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Moc04g33850 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g33850
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionPhenylalanine ammonia-lyase
Genome locationchr4:25523073..25523814
RNA-Seq ExpressionMoc04g33850
SyntenyMoc04g33850
Gene Ontology termsGO:0006559 - L-phenylalanine catabolic process (biological process)
GO:0009800 - cinnamic acid biosynthetic process (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0045548 - phenylalanine ammonia-lyase activity (molecular function)
InterPro domainsIPR001106 - Aromatic amino acid lyase
IPR024083 - Fumarase/histidase, N-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE9461246.1 hypothetical protein C3L33_06849, partial [Rhododendron williamsianum]3.9e-1062.5Show/hide
Query:  SHRDKNGTVGRVDHSLSVCGGVASYWGAAAEGLMGSHFDEVKRMVAEFRRPLVRLGGETLTIAQ
        S ++ NG   +VD   S+C      WGAAAE L GSH DEVKRMV EFRRP+VRLGGE+LTIAQ
Subjt:  SHRDKNGTVGRVDHSLSVCGGVASYWGAAAEGLMGSHFDEVKRMVAEFRRPLVRLGGETLTIAQ

KAG2309224.1 hypothetical protein Bca52824_028972 [Brassica carinata]1.1e-0958.73Show/hide
Query:  GRVDHSLSVCGGVASYWGAAAEGLMGSHFDEVKRMVAEFRRPLVRLGGETLTIAQGNEILILG
        G +  +++V G     WGAAAE + GSH DEVKRMV EFRRP+V LGGETLTI Q   I  LG
Subjt:  GRVDHSLSVCGGVASYWGAAAEGLMGSHFDEVKRMVAEFRRPLVRLGGETLTIAQGNEILILG

XP_004149916.1 phenylalanine ammonia-lyase G4 [Cucumis sativus]3.9e-1061.29Show/hide
Query:  RDKNGTVGRVDHSLSVCGGVASYWGAAAEGLMGSHFDEVKRMVAEFRRPLVRLGGETLTIAQ
        R +NG  G  +   S+C GVA+YW  AA+GL GSH +E KRMV EFRR +VRLGGE+LTIAQ
Subjt:  RDKNGTVGRVDHSLSVCGGVASYWGAAAEGLMGSHFDEVKRMVAEFRRPLVRLGGETLTIAQ

XP_008456500.1 PREDICTED: phenylalanine ammonia-lyase G4 [Cucumis melo]8.4e-1364.52Show/hide
Query:  RDKNGTVGRVDHSLSVCGGVASYWGAAAEGLMGSHFDEVKRMVAEFRRPLVRLGGETLTIAQ
        R +NG  G      S+CGGVA+YW  AA+GL GSH +E KRMV EFRRP+VRLGGE+LTIAQ
Subjt:  RDKNGTVGRVDHSLSVCGGVASYWGAAAEGLMGSHFDEVKRMVAEFRRPLVRLGGETLTIAQ

XP_038883983.1 phenylalanine ammonia-lyase G4-like [Benincasa hispida]1.0e-1060.66Show/hide
Query:  RDKNGTVGRVDHSLSVCGGVASYWGAAAEGLMGSHFDEVKRMVAEFRRPLVRLGGETLTIA
        + +NG +G   +  S+CGGVA+YW  AA GL GSH +E KRMV EFRRP+V+LGGE+LTIA
Subjt:  RDKNGTVGRVDHSLSVCGGVASYWGAAAEGLMGSHFDEVKRMVAEFRRPLVRLGGETLTIA

TrEMBL top hitse value%identityAlignment
A0A0A0KG52 Phenylalanine ammonia-lyase1.9e-1061.29Show/hide
Query:  RDKNGTVGRVDHSLSVCGGVASYWGAAAEGLMGSHFDEVKRMVAEFRRPLVRLGGETLTIAQ
        R +NG  G  +   S+C GVA+YW  AA+GL GSH +E KRMV EFRR +VRLGGE+LTIAQ
Subjt:  RDKNGTVGRVDHSLSVCGGVASYWGAAAEGLMGSHFDEVKRMVAEFRRPLVRLGGETLTIAQ

A0A1J3HDY5 Phenylalanine ammonia-lyase4.2e-1055.56Show/hide
Query:  GRVDHSLSVCGGVASYWGAAAEGLMGSHFDEVKRMVAEFRRPLVRLGGETLTIAQGNEILILG
        G + ++++V G    +WGAAAE + GSH DEVKRMV EFR+P+V LGGETLTI Q   I  +G
Subjt:  GRVDHSLSVCGGVASYWGAAAEGLMGSHFDEVKRMVAEFRRPLVRLGGETLTIAQGNEILILG

A0A1S3C3H3 Phenylalanine ammonia-lyase4.1e-1364.52Show/hide
Query:  RDKNGTVGRVDHSLSVCGGVASYWGAAAEGLMGSHFDEVKRMVAEFRRPLVRLGGETLTIAQ
        R +NG  G      S+CGGVA+YW  AA+GL GSH +E KRMV EFRRP+VRLGGE+LTIAQ
Subjt:  RDKNGTVGRVDHSLSVCGGVASYWGAAAEGLMGSHFDEVKRMVAEFRRPLVRLGGETLTIAQ

A0A5D3BPF6 Phenylalanine ammonia-lyase4.1e-1364.52Show/hide
Query:  RDKNGTVGRVDHSLSVCGGVASYWGAAAEGLMGSHFDEVKRMVAEFRRPLVRLGGETLTIAQ
        R +NG  G      S+CGGVA+YW  AA+GL GSH +E KRMV EFRRP+VRLGGE+LTIAQ
Subjt:  RDKNGTVGRVDHSLSVCGGVASYWGAAAEGLMGSHFDEVKRMVAEFRRPLVRLGGETLTIAQ

A0A6A4LKH3 Phenylalanine ammonia-lyase (Fragment)1.9e-1062.5Show/hide
Query:  SHRDKNGTVGRVDHSLSVCGGVASYWGAAAEGLMGSHFDEVKRMVAEFRRPLVRLGGETLTIAQ
        S ++ NG   +VD   S+C      WGAAAE L GSH DEVKRMV EFRRP+VRLGGE+LTIAQ
Subjt:  SHRDKNGTVGRVDHSLSVCGGVASYWGAAAEGLMGSHFDEVKRMVAEFRRPLVRLGGETLTIAQ

SwissProt top hitse value%identityAlignment
O23865 Phenylalanine ammonia-lyase 14.8e-1176.92Show/hide
Query:  WGAAAEGLMGSHFDEVKRMVAEFRRPLVRLGGETLTIAQ
        WG AAE L GSH DEVKRMVAEFR+P+V+LGGETLT++Q
Subjt:  WGAAAEGLMGSHFDEVKRMVAEFRRPLVRLGGETLTIAQ

P24481 Phenylalanine ammonia-lyase 13.7e-1172.5Show/hide
Query:  YWGAAAEGLMGSHFDEVKRMVAEFRRPLVRLGGETLTIAQ
        YWG AAE + GSH DEVK+MVAE+R+P+V+LGGETLTI+Q
Subjt:  YWGAAAEGLMGSHFDEVKRMVAEFRRPLVRLGGETLTIAQ

P27991 Phenylalanine ammonia-lyase 17.4e-1282.05Show/hide
Query:  WGAAAEGLMGSHFDEVKRMVAEFRRPLVRLGGETLTIAQ
        WGAAAE + GSH DEVKRMVAE+R+P+VRLGGETLTIAQ
Subjt:  WGAAAEGLMGSHFDEVKRMVAEFRRPLVRLGGETLTIAQ

P35510 Phenylalanine ammonia-lyase 12.8e-1170.21Show/hide
Query:  WGAAAEGLMGSHFDEVKRMVAEFRRPLVRLGGETLTIAQGNEILILG
        WGAAAE + GSH DEVKRMVAEFR+P+V LGGETLTI Q   I  +G
Subjt:  WGAAAEGLMGSHFDEVKRMVAEFRRPLVRLGGETLTIAQGNEILILG

P45728 Phenylalanine ammonia-lyase 23.7e-1172.5Show/hide
Query:  YWGAAAEGLMGSHFDEVKRMVAEFRRPLVRLGGETLTIAQ
        YWG AAE + GSH DEVK+MVAE+R+P+V+LGGETLTI+Q
Subjt:  YWGAAAEGLMGSHFDEVKRMVAEFRRPLVRLGGETLTIAQ

Arabidopsis top hitse value%identityAlignment
AT2G37040.1 PHE ammonia lyase 12.0e-1270.21Show/hide
Query:  WGAAAEGLMGSHFDEVKRMVAEFRRPLVRLGGETLTIAQGNEILILG
        WGAAAE + GSH DEVKRMVAEFR+P+V LGGETLTI Q   I  +G
Subjt:  WGAAAEGLMGSHFDEVKRMVAEFRRPLVRLGGETLTIAQGNEILILG

AT3G10340.1 phenylalanine ammonia-lyase 41.2e-0953.85Show/hide
Query:  DHSLSVCGGVASYWGAAAEGLMGSHFDEVKRMVAEFRRPLVRLGGETLTIAQ
        ++ ++   G    W A AE L GSH DEVKRMV E+R+  V+LGGETLTI Q
Subjt:  DHSLSVCGGVASYWGAAAEGLMGSHFDEVKRMVAEFRRPLVRLGGETLTIAQ

AT3G53260.1 phenylalanine ammonia-lyase 21.9e-1061.7Show/hide
Query:  WGAAAEGLMGSHFDEVKRMVAEFRRPLVRLGGETLTIAQGNEILILG
        WG AA+ + GSH DEVK+MV E+RRP+V LGGETLTI Q   I  +G
Subjt:  WGAAAEGLMGSHFDEVKRMVAEFRRPLVRLGGETLTIAQGNEILILG

AT5G04230.1 phenyl alanine ammonia-lyase 31.8e-0854.17Show/hide
Query:  WGAAAEGLMGSHFDEVKRMVAEFRRPLVRLGGETLTIAQGNEILILGP
        W  AAE L GSH +EVK+MV ++R+  V+LGGETLTI Q   +   GP
Subjt:  WGAAAEGLMGSHFDEVKRMVAEFRRPLVRLGGETLTIAQGNEILILGP

AT5G04230.2 phenyl alanine ammonia-lyase 31.8e-0854.17Show/hide
Query:  WGAAAEGLMGSHFDEVKRMVAEFRRPLVRLGGETLTIAQGNEILILGP
        W  AAE L GSH +EVK+MV ++R+  V+LGGETLTI Q   +   GP
Subjt:  WGAAAEGLMGSHFDEVKRMVAEFRRPLVRLGGETLTIAQGNEILILGP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATCCCACCGTGATAAAAACGGCACCGTTGGACGCGTGGATCACTCTTTATCTGTGTGCGGCGGTGTGGCGTCGTACTGGGGCGCCGCGGCGGAGGGCCTCATGGG
GAGCCATTTTGACGAGGTCAAACGCATGGTCGCAGAGTTTCGTCGGCCTTTGGTTCGGCTTGGCGGTGAGACCCTCACGATTGCACAAGGTAACGAGATATTGATTCTTG
GCCCTTTCCCTGGCGCACTGCCATCGAATCTACTAGTCCTCCTCAAAGCCAATGGGATAGAATTCCTTGCGAATTCGAGTTTTCCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAATCCCACCGTGATAAAAACGGCACCGTTGGACGCGTGGATCACTCTTTATCTGTGTGCGGCGGTGTGGCGTCGTACTGGGGCGCCGCGGCGGAGGGCCTCATGGG
GAGCCATTTTGACGAGGTCAAACGCATGGTCGCAGAGTTTCGTCGGCCTTTGGTTCGGCTTGGCGGTGAGACCCTCACGATTGCACAAGGTAACGAGATATTGATTCTTG
GCCCTTTCCCTGGCGCACTGCCATCGAATCTACTAGTCCTCCTCAAAGCCAATGGGATAGAATTCCTTGCGAATTCGAGTTTTCCGTGA
Protein sequenceShow/hide protein sequence
MESHRDKNGTVGRVDHSLSVCGGVASYWGAAAEGLMGSHFDEVKRMVAEFRRPLVRLGGETLTIAQGNEILILGPFPGALPSNLLVLLKANGIEFLANSSFP