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Moc04g30460 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g30460
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionGeranylgeranyl pyrophosphate synthase
Genome locationchr4:22796121..22800892
RNA-Seq ExpressionMoc04g30460
SyntenyMoc04g30460
Gene Ontology termsGO:0006468 - protein phosphorylation (biological process)
GO:0008299 - isoprenoid biosynthetic process (biological process)
GO:0004659 - prenyltransferase activity (molecular function)
GO:0004672 - protein kinase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
InterPro domainsIPR008949 - Isoprenoid synthase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7831093.1 geranylgeranyl pyrophosphate synthase 7, chloroplastic-like [Senna tora]6.0e-1262.9Show/hide
Query:  MCQVVDDIVGLTKSAEELGKTPKKDLGCDKAIYPKLLGIEGAKRCVEELMEKAVEDLSSFDA
        M QVVDDI+  TKS+EELGK+  KDL  DKA YPKL+G++GAK+   EL+EKA+ +LS FDA
Subjt:  MCQVVDDIVGLTKSAEELGKTPKKDLGCDKAIYPKLLGIEGAKRCVEELMEKAVEDLSSFDA

RXH90582.1 hypothetical protein DVH24_035346 [Malus domestica]6.0e-1263.93Show/hide
Query:  QVVDDIVGLTKSAEELGKTPKKDLGCDKAIYPKLLGIEGAKRCVEELMEKAVEDLSSFDAS
        QVVDDI+ +TKS+EELGKT  KDL  DKA YPKL+GIEGAK    EL+ +AV++L+ FDA+
Subjt:  QVVDDIVGLTKSAEELGKTPKKDLGCDKAIYPKLLGIEGAKRCVEELMEKAVEDLSSFDAS

XP_008381504.2 geranylgeranyl pyrophosphate synthase 7, chloroplastic-like [Malus domestica]6.0e-1263.93Show/hide
Query:  QVVDDIVGLTKSAEELGKTPKKDLGCDKAIYPKLLGIEGAKRCVEELMEKAVEDLSSFDAS
        QVVDDI+ +TKS+EELGKT  KDL  DKA YPKL+GIEGAK    EL+ +AV++L+ FDA+
Subjt:  QVVDDIVGLTKSAEELGKTPKKDLGCDKAIYPKLLGIEGAKRCVEELMEKAVEDLSSFDAS

XP_009370114.1 PREDICTED: geranylgeranyl pyrophosphate synthase 7, chloroplastic-like [Pyrus x bretschneideri]6.0e-1263.93Show/hide
Query:  QVVDDIVGLTKSAEELGKTPKKDLGCDKAIYPKLLGIEGAKRCVEELMEKAVEDLSSFDAS
        QVVDDI+ +TKS+EELGKT  KDL  DKA YPKL+GIEGAK    EL+ +AV++L+ FDA+
Subjt:  QVVDDIVGLTKSAEELGKTPKKDLGCDKAIYPKLLGIEGAKRCVEELMEKAVEDLSSFDAS

XP_034209966.1 geranylgeranyl pyrophosphate synthase 7, chloroplastic-like [Prunus dulcis]6.0e-1261.29Show/hide
Query:  QVVDDIVGLTKSAEELGKTPKKDLGCDKAIYPKLLGIEGAKRCVEELMEKAVEDLSSFDASI
        QVVDDI+ +TKS+EELGKT  KDL  DKA YPKL+GIEGAK    +L+ +A+E+L+ FDA++
Subjt:  QVVDDIVGLTKSAEELGKTPKKDLGCDKAIYPKLLGIEGAKRCVEELMEKAVEDLSSFDASI

TrEMBL top hitse value%identityAlignment
A0A059BSY6 Uncharacterized protein3.8e-1265.57Show/hide
Query:  QVVDDIVGLTKSAEELGKTPKKDLGCDKAIYPKLLGIEGAKRCVEELMEKAVEDLSSFDAS
        QVVDDI+ +TKS EELGKT  KDL  DKA YPKL+GIE AK    EL+EKA+E L  FDA+
Subjt:  QVVDDIVGLTKSAEELGKTPKKDLGCDKAIYPKLLGIEGAKRCVEELMEKAVEDLSSFDAS

A0A314YKH0 Geranylgeranyl pyrophosphate synthase 7 chloroplastic8.5e-1262.3Show/hide
Query:  QVVDDIVGLTKSAEELGKTPKKDLGCDKAIYPKLLGIEGAKRCVEELMEKAVEDLSSFDAS
        QVVDDI+ +TKS+EELGKT  KDL  DKA YPKL+GIEGAK    +L  +A+E+L+ FDA+
Subjt:  QVVDDIVGLTKSAEELGKTPKKDLGCDKAIYPKLLGIEGAKRCVEELMEKAVEDLSSFDAS

A0A498J9R1 Uncharacterized protein2.9e-1263.93Show/hide
Query:  QVVDDIVGLTKSAEELGKTPKKDLGCDKAIYPKLLGIEGAKRCVEELMEKAVEDLSSFDAS
        QVVDDI+ +TKS+EELGKT  KDL  DKA YPKL+GIEGAK    EL+ +AV++L+ FDA+
Subjt:  QVVDDIVGLTKSAEELGKTPKKDLGCDKAIYPKLLGIEGAKRCVEELMEKAVEDLSSFDAS

A0A5E4FQT1 PREDICTED: geranylgeranyl2.9e-1261.29Show/hide
Query:  QVVDDIVGLTKSAEELGKTPKKDLGCDKAIYPKLLGIEGAKRCVEELMEKAVEDLSSFDASI
        QVVDDI+ +TKS+EELGKT  KDL  DKA YPKL+GIEGAK    +L+ +A+E+L+ FDA++
Subjt:  QVVDDIVGLTKSAEELGKTPKKDLGCDKAIYPKLLGIEGAKRCVEELMEKAVEDLSSFDASI

M5XET4 Uncharacterized protein8.5e-1259.68Show/hide
Query:  QVVDDIVGLTKSAEELGKTPKKDLGCDKAIYPKLLGIEGAKRCVEELMEKAVEDLSSFDASI
        QVVDDI+ +TKS+EELGKT  KDL  DKA YPK +GIEGAK    +L+ +A+E+L+ FDA++
Subjt:  QVVDDIVGLTKSAEELGKTPKKDLGCDKAIYPKLLGIEGAKRCVEELMEKAVEDLSSFDASI

SwissProt top hitse value%identityAlignment
A0A0U3BRC5 Geranylfarnesyl diphosphate synthase, chloroplastic9.0e-1155.93Show/hide
Query:  QVVDDIVGLTKSAEELGKTPKKDLGCDKAIYPKLLGIEGAKRCVEELMEKAVEDLSSFD
        QVVDDI+ +TKS+EELGKT  KDL   K  YPKLLG+E ++   E+L  +A E L  FD
Subjt:  QVVDDIVGLTKSAEELGKTPKKDLGCDKAIYPKLLGIEGAKRCVEELMEKAVEDLSSFD

P80042 Geranylgeranyl pyrophosphate synthase, chloroplastic1.8e-1158.33Show/hide
Query:  QVVDDIVGLTKSAEELGKTPKKDLGCDKAIYPKLLGIEGAKRCVEELMEKAVEDLSSFDA
        QVVDDI+ +TKS+EELGKT  KDL  DK  YPKLLG+E AK    EL  +A + L  FD+
Subjt:  QVVDDIVGLTKSAEELGKTPKKDLGCDKAIYPKLLGIEGAKRCVEELMEKAVEDLSSFDA

Q42698 Geranylgeranyl pyrophosphate synthase, chloroplastic5.3e-1155.93Show/hide
Query:  QVVDDIVGLTKSAEELGKTPKKDLGCDKAIYPKLLGIEGAKRCVEELMEKAVEDLSSFD
        QVVDDI+ +TKS++ELGKT  KDL  DK  YPKLLGI+ ++   E+L  +A E L+ FD
Subjt:  QVVDDIVGLTKSAEELGKTPKKDLGCDKAIYPKLLGIEGAKRCVEELMEKAVEDLSSFD

Q94ID7 Geranylgeranyl pyrophosphate synthase, chloroplastic1.8e-1157.63Show/hide
Query:  QVVDDIVGLTKSAEELGKTPKKDLGCDKAIYPKLLGIEGAKRCVEELMEKAVEDLSSFD
        QVVDDI+ +TKS++ELGKT  KDL  DK  YPKLLGIE ++   E+L ++A E L+ FD
Subjt:  QVVDDIVGLTKSAEELGKTPKKDLGCDKAIYPKLLGIEGAKRCVEELMEKAVEDLSSFD

Q9ZU77 Geranylgeranyl pyrophosphate synthase 7, chloroplastic3.1e-1155.74Show/hide
Query:  QVVDDIVGLTKSAEELGKTPKKDLGCDKAIYPKLLGIEGAKRCVEELMEKAVEDLSSFDAS
        QVVDDI+ +TKS+EELGKT  KDL  DK  YPKL+G+E +K   ++L+  A E L  FD+S
Subjt:  QVVDDIVGLTKSAEELGKTPKKDLGCDKAIYPKLLGIEGAKRCVEELMEKAVEDLSSFDAS

Arabidopsis top hitse value%identityAlignment
AT2G18620.1 Terpenoid synthases superfamily protein2.2e-1255.74Show/hide
Query:  QVVDDIVGLTKSAEELGKTPKKDLGCDKAIYPKLLGIEGAKRCVEELMEKAVEDLSSFDAS
        QVVDDI+ +TKS+EELGKT  KDL  DK  YPKL+G+E +K   ++L+  A E L  FD+S
Subjt:  QVVDDIVGLTKSAEELGKTPKKDLGCDKAIYPKLLGIEGAKRCVEELMEKAVEDLSSFDAS

AT3G14530.1 Terpenoid synthases superfamily protein8.4e-1252.46Show/hide
Query:  QVVDDIVGLTKSAEELGKTPKKDLGCDKAIYPKLLGIEGAKRCVEELMEKAVEDLSSFDAS
        QVVDDI+ +TKS EELGKT  KD+   K  YP+L+G+EG++   E+L  +A E L  FD S
Subjt:  QVVDDIVGLTKSAEELGKTPKKDLGCDKAIYPKLLGIEGAKRCVEELMEKAVEDLSSFDAS

AT3G14550.1 geranylgeranyl pyrophosphate synthase 33.2e-1152.46Show/hide
Query:  QVVDDIVGLTKSAEELGKTPKKDLGCDKAIYPKLLGIEGAKRCVEELMEKAVEDLSSFDAS
        QVVDDI+ +TKS EELGKT  KD+   K  YP+L+G+E +K   E+L  +A E L  FD S
Subjt:  QVVDDIVGLTKSAEELGKTPKKDLGCDKAIYPKLLGIEGAKRCVEELMEKAVEDLSSFDAS

AT3G32040.1 Terpenoid synthases superfamily protein1.2e-1047.54Show/hide
Query:  QVVDDIVGLTKSAEELGKTPKKDLGCDKAIYPKLLGIEGAKRCVEELMEKAVEDLSSFDAS
        QVVDDI+ +T+S EELGKT  KD+   K  YP+L+G+E ++   E+L  +A E L  FD++
Subjt:  QVVDDIVGLTKSAEELGKTPKKDLGCDKAIYPKLLGIEGAKRCVEELMEKAVEDLSSFDAS

AT4G36810.1 geranylgeranyl pyrophosphate synthase 19.3e-1150Show/hide
Query:  QVVDDIVGLTKSAEELGKTPKKDLGCDKAIYPKLLGIEGAKRCVEELMEKAVEDLSSFDA
        QVVDDI+ +TKS++ELGKT  KDL  DK  YPK++G+E ++   E+L  +A + L  FD+
Subjt:  QVVDDIVGLTKSAEELGKTPKKDLGCDKAIYPKLLGIEGAKRCVEELMEKAVEDLSSFDA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTCAAGTGGTAGATGATATTGTGGGATTAACTAAGTCAGCAGAGGAGCTGGGGAAAACACCAAAGAAGGATTTGGGTTGTGATAAAGCTATATATCCCAAGCTTTT
GGGGATTGAAGGAGCTAAGAGATGTGTGGAGGAGTTGATGGAGAAGGCCGTGGAGGATCTTTCTTCCTTTGATGCATCTATAGAGTGGCACAATTTTGGGGATGGTCCCT
CCCCGGTGAGCGATGGTCCTGAAACCGATGTTGACGTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGTCAAGTGGTAGATGATATTGTGGGATTAACTAAGTCAGCAGAGGAGCTGGGGAAAACACCAAAGAAGGATTTGGGTTGTGATAAAGCTATATATCCCAAGCTTTT
GGGGATTGAAGGAGCTAAGAGATGTGTGGAGGAGTTGATGGAGAAGGCCGTGGAGGATCTTTCTTCCTTTGATGCATCTATAGAGTGGCACAATTTTGGGGATGGTCCCT
CCCCGGTGAGCGATGGTCCTGAAACCGATGTTGACGTCTGA
Protein sequenceShow/hide protein sequence
MCQVVDDIVGLTKSAEELGKTPKKDLGCDKAIYPKLLGIEGAKRCVEELMEKAVEDLSSFDASIEWHNFGDGPSPVSDGPETDVDV