; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc04g32080 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g32080
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRNA-binding protein 2-like
Genome locationchr4:24070500..24077665
RNA-Seq ExpressionMoc04g32080
SyntenyMoc04g32080
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647163.1 hypothetical protein Csa_018814 [Cucumis sativus]1.8e-13792.94Show/hide
Query:  MADDYWNRQQPLLPSPGMLKRPRNDYELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVG
        MADDYWNRQQPLLPSP MLKRPR DYELP+SGL TGH+MHNYL SDDRGGPR+VKDTQTIGSAYDRYLQSVQLSSF SGEVPTHG+MGM RPVANRMPVG
Subjt:  MADDYWNRQQPLLPSPGMLKRPRNDYELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVG

Query:  SRMPGPSIPDPVVMSRPPAVSPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGD
        +RMPGP +PDP+VMSRPPAVSPDLAPNGRN+EYGNHLP+DSM+RPGRETVPLPPDASNTLYVEGLP DSSRREVAHIFRPFVGYKELRLVSKESKHRGGD
Subjt:  SRMPGPSIPDPVVMSRPPAVSPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGD

Query:  PLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPGPRSGSGSGG
        PLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPGPRSGSGSGG
Subjt:  PLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPGPRSGSGSGG

XP_022141348.1 RNA-binding protein 2-like [Momordica charantia]4.7e-146100Show/hide
Query:  MADDYWNRQQPLLPSPGMLKRPRNDYELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVG
        MADDYWNRQQPLLPSPGMLKRPRNDYELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVG
Subjt:  MADDYWNRQQPLLPSPGMLKRPRNDYELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVG

Query:  SRMPGPSIPDPVVMSRPPAVSPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGD
        SRMPGPSIPDPVVMSRPPAVSPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGD
Subjt:  SRMPGPSIPDPVVMSRPPAVSPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGD

Query:  PLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPGPRSGSGSGG
        PLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPGPRSGSGSGG
Subjt:  PLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPGPRSGSGSGG

XP_031743537.1 RNA-binding protein 2 isoform X3 [Cucumis sativus]1.8e-13792.94Show/hide
Query:  MADDYWNRQQPLLPSPGMLKRPRNDYELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVG
        MADDYWNRQQPLLPSP MLKRPR DYELP+SGL TGH+MHNYL SDDRGGPR+VKDTQTIGSAYDRYLQSVQLSSF SGEVPTHG+MGM RPVANRMPVG
Subjt:  MADDYWNRQQPLLPSPGMLKRPRNDYELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVG

Query:  SRMPGPSIPDPVVMSRPPAVSPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGD
        +RMPGP +PDP+VMSRPPAVSPDLAPNGRN+EYGNHLP+DSM+RPGRETVPLPPDASNTLYVEGLP DSSRREVAHIFRPFVGYKELRLVSKESKHRGGD
Subjt:  SRMPGPSIPDPVVMSRPPAVSPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGD

Query:  PLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPGPRSGSGSGG
        PLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPGPRSGSGSGG
Subjt:  PLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPGPRSGSGSGG

XP_031743541.1 RNA-binding protein 2 isoform X7 [Cucumis sativus]1.8e-13791.92Show/hide
Query:  MADDYWNRQQPLLPSPGMLKRPRNDYELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVG
        MADDYWNRQQPLLPSP MLKRPR DYELP+SGL TGH+MHNYL SDDRGGPR+VKDTQTIGSAYDRYLQSVQLSSF SGEVPTHG+MGM RPVANRMPVG
Subjt:  MADDYWNRQQPLLPSPGMLKRPRNDYELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVG

Query:  SRMPGPSIPDPVVMSRPPAVSPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGD
        +RMPGP +PDP+VMSRPPAVSPDLAPNGRN+EYGNHLP+DSM+RPGRETVPLPPDASNTLYVEGLP DSSRREVAHIFRPFVGYKELRLVSKESKHRGGD
Subjt:  SRMPGPSIPDPVVMSRPPAVSPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGD

Query:  PLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPGPRSGSGSGGTEAGT
        PLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPGPRSGSGSGG ++GT
Subjt:  PLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPGPRSGSGSGGTEAGT

XP_038884976.1 RNA-binding protein 2-like isoform X2 [Benincasa hispida]1.4e-13793.33Show/hide
Query:  MADDYWNRQQPLLPSPGMLKRPRNDYELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVG
        MADDYWNRQQPLLPSPG+LKRPR +YELPSSGLP+GHEMHNYL SDDRGG R+VKDTQTIGSAYDRYLQSVQLSSF SGEVPTHG+MGM RPVANRMPVG
Subjt:  MADDYWNRQQPLLPSPGMLKRPRNDYELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVG

Query:  SRMPGPSIPDPVVMSRPPAVSPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGD
        SRMPGP +PDP+VMSRPPAVSPD+APNGRNIEYGNHLP+DSM+RPGRETVPLPPDASNTLYVEGLP DSSRREVAHIFRPFVGYKELRLVSKESKHRGGD
Subjt:  SRMPGPSIPDPVVMSRPPAVSPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGD

Query:  PLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPGPRSGSGSGG
        PLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPGPRSGSGSGG
Subjt:  PLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPGPRSGSGSGG

TrEMBL top hitse value%identityAlignment
A0A0A0KCN5 RRM domain-containing protein3.7e-15264.15Show/hide
Query:  ELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVGSRMPGPSIPDPVVMSRPPAVSPDLAP
        ELP+SGL TGH+MHNYL SDDRGGPR+VKDTQTIGSAYDRYLQSVQLSSF SGEVPTHG+MGM RPVANRMPVG+RMPGP +PDP+VMSRPPAVSPDLAP
Subjt:  ELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVGSRMPGPSIPDPVVMSRPPAVSPDLAP

Query:  NGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQGYK
        NGRN+EYGNHLP+DSM+RPGRETVPLPPDASNTLYVEGLP DSSRREVAHIFRPFVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQGYK
Subjt:  NGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQGYK

Query:  MDEQDPESNYLRLQFSRHPGPRSGSGSGGTE---------------AGTFRFPASSNAPKSAYFGRHSTHTSMQFPRLLRLER-----------------
        MDEQDPESNYLRLQFSRHPGPRSGSGSGG                 AG +R PASSN PKSAY   HST+ S+   + L                     
Subjt:  MDEQDPESNYLRLQFSRHPGPRSGSGSGGTE---------------AGTFRFPASSNAPKSAYFGRHSTHTSMQFPRLLRLER-----------------

Query:  ---NMGC----ATAILIAWVCLNVSTKLSAQHVHPSSPPPAAPPPIVSLFPLPPKKHKQLQWSLPPVA-----EPIVPYFPFVY--IPSPSVKPYE-HTS
           N  C      ++L+A V LN+ +K SA + H        PPP+       PKKHKQ   S PPVA     EPIVPYFPFVY  IPSPS KPYE H  
Subjt:  ---NMGC----ATAILIAWVCLNVSTKLSAQHVHPSSPPPAAPPPIVSLFPLPPKKHKQLQWSLPPVA-----EPIVPYFPFVY--IPSPSVKPYE-HTS

Query:  PP---PPSPVA-VAEPIVPYFPFVYI--PSPSVRPYEHTSPPPPSPVAVAEPIVPYFPFTFTPSPSEEPYEHTPPPPSAKCPYRSPLNHLP
        PP   P SP++  + P+VPYFPFVY+  PSPS +P E  +P P   +    P+VPY+ F F+P PS +   + PP P     + SPL   P
Subjt:  PP---PPSPVA-VAEPIVPYFPFVYI--PSPSVRPYEHTSPPPPSPVAVAEPIVPYFPFTFTPSPSEEPYEHTPPPPSAKCPYRSPLNHLP

A0A1S3B4F0 RNA-binding protein 21.3e-13692.55Show/hide
Query:  MADDYWNRQQPLLPSPGMLKRPRNDYELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVG
        MADDYWNRQQPLLPSP MLKRPR DYELP+SGL TGH+MHNYL SDDRGGPR+VKDTQTIGSAYDRYLQSVQLSSF SGEVPTHG+MGM RPVANRMPVG
Subjt:  MADDYWNRQQPLLPSPGMLKRPRNDYELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVG

Query:  SRMPGPSIPDPVVMSRPPAVSPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGD
        +RMPGP +PDP+VMSRPPAVSPDLAPNGRNIEYGNHLP+DSM+RPGRETVPLPPDASNTLYVEGLP DSSRREVAHIFRPFVGYKELRLVSKESKHRGGD
Subjt:  SRMPGPSIPDPVVMSRPPAVSPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGD

Query:  PLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPGPRSGSGSGG
        PLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPGPRSG GS G
Subjt:  PLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPGPRSGSGSGG

A0A6J1CKA2 RNA-binding protein 2-like2.3e-146100Show/hide
Query:  MADDYWNRQQPLLPSPGMLKRPRNDYELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVG
        MADDYWNRQQPLLPSPGMLKRPRNDYELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVG
Subjt:  MADDYWNRQQPLLPSPGMLKRPRNDYELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVG

Query:  SRMPGPSIPDPVVMSRPPAVSPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGD
        SRMPGPSIPDPVVMSRPPAVSPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGD
Subjt:  SRMPGPSIPDPVVMSRPPAVSPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGD

Query:  PLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPGPRSGSGSGG
        PLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPGPRSGSGSGG
Subjt:  PLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPGPRSGSGSGG

A0A6J1E3U2 RNA-binding protein 2-like6.1e-13189.8Show/hide
Query:  MADDYWNRQQPLLPSPGMLKRPRNDYELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVG
        MADDYWNRQQPLLPSPGMLKRPR +YELPSSG P GH+MHN+L SDDR GP AVKDTQ IGSAYDRYLQSVQLSS  SGEVPT G+MGM RP+ANR+PVG
Subjt:  MADDYWNRQQPLLPSPGMLKRPRNDYELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVG

Query:  SRMPGPSIPDPVVMSRPPAVSPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGD
        SRMPGPSIPDPVVMSRPPAVSPDL PNGRNIEYGNHLP++SM RPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGD
Subjt:  SRMPGPSIPDPVVMSRPPAVSPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGD

Query:  PLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPGPRSGSGSGG
        PLILCFVDFAN ACAATAMSALQGYKMDEQDP+SNYLRLQFSRHPGPRSG+G  G
Subjt:  PLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPGPRSGSGSGG

A0A6J1JXN9 RNA-binding protein 2-like isoform X27.2e-13290.2Show/hide
Query:  MADDYWNRQQPLLPSPGMLKRPRNDYELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVG
        MADDYWNRQQPLLPSPGMLKRPR +YE PSSGLP  HEMHNY+ +DD GGPRAVKDTQTIGSAYDRYLQSVQLSSF SGEVPTHG+MGM RP+ANRMP+G
Subjt:  MADDYWNRQQPLLPSPGMLKRPRNDYELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVG

Query:  SRMPGPSIPDPVVMSRPPAVSPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGD
        +RMPGP +PDPVVMSRP AVSPDLA NGRNIEYGNHLP+DS  RP RETVPLPPDA+NTLYVEGLPSDSSRREVAHIFRPFVGYKELRLV+KESKHRGGD
Subjt:  SRMPGPSIPDPVVMSRPPAVSPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGD

Query:  PLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPGPRSGSGSGG
        PLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPGPRSGSGSGG
Subjt:  PLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPGPRSGSGSGG

SwissProt top hitse value%identityAlignment
A1A6K6 Nuclear speckle RNA-binding protein A1.7e-5853.39Show/hide
Query:  MADDYWNRQ-QPLLPSPGMLKRPRNDYELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPV
        MAD YWN+Q Q   P  G +KRPR+D+E PSS +  GH    Y   +D   P    DT+TIGSAYDRYLQSVQ     SGE    G + M R        
Subjt:  MADDYWNRQ-QPLLPSPGMLKRPRNDYELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPV

Query:  GSRMPGPSIPDPVVMSRPPAVSPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGG
        G  +      D  ++ R   +  D  PNG  I +    P+      GR    LP DASNTLYVEGLPS+ SRREVAHIFRPFVGY+E+RLV+K+SKHR G
Subjt:  GSRMPGPSIPDPVVMSRPPAVSPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGG

Query:  DPLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPGPRSG
        DP++LCFVDF NPACAATA+SALQGY+MDE + +S +LRLQFSR PG R G
Subjt:  DPLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPGPRSG

F4HWF9 Nuclear speckle RNA-binding protein B2.6e-6256.95Show/hide
Query:  LPTGHEMHNYLVSD-DRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVGSRMPGPSIPDPVVMSRPPAVSPDLAPNGRNI
        +P+G +MH+YL  D DRG P +VKDT++IGSAYDRYLQS+Q     S E      +GM R   + M     MPGPS+ + ++     ++  D  PNGR++
Subjt:  LPTGHEMHNYLVSD-DRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVGSRMPGPSIPDPVVMSRPPAVSPDLAPNGRNI

Query:  EYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQGYKMDEQD
         +G    +DS+ RPGRE  PLPPD SNTLYVEGLPS+ SRREV+HIFRPFVGY+E+RLV+++SKHR GDP +LCFVDF N ACAATA+SALQ Y+MDE +
Subjt:  EYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQGYKMDEQD

Query:  PESNYLRLQFSRHPGPRSGSGSG
        P+S  LRLQF R+PGPR G   G
Subjt:  PESNYLRLQFSRHPGPRSGSGSG

G7ID19 RNA-binding protein 21.4e-8462.45Show/hide
Query:  MADDYWNRQQPLLPSP-GMLKRPRNDYELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPV
        MAD +WNRQQ  LP P GMLKRPR +Y+   SG+ +G+E+HNY+  ++  G + + DT+ +GSAYDR+LQS  L+SFNSGE    G +G AR V      
Subjt:  MADDYWNRQQPLLPSP-GMLKRPRNDYELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPV

Query:  GSRMPGPSIPDPVVMSRPPAV--SPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHR
           +PG S+ DP  M     V   PDL+ NGR++ +G  LP+D+++RPG ET+PLP DAS+TLYVEGLPSDS++REVAHIFRPFVGY+E+RLV+KESKHR
Subjt:  GSRMPGPSIPDPVVMSRPPAV--SPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHR

Query:  GGDPLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPGPRSG
        GGDPLILCFVDFANPACAATA+SALQGYK+DE +PES+YLRLQFSR PG RSG
Subjt:  GGDPLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPGPRSG

Q6JB11 Protein MATERNALLY EXPRESSED GENE 55.4e-2864.52Show/hide
Query:  MDS--MTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQGYKMDE
        MDS  M   GR   PLPPDAS+TLY+EGLP++ +RREV+HIFRPFVG++E+RLV+KES+H GGDP +LCFVDF NPA A  A+ ALQG+  D+
Subjt:  MDS--MTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQGYKMDE

Q8H0P8 RNA-binding protein 11.4e-8460.43Show/hide
Query:  MADDYWNRQQPLLPSPGMLKRPRNDYELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVG
        MAD YWNRQQ LLP  G+ KRPR DYE+P+SGLP+G+EMH     +DR G   VKD++TIGSAYDRYLQ  Q+ SF SGE  T G +G+ R +       
Subjt:  MADDYWNRQQPLLPSPGMLKRPRNDYELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVG

Query:  SRMPGPSIPDPVVM-SRPPAVSPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGG
          +P  S+ DP  M  R     PDLAPNGR + YG   PMD ++R G E   LPPDAS TLY+EGLPSD +RREVAHIFRPFVGY+E+RLVSKE+KHR G
Subjt:  SRMPGPSIPDPVVM-SRPPAVSPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGG

Query:  DPLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPGPRSGSGSGGTEAGTFRFPASSNAPKSAYFGR
        DPLILCFVDFANPACAATA+SALQGYK+DE +PES++LRLQFSR+PGPRSG G           P SS  P+  +  R
Subjt:  DPLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPGPRSGSGSGGTEAGTFRFPASSNAPKSAYFGR

Arabidopsis top hitse value%identityAlignment
AT1G21320.1 nucleotide binding;nucleic acid binding1.8e-6356.95Show/hide
Query:  LPTGHEMHNYLVSD-DRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVGSRMPGPSIPDPVVMSRPPAVSPDLAPNGRNI
        +P+G +MH+YL  D DRG P +VKDT++IGSAYDRYLQS+Q     S E      +GM R   + M     MPGPS+ + ++     ++  D  PNGR++
Subjt:  LPTGHEMHNYLVSD-DRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVGSRMPGPSIPDPVVMSRPPAVSPDLAPNGRNI

Query:  EYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQGYKMDEQD
         +G    +DS+ RPGRE  PLPPD SNTLYVEGLPS+ SRREV+HIFRPFVGY+E+RLV+++SKHR GDP +LCFVDF N ACAATA+SALQ Y+MDE +
Subjt:  EYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQGYKMDEQD

Query:  PESNYLRLQFSRHPGPRSGSGSG
        P+S  LRLQF R+PGPR G   G
Subjt:  PESNYLRLQFSRHPGPRSGSGSG

AT1G21320.2 nucleotide binding;nucleic acid binding2.7e-7054.41Show/hide
Query:  MADDYWNRQQ----PLLPSPGML--KRPRNDYELPSSGLPTGHEMHNYLVSD-DRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPV
        MAD+YWN+Q+    P+  +P +L  KRPR+D++     +P+G +MH+YL  D DRG P +VKDT++IGSAYDRYLQS+Q     S E      +GM R  
Subjt:  MADDYWNRQQ----PLLPSPGML--KRPRNDYELPSSGLPTGHEMHNYLVSD-DRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPV

Query:  ANRMPVGSRMPGPSIPDPVVMSRPPAVSPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKE
         + M     MPGPS+ + ++     ++  D  PNGR++ +G    +DS+ RPGRE  PLPPD SNTLYVEGLPS+ SRREV+HIFRPFVGY+E+RLV+++
Subjt:  ANRMPVGSRMPGPSIPDPVVMSRPPAVSPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKE

Query:  SKHRGGDPLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPGPRSGSGSG
        SKHR GDP +LCFVDF N ACAATA+SALQ Y+MDE +P+S  LRLQF R+PGPR G   G
Subjt:  SKHRGGDPLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPGPRSGSGSG

AT1G76940.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.2e-5953.39Show/hide
Query:  MADDYWNRQ-QPLLPSPGMLKRPRNDYELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPV
        MAD YWN+Q Q   P  G +KRPR+D+E PSS +  GH    Y   +D   P    DT+TIGSAYDRYLQSVQ     SGE    G + M R        
Subjt:  MADDYWNRQ-QPLLPSPGMLKRPRNDYELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPV

Query:  GSRMPGPSIPDPVVMSRPPAVSPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGG
        G  +      D  ++ R   +  D  PNG  I +    P+      GR    LP DASNTLYVEGLPS+ SRREVAHIFRPFVGY+E+RLV+K+SKHR G
Subjt:  GSRMPGPSIPDPVVMSRPPAVSPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGG

Query:  DPLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPGPRSG
        DP++LCFVDF NPACAATA+SALQGY+MDE + +S +LRLQFSR PG R G
Subjt:  DPLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPGPRSG

AT1G76940.2 RNA-binding (RRM/RBD/RNP motifs) family protein8.0e-4361.7Show/hide
Query:  DPVVMSRPPAVSPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGDPLILCFVDF
        D  ++ R   +  D  PNG  I +    P+      GR    LP DASNTLYVEGLPS+ SRREVAHIFRPFVGY+E+RLV+K+SKHR GDP++LCFVDF
Subjt:  DPVVMSRPPAVSPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGDPLILCFVDF

Query:  ANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPGPRSG
         NPACAATA+SALQGY+MDE + +S +LRLQFSR PG R G
Subjt:  ANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPGPRSG

AT4G13340.1 Leucine-rich repeat (LRR) family protein7.6e-0936.69Show/hide
Query:  SSPPPAAPPPIVSLFPLPPKKHKQLQWSLPPVAEPIVPYFPFVYIPSPSVKPYEHTSPPPPSPVAVAEPIVPYFPFVYIPSPSVRPYEHTSPPPPSPVAV
        S PPP +PPP +  +  PP     +  S PP      P  P   I  P   P    SPPPP PV       P  P VY  SP   P  ++SPPPP PV  
Subjt:  SSPPPAAPPPIVSLFPLPPKKHKQLQWSLPPVAEPIVPYFPFVYIPSPSVKPYEHTSPPPPSPVAVAEPIVPYFPFVYIPSPSVRPYEHTSPPPPSPVAV

Query:  AEPIVPYFPFTFTPSPSEEPYEHTPPPPSAKCPYRSP----LNHLPPGVLLREKPPWPPNFTVKTAPPP
        + P  P   +  +P PS   Y   PPPPSA C    P    ++H PP  ++   PP PP   +  +PPP
Subjt:  AEPIVPYFPFTFTPSPSEEPYEHTPPPPSAKCPYRSP----LNHLPPGVLLREKPPWPPNFTVKTAPPP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGATGACTATTGGAATCGGCAGCAGCCTCTGCTTCCCTCGCCAGGCATGCTTAAACGACCCCGTAATGATTACGAACTTCCATCCTCTGGATTGCCTACAGGCCA
TGAGATGCACAATTATTTAGTAAGTGATGATCGTGGTGGTCCTCGGGCTGTTAAAGATACACAAACGATTGGATCAGCATATGATCGTTATCTCCAAAGTGTGCAACTTT
CTTCTTTTAATTCTGGAGAAGTACCTACCCATGGGGATATGGGAATGGCAAGGCCTGTTGCAAACAGAATGCCAGTTGGGAGTAGAATGCCTGGGCCTTCAATACCCGAT
CCTGTTGTAATGAGTCGTCCTCCTGCAGTTTCTCCCGATCTGGCACCAAATGGTCGAAATATTGAGTATGGTAATCATCTCCCCATGGATTCAATGACCAGACCAGGACG
TGAAACTGTACCTCTTCCACCTGATGCCTCCAACACTTTATATGTTGAAGGACTTCCTTCAGACAGTTCCAGGAGAGAAGTAGCTCATATTTTCCGCCCGTTTGTGGGAT
ATAAAGAATTGAGACTTGTGAGCAAAGAATCTAAACATCGTGGTGGGGACCCTCTTATATTATGTTTTGTGGATTTTGCAAACCCAGCCTGTGCAGCAACTGCCATGAGT
GCCTTGCAAGGTTATAAAATGGACGAACAAGATCCTGAATCTAATTACTTGCGACTACAGTTCTCACGACATCCAGGTCCGAGGTCTGGTTCTGGATCTGGTGGTACTGA
AGCAGGAACTTTCAGATTTCCTGCATCCTCCAACGCACCAAAATCAGCCTATTTCGGTCGCCATTCAACCCATACGAGTATGCAATTCCCCAGGTTGTTGAGATTGGAGA
GGAATATGGGGTGTGCAACTGCAATACTTATTGCATGGGTCTGTTTAAATGTGTCAACAAAATTAAGTGCACAACACGTTCATCCATCTTCTCCTCCTCCAGCAGCTCCT
CCTCCCATTGTTTCCTTGTTTCCCTTGCCACCAAAGAAGCATAAGCAATTACAGTGGTCACTACCTCCGGTTGCTGAGCCAATAGTTCCCTATTTTCCTTTTGTGTATAT
ACCATCTCCATCTGTGAAGCCTTATGAACACACATCACCACCACCACCATCTCCGGTTGCCGTTGCGGAGCCAATAGTTCCCTATTTCCCTTTTGTATATATACCATCTC
CATCTGTGAGACCTTATGAACACACATCACCACCACCACCATCTCCGGTTGCTGTTGCCGAACCGATAGTTCCATATTTTCCTTTCACATTTACACCATCCCCATCGGAG
GAACCTTATGAACATACACCACCGCCGCCCTCTGCAAAATGCCCCTATCGTTCTCCACTCAACCACCTTCCCCCGGGGGTCTTACTAAGGGAGAAGCCGCCATGGCCACC
CAATTTCACAGTTAAAACCGCTCCACCTCCTTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGATGACTATTGGAATCGGCAGCAGCCTCTGCTTCCCTCGCCAGGCATGCTTAAACGACCCCGTAATGATTACGAACTTCCATCCTCTGGATTGCCTACAGGCCA
TGAGATGCACAATTATTTAGTAAGTGATGATCGTGGTGGTCCTCGGGCTGTTAAAGATACACAAACGATTGGATCAGCATATGATCGTTATCTCCAAAGTGTGCAACTTT
CTTCTTTTAATTCTGGAGAAGTACCTACCCATGGGGATATGGGAATGGCAAGGCCTGTTGCAAACAGAATGCCAGTTGGGAGTAGAATGCCTGGGCCTTCAATACCCGAT
CCTGTTGTAATGAGTCGTCCTCCTGCAGTTTCTCCCGATCTGGCACCAAATGGTCGAAATATTGAGTATGGTAATCATCTCCCCATGGATTCAATGACCAGACCAGGACG
TGAAACTGTACCTCTTCCACCTGATGCCTCCAACACTTTATATGTTGAAGGACTTCCTTCAGACAGTTCCAGGAGAGAAGTAGCTCATATTTTCCGCCCGTTTGTGGGAT
ATAAAGAATTGAGACTTGTGAGCAAAGAATCTAAACATCGTGGTGGGGACCCTCTTATATTATGTTTTGTGGATTTTGCAAACCCAGCCTGTGCAGCAACTGCCATGAGT
GCCTTGCAAGGTTATAAAATGGACGAACAAGATCCTGAATCTAATTACTTGCGACTACAGTTCTCACGACATCCAGGTCCGAGGTCTGGTTCTGGATCTGGTGGTACTGA
AGCAGGAACTTTCAGATTTCCTGCATCCTCCAACGCACCAAAATCAGCCTATTTCGGTCGCCATTCAACCCATACGAGTATGCAATTCCCCAGGTTGTTGAGATTGGAGA
GGAATATGGGGTGTGCAACTGCAATACTTATTGCATGGGTCTGTTTAAATGTGTCAACAAAATTAAGTGCACAACACGTTCATCCATCTTCTCCTCCTCCAGCAGCTCCT
CCTCCCATTGTTTCCTTGTTTCCCTTGCCACCAAAGAAGCATAAGCAATTACAGTGGTCACTACCTCCGGTTGCTGAGCCAATAGTTCCCTATTTTCCTTTTGTGTATAT
ACCATCTCCATCTGTGAAGCCTTATGAACACACATCACCACCACCACCATCTCCGGTTGCCGTTGCGGAGCCAATAGTTCCCTATTTCCCTTTTGTATATATACCATCTC
CATCTGTGAGACCTTATGAACACACATCACCACCACCACCATCTCCGGTTGCTGTTGCCGAACCGATAGTTCCATATTTTCCTTTCACATTTACACCATCCCCATCGGAG
GAACCTTATGAACATACACCACCGCCGCCCTCTGCAAAATGCCCCTATCGTTCTCCACTCAACCACCTTCCCCCGGGGGTCTTACTAAGGGAGAAGCCGCCATGGCCACC
CAATTTCACAGTTAAAACCGCTCCACCTCCTTTTTGA
Protein sequenceShow/hide protein sequence
MADDYWNRQQPLLPSPGMLKRPRNDYELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVGSRMPGPSIPD
PVVMSRPPAVSPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMS
ALQGYKMDEQDPESNYLRLQFSRHPGPRSGSGSGGTEAGTFRFPASSNAPKSAYFGRHSTHTSMQFPRLLRLERNMGCATAILIAWVCLNVSTKLSAQHVHPSSPPPAAP
PPIVSLFPLPPKKHKQLQWSLPPVAEPIVPYFPFVYIPSPSVKPYEHTSPPPPSPVAVAEPIVPYFPFVYIPSPSVRPYEHTSPPPPSPVAVAEPIVPYFPFTFTPSPSE
EPYEHTPPPPSAKCPYRSPLNHLPPGVLLREKPPWPPNFTVKTAPPPF