; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc04g31230 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g31230
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionUnknown protein
Genome locationchr4:23443675..23443929
RNA-Seq ExpressionMoc04g31230
SyntenyMoc04g31230
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022155289.1 uncharacterized protein LOC111022426 [Momordica charantia]1.2e-0949.33Show/hide
Query:  MKIRSDASIVGNISGIGVLIWNDKNEIQAALVDLHTVASPLLAEILVIRKGLHLASRLGLRKVEVESDSVMTIRL
        +K+ +DA++    SG+GVL+ +   EI AA++D H V +PLL EIL IR+GL LA+RLG+ +V VESDS+  + L
Subjt:  MKIRSDASIVGNISGIGVLIWNDKNEIQAALVDLHTVASPLLAEILVIRKGLHLASRLGLRKVEVESDSVMTIRL
XP_022158489.1 uncharacterized protein LOC111024968 [Momordica charantia]2.7e-0948.05Show/hide
Query:  GAMKIRSDASIVGNISGIGVLIWNDKNEIQAALVDLHTVASPLLAEILVIRKGLHLASRLGLRKVEVESDSVMTIRL
        G +K+ +DA++    SG+GVL+     EI  A+VD H V +PLLA+IL IR+GL LA+RLG+ +V VE+DS+  + L
Subjt:  GAMKIRSDASIVGNISGIGVLIWNDKNEIQAALVDLHTVASPLLAEILVIRKGLHLASRLGLRKVEVESDSVMTIRL
TrEMBL top hitse value%identityAlignment
A0A6J1DPU1 uncharacterized protein LOC1110224265.9e-1049.33Show/hide
Query:  MKIRSDASIVGNISGIGVLIWNDKNEIQAALVDLHTVASPLLAEILVIRKGLHLASRLGLRKVEVESDSVMTIRL
        +K+ +DA++    SG+GVL+ +   EI AA++D H V +PLL EIL IR+GL LA+RLG+ +V VESDS+  + L
Subjt:  MKIRSDASIVGNISGIGVLIWNDKNEIQAALVDLHTVASPLLAEILVIRKGLHLASRLGLRKVEVESDSVMTIRL
A0A6J1DZK3 uncharacterized protein LOC1110249681.3e-0948.05Show/hide
Query:  GAMKIRSDASIVGNISGIGVLIWNDKNEIQAALVDLHTVASPLLAEILVIRKGLHLASRLGLRKVEVESDSVMTIRL
        G +K+ +DA++    SG+GVL+     EI  A+VD H V +PLLA+IL IR+GL LA+RLG+ +V VE+DS+  + L
Subjt:  GAMKIRSDASIVGNISGIGVLIWNDKNEIQAALVDLHTVASPLLAEILVIRKGLHLASRLGLRKVEVESDSVMTIRL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGCTATGAAGATTCGCTCAGATGCTTCGATTGTGGGGAACATATCTGGAATTGGGGTGCTGATATGGAATGATAAGAATGAAATTCAGGCGGCCCTGGTCGATTT
GCACACGGTGGCTTCTCCTCTATTAGCTGAAATCTTGGTGATTAGGAAGGGGTTGCATTTGGCGAGTCGCCTAGGGCTGAGAAAGGTGGAGGTCGAATCAGATTCAGTGA
TGACCATTCGTTTGTGCTCTAATGCGACTGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTGCTATGAAGATTCGCTCAGATGCTTCGATTGTGGGGAACATATCTGGAATTGGGGTGCTGATATGGAATGATAAGAATGAAATTCAGGCGGCCCTGGTCGATTT
GCACACGGTGGCTTCTCCTCTATTAGCTGAAATCTTGGTGATTAGGAAGGGGTTGCATTTGGCGAGTCGCCTAGGGCTGAGAAAGGTGGAGGTCGAATCAGATTCAGTGA
TGACCATTCGTTTGTGCTCTAATGCGACTGTTTGA
Protein sequenceShow/hide protein sequence
MGAMKIRSDASIVGNISGIGVLIWNDKNEIQAALVDLHTVASPLLAEILVIRKGLHLASRLGLRKVEVESDSVMTIRLCSNATV