; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc04g33270 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g33270
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRNA-directed DNA polymerase
Genome locationchr4:25041657..25049504
RNA-Seq ExpressionMoc04g33270
SyntenyMoc04g33270
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0043170 - macromolecule metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003824 - catalytic activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR005162 - Retrotransposon gag domain
IPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054966.1 transposon Ty3-I Gag-Pol polyprotein isoform X1 [Cucumis melo var. makuwa]4.7e-8047.19Show/hide
Query:  IEQPSILSPRSSTERLL---SRQNEFNADSSSEEEEELLAFEGDRFGRYPNPHRNQDSNEYKMKIDLPTFNGKMDIEGFLDWVKNVENFFGYMGTLEHKK
        I +   L P+   +R +   +R+ E    SSSEE +     E  R     N  + ++++EYKMKIDLP+++GK +IE FLDW+KN ENFF YMGT ++KK
Subjt:  IEQPSILSPRSSTERLL---SRQNEFNADSSSEEEEELLAFEGDRFGRYPNPHRNQDSNEYKMKIDLPTFNGKMDIEGFLDWVKNVENFFGYMGTLEHKK

Query:  VRLVALKLKGGASAWWDQLEINRHRYGKKPIRSWERMKKFMRERFLPVNFEQILYNQYQNCRQGSRSIADYSEEFHRLGARTNLLEGQQHLVARFIGGLR
        V LVALKLKGGASAWWDQ+ +NR + GK PIRSWE+MKK M++RF+P N+EQ LY QYQNCRQG R  A+Y EEFHRLG RTNL+EG++HL++ F+GGLR
Subjt:  VRLVALKLKGGASAWWDQLEINRHRYGKKPIRSWERMKKFMRERFLPVNFEQILYNQYQNCRQGSRSIADYSEEFHRLGARTNLLEGQQHLVARFIGGLR

Query:  SDIKEQIALQPIGYLNEVISTATTIEEQVGNRFKKQYTRRTNWEQGGTSKKPTSTSDNISSPNRTIPTTKGKTLDTDLVKSNHTDLVTGKKQG-NIYHRP
         D+KE++ LQP  +L+E I+ A T+EE + NR K   TR+  WE    SKK T+ +  + +     P  + ++       S   ++  G+K+G N Y RP
Subjt:  SDIKEQIALQPIGYLNEVISTATTIEEQVGNRFKKQYTRRTNWEQGGTSKKPTSTSDNISSPNRTIPTTKGKTLDTDLVKSNHTDLVTGKKQG-NIYHRP

Query:  TLGKCFRCGQTGHLSNECPHRKIINMVEE-DVLQEDSSEEIVDDIDYTVPDEGSGL
          G C+RCGQ GH SN+CP RK I + ++ D     S  E  ++ +    DEG  L
Subjt:  TLGKCFRCGQTGHLSNECPHRKIINMVEE-DVLQEDSSEEIVDDIDYTVPDEGSGL

XP_022138328.1 uncharacterized protein LOC111009540 isoform X2 [Momordica charantia]7.8e-7549.24Show/hide
Query:  EFNADSSSEEEEELLAFEGDRFGRYPN-PHRNQDSNEYKMKIDLPTFNGKMDIEGFLDWVKNVENFFGYMGTLEHKKVRLVALKLKGGASAWWDQLEINR
        E + DS + + +E    +  RF R  +   R     ++KMKIDLPTFNGKMD+E FLD VKNVENFF Y  T E KKV+LVA K++ GASAWWDQLEIN 
Subjt:  EFNADSSSEEEEELLAFEGDRFGRYPN-PHRNQDSNEYKMKIDLPTFNGKMDIEGFLDWVKNVENFFGYMGTLEHKKVRLVALKLKGGASAWWDQLEINR

Query:  HRYGKKPIRSWERMKKFMRERFLPVNFEQILYNQYQNCRQGSRSIADYSEEFHRLGARTNLLEGQQHLVARFIGGLRSDIKEQIALQPIGYLNEVISTAT
         R GK+PIRSW RM + MRERFLP NFEQ+LY  YQ CRQG ++IADY+E FHRLGA+TN+ E + + +ARF+ GLR DI++Q+ +QPI  L + I  AT
Subjt:  HRYGKKPIRSWERMKKFMRERFLPVNFEQILYNQYQNCRQGSRSIADYSEEFHRLGARTNLLEGQQHLVARFIGGLRSDIKEQIALQPIGYLNEVISTAT

Query:  TIEEQVGNRFKKQYTRRTNWEQGGTSKKPTSTSDNISSPNRTIPTTKGKTLDTDLVKSNHTDLVTGKKQGNIYHRPTLGKCFRCGQTGHLSNECPHRKII
         IE++   +  +   RRT W++   SK  T+ +        T  +T     D        T   + K+  N Y RPTLGKCFRCGQ  HLSNECP R+ +
Subjt:  TIEEQVGNRFKKQYTRRTNWEQGGTSKKPTSTSDNISSPNRTIPTTKGKTLDTDLVKSNHTDLVTGKKQGNIYHRPTLGKCFRCGQTGHLSNECPHRKII

Query:  NMV-EEDVLQEDSSEEIVDDIDYTVPDEG
         +V ++D+L+ D      DD  Y  PDEG
Subjt:  NMV-EEDVLQEDSSEEIVDDIDYTVPDEG

XP_031741035.1 uncharacterized protein LOC116403692 [Cucumis sativus]3.8e-8251.8Show/hide
Query:  RQNEFNADSSSEEEEELLAFEGD-RFGRYPN--PHRNQDSNEYKMKIDLPTFNGKMDIEGFLDWVKNVENFFGYMGTLEHKKVRLVALKLKGGASAWWDQ
        ++ + +  SS +E+  +  F  + R GR       R  + ++YKMKIDLP ++GK +IE FLDW+K+ ENFF YM T E KKV LVALKL+ GASAWWDQ
Subjt:  RQNEFNADSSSEEEEELLAFEGD-RFGRYPN--PHRNQDSNEYKMKIDLPTFNGKMDIEGFLDWVKNVENFFGYMGTLEHKKVRLVALKLKGGASAWWDQ

Query:  LEINRHRYGKKPIRSWERMKKFMRERFLPVNFEQILYNQYQNCRQGSRSIADYSEEFHRLGARTNLLEGQQHLVARFIGGLRSDIKEQIALQPIGYLNEV
        LEINR R GK+P+RSWE+MKK ++ RFLP N+EQ LYNQYQNCRQG RS+A+Y EEFHRL ARTNL E +QH VARF+GGLR DIKE++ LQP  +L+E 
Subjt:  LEINRHRYGKKPIRSWERMKKFMRERFLPVNFEQILYNQYQNCRQGSRSIADYSEEFHRLGARTNLLEGQQHLVARFIGGLRSDIKEQIALQPIGYLNEV

Query:  ISTATTIEEQVGNRFKKQYTRRTNWEQGGTSKKPTSTSDNISSPNRTIPTTKGKTLDTDLVKSNHTDLVTGKKQG-NIYHRPTLGKCFRCGQTGHLSNEC
        IS A T+EE +  R  K   RR+ WE   T  K   T+D  S+  +     KGK +D   V        T K  G N Y RP+LGKCFRCGQTGHLS+ C
Subjt:  ISTATTIEEQVGNRFKKQYTRRTNWEQGGTSKKPTSTSDNISSPNRTIPTTKGKTLDTDLVKSNHTDLVTGKKQG-NIYHRPTLGKCFRCGQTGHLSNEC

Query:  PHRKIINMVEEDVLQEDSSEEIVDDIDYTVPDEG
        P RK I + EE     + S E  ++ +    D+G
Subjt:  PHRKIINMVEEDVLQEDSSEEIVDDIDYTVPDEG

XP_031743026.1 uncharacterized protein LOC116404533 [Cucumis sativus]6.6e-8251.8Show/hide
Query:  RQNEFNADSSSEEEEELLAFEGD-RFGRYPN--PHRNQDSNEYKMKIDLPTFNGKMDIEGFLDWVKNVENFFGYMGTLEHKKVRLVALKLKGGASAWWDQ
        ++ + +  SS +E+  +  F  + R GR       R  + ++YKMKIDLP + GK +IE FLDW+K+ ENFF YM T E KKV LVALKL+ GASAWWDQ
Subjt:  RQNEFNADSSSEEEEELLAFEGD-RFGRYPN--PHRNQDSNEYKMKIDLPTFNGKMDIEGFLDWVKNVENFFGYMGTLEHKKVRLVALKLKGGASAWWDQ

Query:  LEINRHRYGKKPIRSWERMKKFMRERFLPVNFEQILYNQYQNCRQGSRSIADYSEEFHRLGARTNLLEGQQHLVARFIGGLRSDIKEQIALQPIGYLNEV
        LEINR R GK+P+RSWE+MKK ++ RFLP N+EQ LYNQYQNCRQG R++A+Y EEFHRL ARTNL E +QH VARF+GGLR DIKE++ LQP  +L+E 
Subjt:  LEINRHRYGKKPIRSWERMKKFMRERFLPVNFEQILYNQYQNCRQGSRSIADYSEEFHRLGARTNLLEGQQHLVARFIGGLRSDIKEQIALQPIGYLNEV

Query:  ISTATTIEEQVGNRFKKQYTRRTNWEQGGTSKKPTSTSDNISSPNRTIPTTKGKTLDTDLVKSNHTDLVTGKKQG-NIYHRPTLGKCFRCGQTGHLSNEC
        IS A T+EE +  R  K   RR+ WE   T  K   T+D  S+  +     KGK +D   V        T K  G N Y RP+LGKCFRCGQTGHLSN C
Subjt:  ISTATTIEEQVGNRFKKQYTRRTNWEQGGTSKKPTSTSDNISSPNRTIPTTKGKTLDTDLVKSNHTDLVTGKKQG-NIYHRPTLGKCFRCGQTGHLSNEC

Query:  PHRKIINMVEEDVLQEDSSEEIVDDIDYTVPDEG
        P RK I + EE     + S E  ++ +    D+G
Subjt:  PHRKIINMVEEDVLQEDSSEEIVDDIDYTVPDEG

XP_031745523.1 uncharacterized protein LOC116405899 [Cucumis sativus]9.5e-8154.3Show/hide
Query:  MKIDLPTFNGKMDIEGFLDWVKNVENFFGYMGTLEHKKVRLVALKLKGGASAWWDQLEINRHRYGKKPIRSWERMKKFMRERFLPVNFEQILYNQYQNCR
        MK+DLP+++GK DIE FLDW+K+ ENFF YM T E KKVRLVALKLKGGASAWW+QLE+NR R  K+P+RSWE+MKK ++ RFLP N+EQ LYNQYQNCR
Subjt:  MKIDLPTFNGKMDIEGFLDWVKNVENFFGYMGTLEHKKVRLVALKLKGGASAWWDQLEINRHRYGKKPIRSWERMKKFMRERFLPVNFEQILYNQYQNCR

Query:  QGSRSIADYSEEFHRLGARTNLLEGQQHLVARFIGGLRSDIKEQIALQPIGYLNEVISTATTIEEQVGNRFKKQYTRRTNWEQGGTSKKPTSTSDNISSP
        QG+R++ +Y EEFHRL ARTNL E +QH +ARF+GGLR DIKE++ LQP+ +L+E IS A T+EE +  +  K   RRT WE   T KK + TS     P
Subjt:  QGSRSIADYSEEFHRLGARTNLLEGQQHLVARFIGGLRSDIKEQIALQPIGYLNEVISTATTIEEQVGNRFKKQYTRRTNWEQGGTSKKPTSTSDNISSP

Query:  NRTIPTTKGKTLDTD-LVKSNHTDLVTGKKQGNIYHRPTLGKCFRCGQTGHLSNECPHRKIINMVEED--VLQEDSSE--EIVDDIDYTVPDEGSGLFLN
           I   KGK  D+         +++   K  N Y RP+LGKCFRCGQ GHLSN CP RK I + EE+  +  ED SE  E  ++I+    D+   L + 
Subjt:  NRTIPTTKGKTLDTD-LVKSNHTDLVTGKKQGNIYHRPTLGKCFRCGQTGHLSNECPHRKIINMVEED--VLQEDSSE--EIVDDIDYTVPDEGSGLFLN

Query:  VS
         S
Subjt:  VS

TrEMBL top hitse value%identityAlignment
A0A5B7BER3 Uncharacterized protein2.2e-6742.99Show/hide
Query:  RQNEFNADSSSEEEEELLAFEGDR-FGRYPNPHRNQDSNEYKMKIDLPTFNGKMDIEGFLDWVKNVENFFGYMGTLEHKKVRLVALKLKGGASAWWDQLE
        R+N     ++S+ +EE   F  DR +GR P   R Q++ EY+MKIDLP+FNG + IE FLDW+  VE FF  M   + K+V+LVA KLKGGASAWWDQ++
Subjt:  RQNEFNADSSSEEEEELLAFEGDR-FGRYPNPHRNQDSNEYKMKIDLPTFNGKMDIEGFLDWVKNVENFFGYMGTLEHKKVRLVALKLKGGASAWWDQLE

Query:  INRHRYGKKPIRSWERMKKFMRERFLPVNFEQILYNQYQNCRQGSRSIADYSEEFHRLGARTNLLEGQQHLVARFIGGLRSDIKEQIALQPIGYLNEVIS
         NR R GK+P+R+W++M++ +RERFLPV++EQ+LY QYQNCRQG RS+++YS+EF+ L +R NL E +   VAR++GGLR+ I++Q+ L+ I  LNE  S
Subjt:  INRHRYGKKPIRSWERMKKFMRERFLPVNFEQILYNQYQNCRQGSRSIADYSEEFHRLGARTNLLEGQQHLVARFIGGLRSDIKEQIALQPIGYLNEVIS

Query:  TATTIEEQVGNR-FKKQYTRRTNWEQGGTSKKPTSTSDN-ISSPNRTIPTTKGKTLDTDLVKSNHTDLVTGKKQGNIYHRPTLGKCFRCGQTGHLSNECP
         A  +E Q   +  + Q + R+  +     +      +  +  P +  P  +  +      K+ +T +   +K  N Y RP  GKCFRC Q GH SNECP
Subjt:  TATTIEEQVGNR-FKKQYTRRTNWEQGGTSKKPTSTSDN-ISSPNRTIPTTKGKTLDTDLVKSNHTDLVTGKKQGNIYHRPTLGKCFRCGQTGHLSNECP

Query:  HRKIINMVEEDVLQEDSSEEIVDDIDYTVPDEGSG
        +R+ +NMV    + ED+S +  ++ +    DE  G
Subjt:  HRKIINMVEEDVLQEDSSEEIVDDIDYTVPDEGSG

A0A5D3DGR0 Reverse transcriptase2.3e-8047.19Show/hide
Query:  IEQPSILSPRSSTERLL---SRQNEFNADSSSEEEEELLAFEGDRFGRYPNPHRNQDSNEYKMKIDLPTFNGKMDIEGFLDWVKNVENFFGYMGTLEHKK
        I +   L P+   +R +   +R+ E    SSSEE +     E  R     N  + ++++EYKMKIDLP+++GK +IE FLDW+KN ENFF YMGT ++KK
Subjt:  IEQPSILSPRSSTERLL---SRQNEFNADSSSEEEEELLAFEGDRFGRYPNPHRNQDSNEYKMKIDLPTFNGKMDIEGFLDWVKNVENFFGYMGTLEHKK

Query:  VRLVALKLKGGASAWWDQLEINRHRYGKKPIRSWERMKKFMRERFLPVNFEQILYNQYQNCRQGSRSIADYSEEFHRLGARTNLLEGQQHLVARFIGGLR
        V LVALKLKGGASAWWDQ+ +NR + GK PIRSWE+MKK M++RF+P N+EQ LY QYQNCRQG R  A+Y EEFHRLG RTNL+EG++HL++ F+GGLR
Subjt:  VRLVALKLKGGASAWWDQLEINRHRYGKKPIRSWERMKKFMRERFLPVNFEQILYNQYQNCRQGSRSIADYSEEFHRLGARTNLLEGQQHLVARFIGGLR

Query:  SDIKEQIALQPIGYLNEVISTATTIEEQVGNRFKKQYTRRTNWEQGGTSKKPTSTSDNISSPNRTIPTTKGKTLDTDLVKSNHTDLVTGKKQG-NIYHRP
         D+KE++ LQP  +L+E I+ A T+EE + NR K   TR+  WE    SKK T+ +  + +     P  + ++       S   ++  G+K+G N Y RP
Subjt:  SDIKEQIALQPIGYLNEVISTATTIEEQVGNRFKKQYTRRTNWEQGGTSKKPTSTSDNISSPNRTIPTTKGKTLDTDLVKSNHTDLVTGKKQG-NIYHRP

Query:  TLGKCFRCGQTGHLSNECPHRKIINMVEE-DVLQEDSSEEIVDDIDYTVPDEGSGL
          G C+RCGQ GH SN+CP RK I + ++ D     S  E  ++ +    DEG  L
Subjt:  TLGKCFRCGQTGHLSNECPHRKIINMVEE-DVLQEDSSEEIVDDIDYTVPDEGSGL

A0A5D3DJC1 Transposon Ty3-G Gag-Pol polyprotein7.3e-7148.85Show/hide
Query:  ERLLSRQNEFNADSSSEEEEELLAFEGDRFGRYPNPHRNQDSNEYKMKIDLPTFNGKMDIEGFLDWVKNVENFFGYMGTLEHKKVRLVALKLKGGASAWW
        E+ +    + N+DSS E+    +  E  R G    P+ NQ+  E +MK+DLPTFNG+MD+E FLDW+KNVENFF Y    EHKKV+LVALKL+GGASAWW
Subjt:  ERLLSRQNEFNADSSSEEEEELLAFEGDRFGRYPNPHRNQDSNEYKMKIDLPTFNGKMDIEGFLDWVKNVENFFGYMGTLEHKKVRLVALKLKGGASAWW

Query:  DQLEINRHRYGKKPIRSWERMKKFMRERFLPVNFEQILYNQYQNCRQGSRSIADYSEEFHRLGARTNLLEGQQHLVARFIGGLRSDIKEQIALQPIGYLN
        DQL+ NR  +GK+P+RSW +M + M++RFLP+N++Q+LYNQYQ C QG RSI DY+EEF+RLGAR+NL E +   ++R I GL+ +IK+ + L  + +L 
Subjt:  DQLEINRHRYGKKPIRSWERMKKFMRERFLPVNFEQILYNQYQNCRQGSRSIADYSEEFHRLGARTNLLEGQQHLVARFIGGLRSDIKEQIALQPIGYLN

Query:  EVISTATTIEEQVGNRFKKQYTRRTNWEQGGTSKKPTSTSDNI---SSPNRTIPTTKGKTLDTDLVKSNHTDLVTGKKQGNIYHRPTLGKCFRCGQTGHL
        + IS A+ IE+    +  K   R+ NW++      PT++  N    SS + + PT K + L      +   ++ T KK  N+Y RPTLGKCF+CGQ GHL
Subjt:  EVISTATTIEEQVGNRFKKQYTRRTNWEQGGTSKKPTSTSDNI---SSPNRTIPTTKGKTLDTDLVKSNHTDLVTGKKQGNIYHRPTLGKCFRCGQTGHL

Query:  SNECP
        SNECP
Subjt:  SNECP

A0A6J1CAS9 uncharacterized protein LOC111009540 isoform X13.8e-7549.24Show/hide
Query:  EFNADSSSEEEEELLAFEGDRFGRYPN-PHRNQDSNEYKMKIDLPTFNGKMDIEGFLDWVKNVENFFGYMGTLEHKKVRLVALKLKGGASAWWDQLEINR
        E + DS + + +E    +  RF R  +   R     ++KMKIDLPTFNGKMD+E FLD VKNVENFF Y  T E KKV+LVA K++ GASAWWDQLEIN 
Subjt:  EFNADSSSEEEEELLAFEGDRFGRYPN-PHRNQDSNEYKMKIDLPTFNGKMDIEGFLDWVKNVENFFGYMGTLEHKKVRLVALKLKGGASAWWDQLEINR

Query:  HRYGKKPIRSWERMKKFMRERFLPVNFEQILYNQYQNCRQGSRSIADYSEEFHRLGARTNLLEGQQHLVARFIGGLRSDIKEQIALQPIGYLNEVISTAT
         R GK+PIRSW RM + MRERFLP NFEQ+LY  YQ CRQG ++IADY+E FHRLGA+TN+ E + + +ARF+ GLR DI++Q+ +QPI  L + I  AT
Subjt:  HRYGKKPIRSWERMKKFMRERFLPVNFEQILYNQYQNCRQGSRSIADYSEEFHRLGARTNLLEGQQHLVARFIGGLRSDIKEQIALQPIGYLNEVISTAT

Query:  TIEEQVGNRFKKQYTRRTNWEQGGTSKKPTSTSDNISSPNRTIPTTKGKTLDTDLVKSNHTDLVTGKKQGNIYHRPTLGKCFRCGQTGHLSNECPHRKII
         IE++   +  +   RRT W++   SK  T+ +        T  +T     D        T   + K+  N Y RPTLGKCFRCGQ  HLSNECP R+ +
Subjt:  TIEEQVGNRFKKQYTRRTNWEQGGTSKKPTSTSDNISSPNRTIPTTKGKTLDTDLVKSNHTDLVTGKKQGNIYHRPTLGKCFRCGQTGHLSNECPHRKII

Query:  NMV-EEDVLQEDSSEEIVDDIDYTVPDEG
         +V ++D+L+ D      DD  Y  PDEG
Subjt:  NMV-EEDVLQEDSSEEIVDDIDYTVPDEG

A0A6J1CCQ8 uncharacterized protein LOC111009540 isoform X23.8e-7549.24Show/hide
Query:  EFNADSSSEEEEELLAFEGDRFGRYPN-PHRNQDSNEYKMKIDLPTFNGKMDIEGFLDWVKNVENFFGYMGTLEHKKVRLVALKLKGGASAWWDQLEINR
        E + DS + + +E    +  RF R  +   R     ++KMKIDLPTFNGKMD+E FLD VKNVENFF Y  T E KKV+LVA K++ GASAWWDQLEIN 
Subjt:  EFNADSSSEEEEELLAFEGDRFGRYPN-PHRNQDSNEYKMKIDLPTFNGKMDIEGFLDWVKNVENFFGYMGTLEHKKVRLVALKLKGGASAWWDQLEINR

Query:  HRYGKKPIRSWERMKKFMRERFLPVNFEQILYNQYQNCRQGSRSIADYSEEFHRLGARTNLLEGQQHLVARFIGGLRSDIKEQIALQPIGYLNEVISTAT
         R GK+PIRSW RM + MRERFLP NFEQ+LY  YQ CRQG ++IADY+E FHRLGA+TN+ E + + +ARF+ GLR DI++Q+ +QPI  L + I  AT
Subjt:  HRYGKKPIRSWERMKKFMRERFLPVNFEQILYNQYQNCRQGSRSIADYSEEFHRLGARTNLLEGQQHLVARFIGGLRSDIKEQIALQPIGYLNEVISTAT

Query:  TIEEQVGNRFKKQYTRRTNWEQGGTSKKPTSTSDNISSPNRTIPTTKGKTLDTDLVKSNHTDLVTGKKQGNIYHRPTLGKCFRCGQTGHLSNECPHRKII
         IE++   +  +   RRT W++   SK  T+ +        T  +T     D        T   + K+  N Y RPTLGKCFRCGQ  HLSNECP R+ +
Subjt:  TIEEQVGNRFKKQYTRRTNWEQGGTSKKPTSTSDNISSPNRTIPTTKGKTLDTDLVKSNHTDLVTGKKQGNIYHRPTLGKCFRCGQTGHLSNECPHRKII

Query:  NMV-EEDVLQEDSSEEIVDDIDYTVPDEG
         +V ++D+L+ D      DD  Y  PDEG
Subjt:  NMV-EEDVLQEDSSEEIVDDIDYTVPDEG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G40129.1 unknown protein8.2e-0631.88Show/hide
Query:  EGFLDWVKNVENFFGYMGTLEHKKVRLVALKLKGGASAWWDQLEINRHRYGKKPIRSWERMKKFMRERF
        E +L+W KN++ +F Y   L   +       L G A  WW Q   +R  Y + PI  W  +K+F+R ++
Subjt:  EGFLDWVKNVENFFGYMGTLEHKKVRLVALKLKGGASAWWDQLEINRHRYGKKPIRSWERMKKFMRERF

AT1G47350.1 F-box associated ubiquitination effector family protein8.2e-0632.89Show/hide
Query:  LYNQYQNCRQGSRSIADYSEEFHRLGARTNLLEGQQHLVARFIGGLRSDIKEQIALQPIGYLNEVISTATTIEEQV
        +YN+ QN R  +RS+ +Y+EEF+ L    ++ + Q  LV+R IG LRS ++  ++      ++E    A + E+Q+
Subjt:  LYNQYQNCRQGSRSIADYSEEFHRLGARTNLLEGQQHLVARFIGGLRSDIKEQIALQPIGYLNEVISTATTIEEQV

AT2G15180.1 Zinc knuckle (CCHC-type) family protein4.6e-0938.57Show/hide
Query:  GFLDWVKNVENFFGYMGTLEHKKVRLVALKLKGGASAWWDQLEINRHRYGKKPIRSWERMKKFMRERFLP
        G+L W  N+  +F +  T +  K+ +   +LKG A  WWDQ E NR    + PIR+WER+K  M  ++ P
Subjt:  GFLDWVKNVENFFGYMGTLEHKKVRLVALKLKGGASAWWDQLEINRHRYGKKPIRSWERMKKFMRERFLP

AT4G07350.1 unknown protein8.2e-0629.89Show/hide
Query:  NEYKMKIDLPTFNGKMDIEGFLDWVKNVENFFGYMGTLEHKKVRLVALKLKGGASAWWDQLEINRHRYGKKPIRSWERMKKFMRERF
        ++YK       F+GK   E +L+W KN++ +F Y   L   +       L G A  WW Q   +R  Y + PI  W  +K+ +R ++
Subjt:  NEYKMKIDLPTFNGKMDIEGFLDWVKNVENFFGYMGTLEHKKVRLVALKLKGGASAWWDQLEINRHRYGKKPIRSWERMKKFMRERF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAGGAAAGAAGTTGATCACCGGTGACTCTTCCCTCATCAACAAAGAAATTGAGCAGCCCTCCATTCTCTCGCCACGATCGTCAACCGAACGCTTGCTGTCG
CGGCAGAATGAGTTCAATGCGGATTCTTCCAGCGAGGAGGAGGAAGAACTACTTGCCTTTGAAGGTGACAGGTTTGGTAGATATCCTAACCCACATAGAAACCAA
GATAGTAATGAATACAAGATGAAAATTGATCTACCTACCTTTAATGGTAAAATGGATATTGAAGGGTTTCTTGATTGGGTAAAGAATGTCGAAAATTTTTTTGGT
TACATGGGAACACTTGAACATAAGAAGGTAAGACTTGTAGCGTTAAAACTCAAAGGAGGAGCTTCGGCGTGGTGGGATCAGCTGGAAATCAATAGACATCGTTAT
GGTAAAAAACCCATTCGAAGTTGGGAACGCATGAAGAAATTCATGCGGGAACGCTTCCTTCCTGTTAATTTTGAACAAATTTTATATAATCAGTATCAAAATTGT
AGACAGGGATCCCGATCTATTGCTGACTATTCTGAAGAATTTCACCGCTTGGGAGCTCGAACAAATCTATTGGAAGGACAACAACATCTTGTGGCAAGATTCATT
GGGGGATTACGCTCGGATATTAAAGAACAGATCGCCCTCCAACCAATAGGTTATTTAAATGAGGTCATCTCTACGGCCACAACAATTGAGGAACAAGTTGGAAAT
CGATTCAAAAAACAGTACACCCGAAGGACCAATTGGGAACAAGGTGGAACCTCCAAGAAGCCTACTTCGACGAGTGACAACATTTCCTCTCCCAACCGTACCATT
CCTACGACAAAAGGTAAAACTCTGGACACTGATTTAGTCAAATCTAACCACACTGATTTGGTGACAGGAAAGAAACAGGGCAATATATACCATCGCCCTACATTA
GGGAAATGTTTTAGGTGTGGACAAACCGGTCATTTATCCAATGAATGTCCGCACCGTAAGATAATCAATATGGTCGAAGAGGATGTCCTACAAGAGGACAGCAGT
GAGGAAATTGTTGATGATATTGATTATACGGTACCAGACGAAGGTTCTGGTCTATTTTTGAATGTTTCCGAAACATCTCTTATAGAGGAGTCTTCTTGGGCTCAA
CAGGATCGGGTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTAGGAAAGAAGTTGATCACCGGTGACTCTTCCCTCATCAACAAAGAAATTGAGCAGCCCTCCATTCTCTCGCCACGATCGTCAACCGAACGCTTGCTGTCG
CGGCAGAATGAGTTCAATGCGGATTCTTCCAGCGAGGAGGAGGAAGAACTACTTGCCTTTGAAGGTGACAGGTTTGGTAGATATCCTAACCCACATAGAAACCAA
GATAGTAATGAATACAAGATGAAAATTGATCTACCTACCTTTAATGGTAAAATGGATATTGAAGGGTTTCTTGATTGGGTAAAGAATGTCGAAAATTTTTTTGGT
TACATGGGAACACTTGAACATAAGAAGGTAAGACTTGTAGCGTTAAAACTCAAAGGAGGAGCTTCGGCGTGGTGGGATCAGCTGGAAATCAATAGACATCGTTAT
GGTAAAAAACCCATTCGAAGTTGGGAACGCATGAAGAAATTCATGCGGGAACGCTTCCTTCCTGTTAATTTTGAACAAATTTTATATAATCAGTATCAAAATTGT
AGACAGGGATCCCGATCTATTGCTGACTATTCTGAAGAATTTCACCGCTTGGGAGCTCGAACAAATCTATTGGAAGGACAACAACATCTTGTGGCAAGATTCATT
GGGGGATTACGCTCGGATATTAAAGAACAGATCGCCCTCCAACCAATAGGTTATTTAAATGAGGTCATCTCTACGGCCACAACAATTGAGGAACAAGTTGGAAAT
CGATTCAAAAAACAGTACACCCGAAGGACCAATTGGGAACAAGGTGGAACCTCCAAGAAGCCTACTTCGACGAGTGACAACATTTCCTCTCCCAACCGTACCATT
CCTACGACAAAAGGTAAAACTCTGGACACTGATTTAGTCAAATCTAACCACACTGATTTGGTGACAGGAAAGAAACAGGGCAATATATACCATCGCCCTACATTA
GGGAAATGTTTTAGGTGTGGACAAACCGGTCATTTATCCAATGAATGTCCGCACCGTAAGATAATCAATATGGTCGAAGAGGATGTCCTACAAGAGGACAGCAGT
GAGGAAATTGTTGATGATATTGATTATACGGTACCAGACGAAGGTTCTGGTCTATTTTTGAATGTTTCCGAAACATCTCTTATAGAGGAGTCTTCTTGGGCTCAA
CAGGATCGGGTGTAA
Protein sequenceShow/hide protein sequence
MVGKKLITGDSSLINKEIEQPSILSPRSSTERLLSRQNEFNADSSSEEEEELLAFEGDRFGRYPNPHRNQDSNEYKMKIDLPTFNGKMDIEGFLDWVKNVENFFG
YMGTLEHKKVRLVALKLKGGASAWWDQLEINRHRYGKKPIRSWERMKKFMRERFLPVNFEQILYNQYQNCRQGSRSIADYSEEFHRLGARTNLLEGQQHLVARFI
GGLRSDIKEQIALQPIGYLNEVISTATTIEEQVGNRFKKQYTRRTNWEQGGTSKKPTSTSDNISSPNRTIPTTKGKTLDTDLVKSNHTDLVTGKKQGNIYHRPTL
GKCFRCGQTGHLSNECPHRKIINMVEEDVLQEDSSEEIVDDIDYTVPDEGSGLFLNVSETSLIEESSWAQQDRV