; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc04g32160 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g32160
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionHMA domain-containing protein
Genome locationchr4:24146187..24149635
RNA-Seq ExpressionMoc04g32160
SyntenyMoc04g32160
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB5551992.1 hypothetical protein DKX38_009303 [Salix brachista]1.1e-0429.33Show/hide
Query:  GATSLPTIERLQCLLQRSSMCSFFIDDPVGAASSPRIERVQLLRQRWSTSSSPTIECKFFANNRAGAASSSTVQWVQLLRQGS---SGCKFFAN-DRVQV
        G  S P +E++Q   + S+  S       G  SS ++E+VQL  +               +N  +G  SS  V+ VQL  + S   SGC      ++VQ+
Subjt:  GATSLPTIERLQCLLQRSSMCSFFIDDPVGAASSPRIERVQLLRQRWSTSSSPTIECKFFANNRAGAASSSTVQWVQLLRQGS---SGCKFFAN-DRVQV

Query:  LRQQSSAS----YSPTIERVQLFHRRSSGCSFFAKDRAGAASSSTVQWVQLLRQGSSGCNFFSNDRVGATSSPTIERLQLFADD---LVGATSSPKIERM
          + S+ +     SP +E+VQL    +S C+      +G  SS  V+ VQL  +        SN   G  SSP +E++QL A++     G  SS K+E++
Subjt:  LRQQSSAS----YSPTIERVQLFHRRSSGCSFFAKDRAGAASSSTVQWVQLLRQGSSGCNFFSNDRVGATSSPTIERLQLFADD---LVGATSSPKIERM

Query:  QCLHQQSS
        Q     S+
Subjt:  QCLHQQSS
TrEMBL top hitse value%identityAlignment
A0A5N5MAN4 HMA domain-containing protein5.5e-0529.33Show/hide
Query:  GATSLPTIERLQCLLQRSSMCSFFIDDPVGAASSPRIERVQLLRQRWSTSSSPTIECKFFANNRAGAASSSTVQWVQLLRQGS---SGCKFFAN-DRVQV
        G  S P +E++Q   + S+  S       G  SS ++E+VQL  +               +N  +G  SS  V+ VQL  + S   SGC      ++VQ+
Subjt:  GATSLPTIERLQCLLQRSSMCSFFIDDPVGAASSPRIERVQLLRQRWSTSSSPTIECKFFANNRAGAASSSTVQWVQLLRQGS---SGCKFFAN-DRVQV

Query:  LRQQSSAS----YSPTIERVQLFHRRSSGCSFFAKDRAGAASSSTVQWVQLLRQGSSGCNFFSNDRVGATSSPTIERLQLFADD---LVGATSSPKIERM
          + S+ +     SP +E+VQL    +S C+      +G  SS  V+ VQL  +        SN   G  SSP +E++QL A++     G  SS K+E++
Subjt:  LRQQSSAS----YSPTIERVQLFHRRSSGCSFFAKDRAGAASSSTVQWVQLLRQGSSGCNFFSNDRVGATSSPTIERLQLFADD---LVGATSSPKIERM

Query:  QCLHQQSS
        Q     S+
Subjt:  QCLHQQSS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGATGCCTTCCGCTTCTTGCTTGTCGAAGGATCTTTGAGTTCTTCAGCTTTGCAGCTTGTGAAGTTCTTCAACTTTGCAGCTTGTGAAGTGTTTCGCTTG
TTGAAGTTCTTCGACTTTGCGGCTTGTGAAGTTCTTCGGCTTTGCAGCTTTTTGATGGAGTCTTCAAGTATTGTTGCTTGGGAAGATAATATCCAATGTTCTTGG
AGTCTCGTACTCTTCAAGTCTCCAATTCTTCAAGTCTTGTTGGCTTTGGATGCTTCGCTTGACTCTGAACGATTTGGTGACCTTCCTTACAATGATTTGAGTATG
TTAATGCTTCTTCCGTTGGTTGAGGTGTTCCTAGTGATTCCATTGCTGAGTAGGTTAACGCCTCTTTCGCTGGTTGAAGTGTTCCTAAGTCAGCGGTGGTCACCT
CCTGTCTGCCCTGCAGTGACTTCATTGCTGAGTAGGTTAACGTCTCTTCCACTGGTTGAGGTGTTCCTAGGTGTTCCTAGGTCAGCATGGTCACCTCCTTTGACA
AGGATCGAGTGGGTGCAGCGTCTTCGCCAAGGATCGAGCGGGTGCAACTTCTTCGCCAATGGTCGAGTGGGTGCAACTTCTTTGCCAACAATCGAGCGGTTGCAA
TGTCTTCTCCAACGATCGAGCATGTGCAGCTTCTTCATCGATGATCCAGTGGGTGCAGCTTCTTCGCCAAGGATCGAGCGGGTGCAACTTCTTCGCCAACGATGG
AGTACAAGTTCTTCGCCAACAATCGAGTGCAAGTTCTTTGCCAACAATCGAGCGGGTGCAGCTTCTTCATCGACGGTCCAGTGGGTGCAGCTTCTTCGCCAAGGA
TCGAGTGGGTGCAAGTTCTTCGCCAACGATCGAGTGCAAGTTCTTCGCCAACAATCGAGTGCAAGTTATTCGCCAACAATCGAGCGGGTGCAGCTTTTTCATCGA
CGGTCCAGTGGGTGCAGCTTCTTCGCCAAGGATCGAGCGGGTGCAGCTTCTTCATCGACGGTGCAGTGGGTGCAGCTTCTTCGCCAAGGATCGAGCGGGTGTAAC
TTCTTCAGCAACGATCGAGTGGGTGCAACTTCTTCACCAACGATCGAGCGGCTGCAGCTCTTCGCCGACGATCTAGTGGGTGCAACTTCTTCGCCAAAGATCGAG
CGGATGCAGTGTCTTCATCAACAATCCAGCGAAAACTCTGTTTGGGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTGATGCCTTCCGCTTCTTGCTTGTCGAAGGATCTTTGAGTTCTTCAGCTTTGCAGCTTGTGAAGTTCTTCAACTTTGCAGCTTGTGAAGTGTTTCGCTTG
TTGAAGTTCTTCGACTTTGCGGCTTGTGAAGTTCTTCGGCTTTGCAGCTTTTTGATGGAGTCTTCAAGTATTGTTGCTTGGGAAGATAATATCCAATGTTCTTGG
AGTCTCGTACTCTTCAAGTCTCCAATTCTTCAAGTCTTGTTGGCTTTGGATGCTTCGCTTGACTCTGAACGATTTGGTGACCTTCCTTACAATGATTTGAGTATG
TTAATGCTTCTTCCGTTGGTTGAGGTGTTCCTAGTGATTCCATTGCTGAGTAGGTTAACGCCTCTTTCGCTGGTTGAAGTGTTCCTAAGTCAGCGGTGGTCACCT
CCTGTCTGCCCTGCAGTGACTTCATTGCTGAGTAGGTTAACGTCTCTTCCACTGGTTGAGGTGTTCCTAGGTGTTCCTAGGTCAGCATGGTCACCTCCTTTGACA
AGGATCGAGTGGGTGCAGCGTCTTCGCCAAGGATCGAGCGGGTGCAACTTCTTCGCCAATGGTCGAGTGGGTGCAACTTCTTTGCCAACAATCGAGCGGTTGCAA
TGTCTTCTCCAACGATCGAGCATGTGCAGCTTCTTCATCGATGATCCAGTGGGTGCAGCTTCTTCGCCAAGGATCGAGCGGGTGCAACTTCTTCGCCAACGATGG
AGTACAAGTTCTTCGCCAACAATCGAGTGCAAGTTCTTTGCCAACAATCGAGCGGGTGCAGCTTCTTCATCGACGGTCCAGTGGGTGCAGCTTCTTCGCCAAGGA
TCGAGTGGGTGCAAGTTCTTCGCCAACGATCGAGTGCAAGTTCTTCGCCAACAATCGAGTGCAAGTTATTCGCCAACAATCGAGCGGGTGCAGCTTTTTCATCGA
CGGTCCAGTGGGTGCAGCTTCTTCGCCAAGGATCGAGCGGGTGCAGCTTCTTCATCGACGGTGCAGTGGGTGCAGCTTCTTCGCCAAGGATCGAGCGGGTGTAAC
TTCTTCAGCAACGATCGAGTGGGTGCAACTTCTTCACCAACGATCGAGCGGCTGCAGCTCTTCGCCGACGATCTAGTGGGTGCAACTTCTTCGCCAAAGATCGAG
CGGATGCAGTGTCTTCATCAACAATCCAGCGAAAACTCTGTTTGGGGATGA
Protein sequenceShow/hide protein sequence
MVDAFRFLLVEGSLSSSALQLVKFFNFAACEVFRLLKFFDFAACEVLRLCSFLMESSSIVAWEDNIQCSWSLVLFKSPILQVLLALDASLDSERFGDLPYNDLSM
LMLLPLVEVFLVIPLLSRLTPLSLVEVFLSQRWSPPVCPAVTSLLSRLTSLPLVEVFLGVPRSAWSPPLTRIEWVQRLRQGSSGCNFFANGRVGATSLPTIERLQ
CLLQRSSMCSFFIDDPVGAASSPRIERVQLLRQRWSTSSSPTIECKFFANNRAGAASSSTVQWVQLLRQGSSGCKFFANDRVQVLRQQSSASYSPTIERVQLFHR
RSSGCSFFAKDRAGAASSSTVQWVQLLRQGSSGCNFFSNDRVGATSSPTIERLQLFADDLVGATSSPKIERMQCLHQQSSENSVWG