSDSLLT+  + K+K+ F + PL +  G LYGL
Subjt:  DGLLDGDLGLKKLAKLLDVKRIGTAHFAGSDSLLTASVYIKMKQIFKL-PLEQSEGFLYGL

Q9SHJ0 Probable CCR4-associated factor 1 homolog 14.0e-4137.1Show/hide
Query:  REVWSHNLHEELELLNEYLPEFSVVAIDTEFPGFLWCTPKGISEEEFYHCLRFNVNRLNILQLGLTLADQKGNIAMTWEFNFRDFDHVSDMEDVSSLDSF
        R VW  N+ EE+  + E L  F ++A DTE+PG ++ T    S +E Y  ++ NV    ++Q G TL + KG I   WE NF +F   SD  +  S++ F
Subjt:  REVWSHNLHEELELLNEYLPEFSVVAIDTEFPGFLWCTPKGISEEEFYHCLRFNVNRLNILQLGLTLADQKGNIAMTWEFNFRDFDHVSDMEDVSSLDSF

Query:  LKNKGFDFYRLKKYGIAQ--EDFTTLFLPICRSGQIKRWITFHGFYDIAYLLKLLKIKSIPISMATFAATAQHLLGTVSDLKHMARYCDGLLDGDLGLKK
        L+  G D  +++  G+      F    + + RS +   ++TF G YD AY L +L    +P +   FA     + G V D K MA +C+GL +  LGL K
Subjt:  LKNKGFDFYRLKKYGIAQ--EDFTTLFLPICRSGQIKRWITFHGFYDIAYLLKLLKIKSIPISMATFAATAQHLLGTVSDLKHMARYCDGLLDGDLGLKK

Query:  LAKLLDVKRIGTAHFAGSDSLLTASVYIKMKQIFKLPLEQSEGFLYGL
        LA+LL + R+G AH AGSDSL+TA V+IK+K +++     + G +YG+
Subjt:  LAKLLDVKRIGTAHFAGSDSLLTASVYIKMKQIFKLPLEQSEGFLYGL

Q9SKZ2 Probable CCR4-associated factor 1 homolog 77.8e-4540.08Show/hide
Query:  REVWSHNLHEELELLNEYLPEFSVVAIDTEFPGFLWCTPKG---ISEEEFYHCLRFNVNRLNILQLGLTLADQKGNIA--------MTWEFNFRDFDHVS
        REVW+ NL  E+ L+ E + +F  VA+DTEFPG + C P G    + E  Y  L+ NVN L ++QLGLT +D+KGN+           W+FNFR+FD  S
Subjt:  REVWSHNLHEELELLNEYLPEFSVVAIDTEFPGFLWCTPKG---ISEEEFYHCLRFNVNRLNILQLGLTLADQKGNIA--------MTWEFNFRDFDHVS

Query:  DMEDVSSLDSFLKNKGFDFYRLKKYGIAQEDFTTLFLPICRSGQI----KRWITFHGFYDIAYLLKLLKIKSIPISMATFAATAQHLLGTVSDLKHMARY
        D+    S++  L+  G DF +  ++GI  + F  L +    SG +      W+TFH  YD  YLLKLL  +++P +   F          V D+KH+ ++
Subjt:  DMEDVSSLDSFLKNKGFDFYRLKKYGIAQEDFTTLFLPICRSGQI----KRWITFHGFYDIAYLLKLLKIKSIPISMATFAATAQHLLGTVSDLKHMARY

Query:  CDGLLDGDLGLKKLAKLLDVKRIGTAHFAGSDSLLTASVYIKMKQIFKL-PLEQSEGFLYGL
        C+ L     GL KLA+LLDV+R+G  H AGSDSLLT+  + K+++ F +  +E+  G LYGL
Subjt:  CDGLLDGDLGLKKLAKLLDVKRIGTAHFAGSDSLLTASVYIKMKQIFKL-PLEQSEGFLYGL

Arabidopsis top hitse value%identityAlignment
AT1G15920.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.2e-4539.33Show/hide
Query:  REVWSHNLHEELELLNEYLPEFSVVAIDTEFPGFLWCT--------PKGISEEEFYHCLRFNVNRLNILQLGLTLADQKGNI-------AMTWEFNFRDF
        REVW+HNL +E+ L+ + + +F  VA+DTEFPG +  T        P  I  E  Y  L+ NVN L ++QLGLTL+D+KGN+          W+FNFR+F
Subjt:  REVWSHNLHEELELLNEYLPEFSVVAIDTEFPGFLWCT--------PKGISEEEFYHCLRFNVNRLNILQLGLTLADQKGNI-------AMTWEFNFRDF

Query:  DHVSDMEDVSSLDSFLKNKGFDFYRLKKYGIAQEDFTTLFL--PICRSGQIKRWITFHGFYDIAYLLKLLKIKSIPISMATFAATAQHLLGTVSDLKHMA
        + +SDM  + S++  L+    D  +  + G+  + F  L +   +  + +I  W+TFH  YD  YLLKLL  K +P  ++ F    +     V D+K++ 
Subjt:  DHVSDMEDVSSLDSFLKNKGFDFYRLKKYGIAQEDFTTLFL--PICRSGQIKRWITFHGFYDIAYLLKLLKIKSIPISMATFAATAQHLLGTVSDLKHMA

Query:  RYCDGLLDGDLGLKKLAKLLDVKRIGTAHFAGSDSLLTASVYIKMKQIFKL-PLEQSEGFLYGLPYP
         +C  L     GL+K+A+LL VKR+G +H AGSDSLLT   +IKMK+ F    L +  GFL+GL  P
Subjt:  RYCDGLLDGDLGLKKLAKLLDVKRIGTAHFAGSDSLLTASVYIKMKQIFKL-PLEQSEGFLYGLPYP

AT1G15920.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.2e-4539.33Show/hide
Query:  REVWSHNLHEELELLNEYLPEFSVVAIDTEFPGFLWCT--------PKGISEEEFYHCLRFNVNRLNILQLGLTLADQKGNI-------AMTWEFNFRDF
        REVW+HNL +E+ L+ + + +F  VA+DTEFPG +  T        P  I  E  Y  L+ NVN L ++QLGLTL+D+KGN+          W+FNFR+F
Subjt:  REVWSHNLHEELELLNEYLPEFSVVAIDTEFPGFLWCT--------PKGISEEEFYHCLRFNVNRLNILQLGLTLADQKGNI-------AMTWEFNFRDF

Query:  DHVSDMEDVSSLDSFLKNKGFDFYRLKKYGIAQEDFTTLFL--PICRSGQIKRWITFHGFYDIAYLLKLLKIKSIPISMATFAATAQHLLGTVSDLKHMA
        + +SDM  + S++  L+    D  +  + G+  + F  L +   +  + +I  W+TFH  YD  YLLKLL  K +P  ++ F    +     V D+K++ 
Subjt:  DHVSDMEDVSSLDSFLKNKGFDFYRLKKYGIAQEDFTTLFL--PICRSGQIKRWITFHGFYDIAYLLKLLKIKSIPISMATFAATAQHLLGTVSDLKHMA

Query:  RYCDGLLDGDLGLKKLAKLLDVKRIGTAHFAGSDSLLTASVYIKMKQIFKL-PLEQSEGFLYGLPYP
         +C  L     GL+K+A+LL VKR+G +H AGSDSLLT   +IKMK+ F    L +  GFL+GL  P
Subjt:  RYCDGLLDGDLGLKKLAKLLDVKRIGTAHFAGSDSLLTASVYIKMKQIFKL-PLEQSEGFLYGLPYP

AT1G80780.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein5.2e-4439.85Show/hide
Query:  REVWSHNLHEELELLNEYLPEFSVVAIDTEFPGFLWCTPKGI---SEEEFYHCLRFNVNRLNILQLGLTLADQKGNIA-------MTWEFNFRDFDHVSD
        REVW+ NL EE++L+ + + +F  VA+DTEFPG +   P G    + +  Y  L+ NVN L ++QLGLT ++++GN+          W+FNFR+FD  SD
Subjt:  REVWSHNLHEELELLNEYLPEFSVVAIDTEFPGFLWCTPKGI---SEEEFYHCLRFNVNRLNILQLGLTLADQKGNIA-------MTWEFNFRDFDHVSD

Query:  MEDVSSLDSFLKNKGFDFYRLKKYGIAQEDFTTLFLPICRSGQI----KRWITFHGFYDIAYLLKLLKIKSIPISMATFAATAQHLLGTVSDLKHMARYC
        +  + S++  LK  G D  +    GI  + F  L +    SG +      W+TFH  YD  YLLKLL  +++P S   F         TV D+KH+ ++C
Subjt:  MEDVSSLDSFLKNKGFDFYRLKKYGIAQEDFTTLFLPICRSGQI----KRWITFHGFYDIAYLLKLLKIKSIPISMATFAATAQHLLGTVSDLKHMARYC

Query:  DGLLDGDLGLKKLAKLLDVKRIGTAHFAGSDSLLTASVYIKMKQIFKL-PLEQSEGFLYGL
        + L     GL KLA+LL+V+R+G  H AGSDSLLT+  + K+K+ F + PL +  G LYGL
Subjt:  DGLLDGDLGLKKLAKLLDVKRIGTAHFAGSDSLLTASVYIKMKQIFKL-PLEQSEGFLYGL

AT1G80780.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein5.2e-4439.85Show/hide
Query:  REVWSHNLHEELELLNEYLPEFSVVAIDTEFPGFLWCTPKGI---SEEEFYHCLRFNVNRLNILQLGLTLADQKGNIA-------MTWEFNFRDFDHVSD
        REVW+ NL EE++L+ + + +F  VA+DTEFPG +   P G    + +  Y  L+ NVN L ++QLGLT ++++GN+          W+FNFR+FD  SD
Subjt:  REVWSHNLHEELELLNEYLPEFSVVAIDTEFPGFLWCTPKGI---SEEEFYHCLRFNVNRLNILQLGLTLADQKGNIA-------MTWEFNFRDFDHVSD

Query:  MEDVSSLDSFLKNKGFDFYRLKKYGIAQEDFTTLFLPICRSGQI----KRWITFHGFYDIAYLLKLLKIKSIPISMATFAATAQHLLGTVSDLKHMARYC
        +  + S++  LK  G D  +    GI  + F  L +    SG +      W+TFH  YD  YLLKLL  +++P S   F         TV D+KH+ ++C
Subjt:  MEDVSSLDSFLKNKGFDFYRLKKYGIAQEDFTTLFLPICRSGQI----KRWITFHGFYDIAYLLKLLKIKSIPISMATFAATAQHLLGTVSDLKHMARYC

Query:  DGLLDGDLGLKKLAKLLDVKRIGTAHFAGSDSLLTASVYIKMKQIFKL-PLEQSEGFLYGL
        + L     GL KLA+LL+V+R+G  H AGSDSLLT+  + K+K+ F + PL +  G LYGL
Subjt:  DGLLDGDLGLKKLAKLLDVKRIGTAHFAGSDSLLTASVYIKMKQIFKL-PLEQSEGFLYGL

AT2G32070.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein5.5e-4640.08Show/hide
Query:  REVWSHNLHEELELLNEYLPEFSVVAIDTEFPGFLWCTPKG---ISEEEFYHCLRFNVNRLNILQLGLTLADQKGNIA--------MTWEFNFRDFDHVS
        REVW+ NL  E+ L+ E + +F  VA+DTEFPG + C P G    + E  Y  L+ NVN L ++QLGLT +D+KGN+           W+FNFR+FD  S
Subjt:  REVWSHNLHEELELLNEYLPEFSVVAIDTEFPGFLWCTPKG---ISEEEFYHCLRFNVNRLNILQLGLTLADQKGNIA--------MTWEFNFRDFDHVS

Query:  DMEDVSSLDSFLKNKGFDFYRLKKYGIAQEDFTTLFLPICRSGQI----KRWITFHGFYDIAYLLKLLKIKSIPISMATFAATAQHLLGTVSDLKHMARY
        D+    S++  L+  G DF +  ++GI  + F  L +    SG +      W+TFH  YD  YLLKLL  +++P +   F          V D+KH+ ++
Subjt:  DMEDVSSLDSFLKNKGFDFYRLKKYGIAQEDFTTLFLPICRSGQI----KRWITFHGFYDIAYLLKLLKIKSIPISMATFAATAQHLLGTVSDLKHMARY

Query:  CDGLLDGDLGLKKLAKLLDVKRIGTAHFAGSDSLLTASVYIKMKQIFKL-PLEQSEGFLYGL
        C+ L     GL KLA+LLDV+R+G  H AGSDSLLT+  + K+++ F +  +E+  G LYGL
Subjt:  CDGLLDGDLGLKKLAKLLDVKRIGTAHFAGSDSLLTASVYIKMKQIFKL-PLEQSEGFLYGL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGAAATGAATAGAAAAATTCCACATCAACACAATGGCAATACATTTAGAGTGATGATGTCCCCGAAAAACATGGAGAAAGAGATAGTTGGAAAGTCAACAACAGC
TCCAAGATCCATCCGCCATAATCGAGAGGTTTGGTCTCACAATCTCCATGAAGAGTTAGAGCTGCTGAATGAGTATCTTCCAGAGTTTTCAGTAGTCGCCATCGATACGG
AGTTTCCAGGATTTCTGTGGTGCACTCCGAAAGGCATCTCGGAGGAAGAATTCTACCATTGTCTCCGATTCAATGTGAACCGATTGAACATACTCCAACTCGGTCTCACA
CTCGCCGATCAGAAGGGAAATATAGCGATGACTTGGGAGTTTAATTTCAGAGATTTTGATCACGTTAGCGATATGGAAGACGTTTCTTCGCTCGATTCATTTCTGAAGAA
CAAGGGGTTTGATTTCTACAGATTGAAGAAATACGGAATAGCTCAAGAGGACTTCACTACCTTGTTTCTACCGATATGTCGTAGTGGTCAAATCAAGAGATGGATCACAT
TTCACGGCTTCTACGACATCGCTTATCTTCTCAAGCTGCTCAAAATCAAATCCATACCGATTTCCATGGCAACATTTGCTGCCACCGCTCAACATCTATTAGGTACGGTT
AGCGATCTGAAGCATATGGCTCGCTACTGTGATGGACTGCTTGACGGCGACCTAGGGCTCAAAAAATTGGCCAAGCTGCTCGACGTGAAGCGTATAGGCACTGCACATTT
TGCCGGTTCCGATAGTTTACTCACAGCTTCAGTATACATCAAGATGAAGCAAATTTTCAAGCTTCCGCTAGAGCAATCCGAAGGGTTTCTCTATGGCTTGCCTTATCCGA
TTAAGGGTTTTCGGTCAGTCGTGAAGATTATCGATACATCCACCATGACTCCTCCTCCACCACTACCATCAAAGTTCTCAATGTTGTCTTTTCGCAGCTCTCCGCCGCTT
TTGGTTGATATTAAGTCTAGCAAGTTAAATATTGGTCATTCAGTCGTAGTTGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTGAAATGAATAGAAAAATTCCACATCAACACAATGGCAATACATTTAGAGTGATGATGTCCCCGAAAAACATGGAGAAAGAGATAGTTGGAAAGTCAACAACAGC
TCCAAGATCCATCCGCCATAATCGAGAGGTTTGGTCTCACAATCTCCATGAAGAGTTAGAGCTGCTGAATGAGTATCTTCCAGAGTTTTCAGTAGTCGCCATCGATACGG
AGTTTCCAGGATTTCTGTGGTGCACTCCGAAAGGCATCTCGGAGGAAGAATTCTACCATTGTCTCCGATTCAATGTGAACCGATTGAACATACTCCAACTCGGTCTCACA
CTCGCCGATCAGAAGGGAAATATAGCGATGACTTGGGAGTTTAATTTCAGAGATTTTGATCACGTTAGCGATATGGAAGACGTTTCTTCGCTCGATTCATTTCTGAAGAA
CAAGGGGTTTGATTTCTACAGATTGAAGAAATACGGAATAGCTCAAGAGGACTTCACTACCTTGTTTCTACCGATATGTCGTAGTGGTCAAATCAAGAGATGGATCACAT
TTCACGGCTTCTACGACATCGCTTATCTTCTCAAGCTGCTCAAAATCAAATCCATACCGATTTCCATGGCAACATTTGCTGCCACCGCTCAACATCTATTAGGTACGGTT
AGCGATCTGAAGCATATGGCTCGCTACTGTGATGGACTGCTTGACGGCGACCTAGGGCTCAAAAAATTGGCCAAGCTGCTCGACGTGAAGCGTATAGGCACTGCACATTT
TGCCGGTTCCGATAGTTTACTCACAGCTTCAGTATACATCAAGATGAAGCAAATTTTCAAGCTTCCGCTAGAGCAATCCGAAGGGTTTCTCTATGGCTTGCCTTATCCGA
TTAAGGGTTTTCGGTCAGTCGTGAAGATTATCGATACATCCACCATGACTCCTCCTCCACCACTACCATCAAAGTTCTCAATGTTGTCTTTTCGCAGCTCTCCGCCGCTT
TTGGTTGATATTAAGTCTAGCAAGTTAAATATTGGTCATTCAGTCGTAGTTGGTTGA
Protein sequenceShow/hide protein sequence
MGEMNRKIPHQHNGNTFRVMMSPKNMEKEIVGKSTTAPRSIRHNREVWSHNLHEELELLNEYLPEFSVVAIDTEFPGFLWCTPKGISEEEFYHCLRFNVNRLNILQLGLT
LADQKGNIAMTWEFNFRDFDHVSDMEDVSSLDSFLKNKGFDFYRLKKYGIAQEDFTTLFLPICRSGQIKRWITFHGFYDIAYLLKLLKIKSIPISMATFAATAQHLLGTV
SDLKHMARYCDGLLDGDLGLKKLAKLLDVKRIGTAHFAGSDSLLTASVYIKMKQIFKLPLEQSEGFLYGLPYPIKGFRSVVKIIDTSTMTPPPPLPSKFSMLSFRSSPPL
LVDIKSSKLNIGHSVVVG