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Moc04g32030 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g32030
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptionprotein MKS1-like
Genome locationchr4:24035721..24036284
RNA-Seq ExpressionMoc04g32030
SyntenyMoc04g32030
Gene Ontology termsGO:0005634 - nucleus (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7834171.1 protein MKS1 [Senna tora]4.5e-1241.18Show/hide
Query:  SPPRRKEIPLNGPRPAALSVAKDSLKIKKPPLPPS---RALQLRHHHQQRRQP-PLVIYELSPQVKNVPAADFMAYVQQQTGYHPS------AAAAASTS
        +PP  +E+ L GPRP+ LSV+KDS KI+KPPLPP     A   R H QQ+  P PL+IY +SP+  NVP  DFM  VQ+ TG   S       + AA  +
Subjt:  SPPRRKEIPLNGPRPAALSVAKDSLKIKKPPLPPS---RALQLRHHHQQRRQP-PLVIYELSPQVKNVPAADFMAYVQQQTGYHPS------AAAAASTS

Query:  SVDVTEPEPTTAPHSPP----------------GILSPTPTSLPSISPNIFTP
        S++ T P       S                  GILSP P +LP+IS ++F+P
Subjt:  SVDVTEPEPTTAPHSPP----------------GILSPTPTSLPSISPNIFTP

XP_006854610.1 protein MKS1 [Amborella trichopoda]1.3e-1143.84Show/hide
Query:  GSPPRRKEIPLNGPRPAALSVAKDSLKIKKPP--LPPSRALQLRHHHQQRRQPPLVIYELSPQVKNVPAADFMAYVQQQTGYHPSAAAAASTS-------
        G PPR++   L GPRPA L V KDS KIKKPP  LPP  +L L H  Q R  PP++IY +SP+V +  A+DFM  VQ  TG   S+   +  +       
Subjt:  GSPPRRKEIPLNGPRPAALSVAKDSLKIKKPP--LPPSRALQLRHHHQQRRQPPLVIYELSPQVKNVPAADFMAYVQQQTGYHPSAAAAASTS-------

Query:  ------SVDVTEPEPTTAPHS-PPGILSPTPTSLPSISPNIFTPTP
              S  +   E    P S   GILSP P+SLP ISP+ F P+P
Subjt:  ------SVDVTEPEPTTAPHS-PPGILSPTPTSLPSISPNIFTPTP

XP_022141658.1 protein MKS1-like [Momordica charantia]1.8e-98100Show/hide
Query:  MGSPPRRKEIPLNGPRPAALSVAKDSLKIKKPPLPPSRALQLRHHHQQRRQPPLVIYELSPQVKNVPAADFMAYVQQQTGYHPSAAAAASTSSVDVTEPE
        MGSPPRRKEIPLNGPRPAALSVAKDSLKIKKPPLPPSRALQLRHHHQQRRQPPLVIYELSPQVKNVPAADFMAYVQQQTGYHPSAAAAASTSSVDVTEPE
Subjt:  MGSPPRRKEIPLNGPRPAALSVAKDSLKIKKPPLPPSRALQLRHHHQQRRQPPLVIYELSPQVKNVPAADFMAYVQQQTGYHPSAAAAASTSSVDVTEPE

Query:  PTTAPHSPPGILSPTPTSLPSISPNIFTPTPTPPPPPPDDVISYTWRTVEPPPLPTFNQNPVHLPYGLPNFSPQDFFHDNSFPDNFP
        PTTAPHSPPGILSPTPTSLPSISPNIFTPTPTPPPPPPDDVISYTWRTVEPPPLPTFNQNPVHLPYGLPNFSPQDFFHDNSFPDNFP
Subjt:  PTTAPHSPPGILSPTPTSLPSISPNIFTPTPTPPPPPPDDVISYTWRTVEPPPLPTFNQNPVHLPYGLPNFSPQDFFHDNSFPDNFP

XP_027336856.1 protein MKS1-like [Abrus precatorius]5.0e-1138.36Show/hide
Query:  GSPPRRKEIPLNGPRPAALSVAKDSLKIKKPPLPPSRALQLRHHH---QQRRQPPLVIYELSPQVKNVPAADFMAYVQQQTGY---HPSA-----AAAAS
        G+PP +KE+ + GPRP  L V+K S KIKKPPLPP     + HHH   +Q+++ P++IY +SP+V +V   DFM  VQ+ TG     PSA     + AA 
Subjt:  GSPPRRKEIPLNGPRPAALSVAKDSLKIKKPPLPPSRALQLRHHH---QQRRQPPLVIYELSPQVKNVPAADFMAYVQQQTGY---HPSA-----AAAAS

Query:  TSSVDVTEPEPTTAPH--------------------SPPGILSPTPTSLPSISPNIFTP
         +S++ T P                             PGILSP P +LP I P +F+P
Subjt:  TSSVDVTEPEPTTAPH--------------------SPPGILSPTPTSLPSISPNIFTP

XP_028766054.1 protein MKS1 [Prosopis alba]3.8e-1140.38Show/hide
Query:  PPRRKEIPLNGPRPAALSVAKDSLKIKKPPLPP----SRALQLRHHHQQRRQPPLVIYELSPQVKNVPAADFMAYVQQQTG-YHPSA-----AAAASTSS
        PP R+E+ L GPRP+ LSV+K+S KI+KPPLPP      A   RH  QQ +  P++IY +SP+V +VP  DFM  VQ+ TG   PS+     + AA  +S
Subjt:  PPRRKEIPLNGPRPAALSVAKDSLKIKKPPLPP----SRALQLRHHHQQRRQPPLVIYELSPQVKNVPAADFMAYVQQQTG-YHPSA-----AAAASTSS

Query:  VDVTEPEPTTAPHSPP----------------GILSPTPTSLPSISPNIFTPTPTP
        ++ T P       +                  GILSP P S+P IS  IF+P   P
Subjt:  VDVTEPEPTTAPHSPP----------------GILSPTPTSLPSISPNIFTPTPTP

TrEMBL top hitse value%identityAlignment
A0A1U7ZGJ3 protein MKS15.9e-1038.15Show/hide
Query:  GSPPRRKEIPLNGPRPAALSVAKDSLKIKKPPLPPSRALQLRHHHQQRRQPPLVIYELSPQVKNVPAADFMAYVQQQTGYHPS------AAAAASTSSVD
        G P  R+E  L GPRP  L V+KDS KIKKPP+PP  +   +   Q R  PP++IY +SP+V +  A++FM  VQ+ TG  P+      A A AS+S+ D
Subjt:  GSPPRRKEIPLNGPRPAALSVAKDSLKIKKPPLPPSRALQLRHHHQQRRQPPLVIYELSPQVKNVPAADFMAYVQQQTGYHPS------AAAAASTSSVD

Query:  VT-----------EPEPTTAP------------------------HSPPGILSPTPTSLPSISPNIFTPTPTP
         T             +  T+P                         S PGILSP P+SLP ISPN F+P   P
Subjt:  VT-----------EPEPTTAP------------------------HSPPGILSPTPTSLPSISPNIFTPTPTP

A0A445JEU9 Protein MKS11.0e-0941.18Show/hide
Query:  SPPRRKEIPLNGPRPAALSVAKDSLKIKKPPLPPSRALQLRHHHQQRRQP----PLVIYELSPQVKNVPAADFMAYVQQQTGYHPSA---AAAASTSSVD
        SPP +KE+ L G RP  L V+KDS KI+KPPLPP+        HQ    P    P++IY +SP+V +VPA DFM  VQ+ TG  PS+   + AA  +S++
Subjt:  SPPRRKEIPLNGPRPAALSVAKDSLKIKKPPLPPSRALQLRHHHQQRRQP----PLVIYELSPQVKNVPAADFMAYVQQQTGYHPSA---AAAASTSSVD

Query:  VTEPEPTTAPHSP----------------PGILSPTPTSLPSISPNIFTPTPT
         T P      HS                 PGILS  P +LP ISP  F+   T
Subjt:  VTEPEPTTAPHSP----------------PGILSPTPTSLPSISPNIFTPTPT

A0A6J1CL52 protein MKS1-like8.9e-99100Show/hide
Query:  MGSPPRRKEIPLNGPRPAALSVAKDSLKIKKPPLPPSRALQLRHHHQQRRQPPLVIYELSPQVKNVPAADFMAYVQQQTGYHPSAAAAASTSSVDVTEPE
        MGSPPRRKEIPLNGPRPAALSVAKDSLKIKKPPLPPSRALQLRHHHQQRRQPPLVIYELSPQVKNVPAADFMAYVQQQTGYHPSAAAAASTSSVDVTEPE
Subjt:  MGSPPRRKEIPLNGPRPAALSVAKDSLKIKKPPLPPSRALQLRHHHQQRRQPPLVIYELSPQVKNVPAADFMAYVQQQTGYHPSAAAAASTSSVDVTEPE

Query:  PTTAPHSPPGILSPTPTSLPSISPNIFTPTPTPPPPPPDDVISYTWRTVEPPPLPTFNQNPVHLPYGLPNFSPQDFFHDNSFPDNFP
        PTTAPHSPPGILSPTPTSLPSISPNIFTPTPTPPPPPPDDVISYTWRTVEPPPLPTFNQNPVHLPYGLPNFSPQDFFHDNSFPDNFP
Subjt:  PTTAPHSPPGILSPTPTSLPSISPNIFTPTPTPPPPPPDDVISYTWRTVEPPPLPTFNQNPVHLPYGLPNFSPQDFFHDNSFPDNFP

I1KTG3 VQ domain-containing protein1.0e-0941.18Show/hide
Query:  SPPRRKEIPLNGPRPAALSVAKDSLKIKKPPLPPSRALQLRHHHQQRRQP----PLVIYELSPQVKNVPAADFMAYVQQQTGYHPSA---AAAASTSSVD
        SPP +KE+ L G RP  L V+KDS KI+KPPLPP+        HQ    P    P++IY +SP+V +VPA DFM  VQ+ TG  PS+   + AA  +S++
Subjt:  SPPRRKEIPLNGPRPAALSVAKDSLKIKKPPLPPSRALQLRHHHQQRRQP----PLVIYELSPQVKNVPAADFMAYVQQQTGYHPSA---AAAASTSSVD

Query:  VTEPEPTTAPHSP----------------PGILSPTPTSLPSISPNIFTPTPT
         T P      HS                 PGILS  P +LP ISP  F+   T
Subjt:  VTEPEPTTAPHSP----------------PGILSPTPTSLPSISPNIFTPTPT

U5D3U9 VQ domain-containing protein6.3e-1243.84Show/hide
Query:  GSPPRRKEIPLNGPRPAALSVAKDSLKIKKPP--LPPSRALQLRHHHQQRRQPPLVIYELSPQVKNVPAADFMAYVQQQTGYHPSAAAAASTS-------
        G PPR++   L GPRPA L V KDS KIKKPP  LPP  +L L H  Q R  PP++IY +SP+V +  A+DFM  VQ  TG   S+   +  +       
Subjt:  GSPPRRKEIPLNGPRPAALSVAKDSLKIKKPP--LPPSRALQLRHHHQQRRQPPLVIYELSPQVKNVPAADFMAYVQQQTGYHPSAAAAASTS-------

Query:  ------SVDVTEPEPTTAPHS-PPGILSPTPTSLPSISPNIFTPTP
              S  +   E    P S   GILSP P+SLP ISP+ F P+P
Subjt:  ------SVDVTEPEPTTAPHS-PPGILSPTPTSLPSISPNIFTPTP

SwissProt top hitse value%identityAlignment
Q8LGD5 Protein MKS11.7e-0631.82Show/hide
Query:  RRKEIPLNGPRPAALSVAKDSLKIKKPPLPPSRALQLRHHHQQRRQPPLVIYELSPQVKNVPAADFMAYVQQQTG--------------YHPSAAAAAST
        +++++ + GPRP+ LSV KDS KIKKPP  P+             + P+VIY +SP+V +  A++FM  VQ+ TG                P+A  A++ 
Subjt:  RRKEIPLNGPRPAALSVAKDSLKIKKPPLPPSRALQLRHHHQQRRQPPLVIYELSPQVKNVPAADFMAYVQQQTG--------------YHPSAAAAAST

Query:  SSVDVTEPEPTTAPHS----------------PPGILSPTPTSLPSISPNIFTP
        ++      EP     +                 PGILSP+P  LP+ S  IF+P
Subjt:  SSVDVTEPEPTTAPHS----------------PPGILSPTPTSLPSISPNIFTP

Arabidopsis top hitse value%identityAlignment
AT3G18360.1 VQ motif-containing protein1.3e-0440Show/hide
Query:  PLNGPRPAALSVAKDSLKIKKPPLPPSRALQLRHHHQQRRQPPLVIYELSPQVKNVPAADFMAYVQQQTG
        P   P P  L V KDS  IKKPP P S +   +  H      P++IY  +P++ +    DFMA VQ+ TG
Subjt:  PLNGPRPAALSVAKDSLKIKKPPLPPSRALQLRHHHQQRRQPPLVIYELSPQVKNVPAADFMAYVQQQTG

AT3G18690.1 MAP kinase substrate 11.2e-0731.82Show/hide
Query:  RRKEIPLNGPRPAALSVAKDSLKIKKPPLPPSRALQLRHHHQQRRQPPLVIYELSPQVKNVPAADFMAYVQQQTG--------------YHPSAAAAAST
        +++++ + GPRP+ LSV KDS KIKKPP  P+             + P+VIY +SP+V +  A++FM  VQ+ TG                P+A  A++ 
Subjt:  RRKEIPLNGPRPAALSVAKDSLKIKKPPLPPSRALQLRHHHQQRRQPPLVIYELSPQVKNVPAADFMAYVQQQTG--------------YHPSAAAAAST

Query:  SSVDVTEPEPTTAPHS----------------PPGILSPTPTSLPSISPNIFTP
        ++      EP     +                 PGILSP+P  LP+ S  IF+P
Subjt:  SSVDVTEPEPTTAPHS----------------PPGILSPTPTSLPSISPNIFTP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTCCCCTCCGAGAAGAAAAGAAATTCCACTGAATGGCCCCCGCCCCGCCGCCCTCTCCGTCGCCAAAGACTCTCTAAAGATCAAGAAGCCGCCGCTTCCGCCGTC
CCGTGCCCTCCAACTCCGCCACCACCACCAGCAACGCCGGCAACCGCCCCTCGTAATCTACGAACTCTCCCCACAGGTTAAGAACGTCCCCGCCGCTGACTTTATGGCCT
ACGTCCAACAACAAACCGGCTACCACCCCTCCGCCGCCGCCGCCGCTTCTACTTCCTCCGTCGACGTCACCGAACCCGAACCCACGACGGCGCCTCATTCTCCGCCGGGG
ATCCTCTCCCCCACCCCCACTTCCCTGCCATCCATTTCCCCCAATATTTTCACGCCGACGCCGACACCGCCGCCGCCGCCGCCGGATGATGTAATTTCTTATACGTGGCG
TACTGTGGAACCGCCCCCTCTTCCCACGTTCAATCAAAATCCTGTTCATCTTCCTTATGGTTTACCCAATTTTTCACCCCAAGATTTCTTCCACGACAACTCATTCCCGG
ATAACTTCCCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTCCCCTCCGAGAAGAAAAGAAATTCCACTGAATGGCCCCCGCCCCGCCGCCCTCTCCGTCGCCAAAGACTCTCTAAAGATCAAGAAGCCGCCGCTTCCGCCGTC
CCGTGCCCTCCAACTCCGCCACCACCACCAGCAACGCCGGCAACCGCCCCTCGTAATCTACGAACTCTCCCCACAGGTTAAGAACGTCCCCGCCGCTGACTTTATGGCCT
ACGTCCAACAACAAACCGGCTACCACCCCTCCGCCGCCGCCGCCGCTTCTACTTCCTCCGTCGACGTCACCGAACCCGAACCCACGACGGCGCCTCATTCTCCGCCGGGG
ATCCTCTCCCCCACCCCCACTTCCCTGCCATCCATTTCCCCCAATATTTTCACGCCGACGCCGACACCGCCGCCGCCGCCGCCGGATGATGTAATTTCTTATACGTGGCG
TACTGTGGAACCGCCCCCTCTTCCCACGTTCAATCAAAATCCTGTTCATCTTCCTTATGGTTTACCCAATTTTTCACCCCAAGATTTCTTCCACGACAACTCATTCCCGG
ATAACTTCCCATAA
Protein sequenceShow/hide protein sequence
MGSPPRRKEIPLNGPRPAALSVAKDSLKIKKPPLPPSRALQLRHHHQQRRQPPLVIYELSPQVKNVPAADFMAYVQQQTGYHPSAAAAASTSSVDVTEPEPTTAPHSPPG
ILSPTPTSLPSISPNIFTPTPTPPPPPPDDVISYTWRTVEPPPLPTFNQNPVHLPYGLPNFSPQDFFHDNSFPDNFP