; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc04g33510 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g33510
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionC2 NT-type domain-containing protein
Genome locationchr4:25248498..25249614
RNA-Seq ExpressionMoc04g33510
SyntenyMoc04g33510
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EEF28304.1 DNA repair protein RAD50, putative [Ricinus communis]1.4e-0432.35Show/hide
Query:  MKLAEDASLIVEEMNVDYDDMEGKKLDVFDNPFIRNVGSSSVGRQPSEQGTFIFPQLYDTVRFWHNPHSFTFGFTQKEVALVPSRVLLEEKIFPRGKLSG
        ++++  ++  +E++NVD DD+E K  DV DN   +++GSSS     S   +     L     F  +   ++F  T   +          E   P   L+G
Subjt:  MKLAEDASLIVEEMNVDYDDMEGKKLDVFDNPFIRNVGSSSVGRQPSEQGTFIFPQLYDTVRFWHNPHSFTFGFTQKEVALVPSRVLLEEKIFPRGKLSG

Query:  VSKDSAERQEDFSGTQDSNSGYHSFNGSTRSNHSSSASQVATSDSQVENQGEESDQVS-VVGVSALHNSG
        +  +   RQ D +G+Q+S+ G +SFN S+RSN SS  S+V  S S ++ Q +E +QVS  V  S L N+G
Subjt:  VSKDSAERQEDFSGTQDSNSGYHSFNGSTRSNHSSSASQVATSDSQVENQGEESDQVS-VVGVSALHNSG

XP_015583817.1 CAP-Gly domain-containing linker protein 1 isoform X1 [Ricinus communis]1.1e-0433.53Show/hide
Query:  AEDASLIVEEMNVDYDDMEGKKLDVFDNPFIRNVGSSSVGRQPSEQGTFIFPQLYDTVRFWHNPHSFTFGFTQKEVALVPSRVLLEEKIFPRGKLSGVSK
        +E+    +E++NVD DD+E K  DV DN   +++GSSS     S   +     L     F  +   ++F  T   +          E   P   L+G+  
Subjt:  AEDASLIVEEMNVDYDDMEGKKLDVFDNPFIRNVGSSSVGRQPSEQGTFIFPQLYDTVRFWHNPHSFTFGFTQKEVALVPSRVLLEEKIFPRGKLSGVSK

Query:  DSAERQEDFSGTQDSNSGYHSFNGSTRSNHSSSASQVATSDSQVENQGEESDQVS-VVGVSALHNSG
        +   RQ D +G+Q+S+ G +SFN S+RSN SS  S+V  S S ++ Q +E +QVS  V  S L N+G
Subjt:  DSAERQEDFSGTQDSNSGYHSFNGSTRSNHSSSASQVATSDSQVENQGEESDQVS-VVGVSALHNSG

XP_015583818.1 myosin-4 isoform X2 [Ricinus communis]1.1e-0433.53Show/hide
Query:  AEDASLIVEEMNVDYDDMEGKKLDVFDNPFIRNVGSSSVGRQPSEQGTFIFPQLYDTVRFWHNPHSFTFGFTQKEVALVPSRVLLEEKIFPRGKLSGVSK
        +E+    +E++NVD DD+E K  DV DN   +++GSSS     S   +     L     F  +   ++F  T   +          E   P   L+G+  
Subjt:  AEDASLIVEEMNVDYDDMEGKKLDVFDNPFIRNVGSSSVGRQPSEQGTFIFPQLYDTVRFWHNPHSFTFGFTQKEVALVPSRVLLEEKIFPRGKLSGVSK

Query:  DSAERQEDFSGTQDSNSGYHSFNGSTRSNHSSSASQVATSDSQVENQGEESDQVS-VVGVSALHNSG
        +   RQ D +G+Q+S+ G +SFN S+RSN SS  S+V  S S ++ Q +E +QVS  V  S L N+G
Subjt:  DSAERQEDFSGTQDSNSGYHSFNGSTRSNHSSSASQVATSDSQVENQGEESDQVS-VVGVSALHNSG

XP_021625802.1 restin homolog isoform X1 [Manihot esculenta]4.1e-0433.73Show/hide
Query:  EDASLIVEEMNVDYDDMEGKKLDVFDNPFIRNVGSSSVGRQPSEQGTFIFPQLYDTVRFWHNPHSFTFGFTQKEVALVPSRVLLEEKIFPRGKLSGVSKD
        ED    VE+ N+DYDD+E K  DV D+   ++VGSSS     S+  +F             +     + F +  +          E   PR  L+G S  
Subjt:  EDASLIVEEMNVDYDDMEGKKLDVFDNPFIRNVGSSSVGRQPSEQGTFIFPQLYDTVRFWHNPHSFTFGFTQKEVALVPSRVLLEEKIFPRGKLSGVSKD

Query:  SAERQEDFSGTQDSNSGYHSFNGSTRSNHSSSASQVATSDSQVENQGEESDQVS-VVGVSALHNSG
        +  RQ+       S  G +SFN S+RS HSS  S+V+TS S  +NQ  + +QVS  V  S L N+G
Subjt:  SAERQEDFSGTQDSNSGYHSFNGSTRSNHSSSASQVATSDSQVENQGEESDQVS-VVGVSALHNSG

XP_021625803.1 restin homolog isoform X2 [Manihot esculenta]4.1e-0433.73Show/hide
Query:  EDASLIVEEMNVDYDDMEGKKLDVFDNPFIRNVGSSSVGRQPSEQGTFIFPQLYDTVRFWHNPHSFTFGFTQKEVALVPSRVLLEEKIFPRGKLSGVSKD
        ED    VE+ N+DYDD+E K  DV D+   ++VGSSS     S+  +F             +     + F +  +          E   PR  L+G S  
Subjt:  EDASLIVEEMNVDYDDMEGKKLDVFDNPFIRNVGSSSVGRQPSEQGTFIFPQLYDTVRFWHNPHSFTFGFTQKEVALVPSRVLLEEKIFPRGKLSGVSKD

Query:  SAERQEDFSGTQDSNSGYHSFNGSTRSNHSSSASQVATSDSQVENQGEESDQVS-VVGVSALHNSG
        +  RQ+       S  G +SFN S+RS HSS  S+V+TS S  +NQ  + +QVS  V  S L N+G
Subjt:  SAERQEDFSGTQDSNSGYHSFNGSTRSNHSSSASQVATSDSQVENQGEESDQVS-VVGVSALHNSG

TrEMBL top hitse value%identityAlignment
A0A2C9V3M8 C2 NT-type domain-containing protein2.0e-0433.73Show/hide
Query:  EDASLIVEEMNVDYDDMEGKKLDVFDNPFIRNVGSSSVGRQPSEQGTFIFPQLYDTVRFWHNPHSFTFGFTQKEVALVPSRVLLEEKIFPRGKLSGVSKD
        ED    VE+ N+DYDD+E K  DV D+   ++VGSSS     S+  +F             +     + F +  +          E   PR  L+G S  
Subjt:  EDASLIVEEMNVDYDDMEGKKLDVFDNPFIRNVGSSSVGRQPSEQGTFIFPQLYDTVRFWHNPHSFTFGFTQKEVALVPSRVLLEEKIFPRGKLSGVSKD

Query:  SAERQEDFSGTQDSNSGYHSFNGSTRSNHSSSASQVATSDSQVENQGEESDQVS-VVGVSALHNSG
        +  RQ+       S  G +SFN S+RS HSS  S+V+TS S  +NQ  + +QVS  V  S L N+G
Subjt:  SAERQEDFSGTQDSNSGYHSFNGSTRSNHSSSASQVATSDSQVENQGEESDQVS-VVGVSALHNSG

B9T762 DNA repair protein RAD50, putative6.8e-0532.35Show/hide
Query:  MKLAEDASLIVEEMNVDYDDMEGKKLDVFDNPFIRNVGSSSVGRQPSEQGTFIFPQLYDTVRFWHNPHSFTFGFTQKEVALVPSRVLLEEKIFPRGKLSG
        ++++  ++  +E++NVD DD+E K  DV DN   +++GSSS     S   +     L     F  +   ++F  T   +          E   P   L+G
Subjt:  MKLAEDASLIVEEMNVDYDDMEGKKLDVFDNPFIRNVGSSSVGRQPSEQGTFIFPQLYDTVRFWHNPHSFTFGFTQKEVALVPSRVLLEEKIFPRGKLSG

Query:  VSKDSAERQEDFSGTQDSNSGYHSFNGSTRSNHSSSASQVATSDSQVENQGEESDQVS-VVGVSALHNSG
        +  +   RQ D +G+Q+S+ G +SFN S+RSN SS  S+V  S S ++ Q +E +QVS  V  S L N+G
Subjt:  VSKDSAERQEDFSGTQDSNSGYHSFNGSTRSNHSSSASQVATSDSQVENQGEESDQVS-VVGVSALHNSG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAACTCGCAGAGGACGCGAGTTTGATTGTGGAGGAGATGAATGTTGATTATGATGACATGGAGGGAAAAAAGTTAGATGTATTTGATAATCCATTTATCAGAAATGT
AGGGTCTTCATCGGTTGGGAGGCAGCCGTCCGAACAAGGGACCTTTATATTCCCACAATTGTATGATACTGTCCGCTTTTGGCATAACCCTCACAGCTTTACTTTTGGTT
TCACCCAAAAGGAAGTGGCTTTGGTTCCATCAAGGGTTCTTTTGGAAGAGAAGATCTTTCCAAGAGGCAAATTGAGTGGGGTCTCAAAAGATTCTGCAGAAAGACAAGAA
GATTTCAGTGGCACTCAAGACAGCAATTCTGGATACCATTCATTTAATGGATCTACAAGATCAAACCATTCATCATCTGCCTCACAAGTTGCCACCTCTGACAGCCAAGT
CGAAAATCAAGGAGAAGAGTCGGATCAAGTTTCGGTTGTTGGAGTATCTGCTCTACATAATTCTGGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAACTCGCAGAGGACGCGAGTTTGATTGTGGAGGAGATGAATGTTGATTATGATGACATGGAGGGAAAAAAGTTAGATGTATTTGATAATCCATTTATCAGAAATGT
AGGGTCTTCATCGGTTGGGAGGCAGCCGTCCGAACAAGGGACCTTTATATTCCCACAATTGTATGATACTGTCCGCTTTTGGCATAACCCTCACAGCTTTACTTTTGGTT
TCACCCAAAAGGAAGTGGCTTTGGTTCCATCAAGGGTTCTTTTGGAAGAGAAGATCTTTCCAAGAGGCAAATTGAGTGGGGTCTCAAAAGATTCTGCAGAAAGACAAGAA
GATTTCAGTGGCACTCAAGACAGCAATTCTGGATACCATTCATTTAATGGATCTACAAGATCAAACCATTCATCATCTGCCTCACAAGTTGCCACCTCTGACAGCCAAGT
CGAAAATCAAGGAGAAGAGTCGGATCAAGTTTCGGTTGTTGGAGTATCTGCTCTACATAATTCTGGTTAA
Protein sequenceShow/hide protein sequence
MKLAEDASLIVEEMNVDYDDMEGKKLDVFDNPFIRNVGSSSVGRQPSEQGTFIFPQLYDTVRFWHNPHSFTFGFTQKEVALVPSRVLLEEKIFPRGKLSGVSKDSAERQE
DFSGTQDSNSGYHSFNGSTRSNHSSSASQVATSDSQVENQGEESDQVSVVGVSALHNSG