CuGenDBv2

Gene ID	Moc04g34140
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Complex1_LYR domain-containing protein
Genome location	chr4:25762984..25763664
RNA-Seq Expression	Moc04g34140
Synteny	Moc04g34140
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_022134018.1 uncharacterized protein LOC111006395 [Momordica charantia]

7.6e-52

100

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Query:  MSSEALQVARVYRELLKAVKNHIGKEESKKHFVDYVAQKFRERSGLSEPHSLQQKIKLAHDYALLLNSVHHQKDLLFSYNIAIDRSEEMKRILGKSAASV
        MSSEALQVARVYRELLKAVKNHIGKEESKKHFVDYVAQKFRERSGLSEPHSLQQKIKLAHDYALLLNSVHHQKDLLFSYNIAIDRSEEMKRILGKSAASV
Subjt:  MSSEALQVARVYRELLKAVKNHIGKEESKKHFVDYVAQKFRERSGLSEPHSLQQKIKLAHDYALLLNSVHHQKDLLFSYNIAIDRSEEMKRILGKSAASV

Query:  GLRLPEAYQP
        GLRLPEAYQP
Subjt:  GLRLPEAYQP

XP_022933120.1 uncharacterized protein LOC111439884 [Cucurbita moschata]

1.2e-44

86.36

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Query:  MSSEALQVARVYRELLKAVKNHIGKEESKKHFVDYVAQKFRERSGLSEPHSLQQKIKLAHDYALLLNSVHHQKDLLFSYNIAIDRSEEMKRILGKSAASV
        M+SEALQVA+VYR+LLKAVK HIGKEE+KKHFVDYVAQKFRE+S LS+PHS+QQKIKLA DY  LLNSVHHQKDLLFSYNIAIDRS+EMKRILGKSAASV
Subjt:  MSSEALQVARVYRELLKAVKNHIGKEESKKHFVDYVAQKFRERSGLSEPHSLQQKIKLAHDYALLLNSVHHQKDLLFSYNIAIDRSEEMKRILGKSAASV

Query:  GLRLPEAYQP
        GL+LPE YQP
Subjt:  GLRLPEAYQP

XP_022967927.1 uncharacterized protein LOC111467294 [Cucurbita maxima]

2.4e-45

87.27

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Query:  MSSEALQVARVYRELLKAVKNHIGKEESKKHFVDYVAQKFRERSGLSEPHSLQQKIKLAHDYALLLNSVHHQKDLLFSYNIAIDRSEEMKRILGKSAASV
        M+SEALQVA+VYR+LLKAVKNHIGKEE+KKHFVDYVAQKFRE+S LS+PHS+QQKIKLA DY  LLNSVHHQKDLLFSYNIAIDRS+EMKRILGKSAASV
Subjt:  MSSEALQVARVYRELLKAVKNHIGKEESKKHFVDYVAQKFRERSGLSEPHSLQQKIKLAHDYALLLNSVHHQKDLLFSYNIAIDRSEEMKRILGKSAASV

Query:  GLRLPEAYQP
        GL+LPE YQP
Subjt:  GLRLPEAYQP

XP_023544932.1 uncharacterized protein LOC111804382 [Cucurbita pepo subsp. pepo]

7.6e-44

84.55

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Query:  MSSEALQVARVYRELLKAVKNHIGKEESKKHFVDYVAQKFRERSGLSEPHSLQQKIKLAHDYALLLNSVHHQKDLLFSYNIAIDRSEEMKRILGKSAASV
        M+SEA QVA+VYR+LLKAVKNHIGKEE+KKHFVDYVAQKFRE S +S+PHS+QQKIKLA DY  LLNSVHHQKDLLFSYNIA+DRS+EMKRILGKSAASV
Subjt:  MSSEALQVARVYRELLKAVKNHIGKEESKKHFVDYVAQKFRERSGLSEPHSLQQKIKLAHDYALLLNSVHHQKDLLFSYNIAIDRSEEMKRILGKSAASV

Query:  GLRLPEAYQP
        GL+LPE YQP
Subjt:  GLRLPEAYQP

XP_038889144.1 uncharacterized protein LOC120079034 [Benincasa hispida]

4.5e-44

85.45

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Query:  MSSEALQVARVYRELLKAVKNHIGKEESKKHFVDYVAQKFRERSGLSEPHSLQQKIKLAHDYALLLNSVHHQKDLLFSYNIAIDRSEEMKRILGKSAASV
        M+SEALQVA+VYR+LLKAVKNHIGKEESKKHFVDYVAQKFR+++ LS+PHS+QQ+IKLA DY  LLNSVHHQKDLLFSYNIA+DRSEEMKRILGKSAASV
Subjt:  MSSEALQVARVYRELLKAVKNHIGKEESKKHFVDYVAQKFRERSGLSEPHSLQQKIKLAHDYALLLNSVHHQKDLLFSYNIAIDRSEEMKRILGKSAASV

Query:  GLRLPEAYQP
        GL+LPE YQP
Subjt:  GLRLPEAYQP

TrEMBL top hits

e value

%identity

Alignment

A0A067DNY7 Uncharacterized protein

1.2e-39

76.36

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Query:  MSSEALQVARVYRELLKAVKNHIGKEESKKHFVDYVAQKFRERSGLSEPHSLQQKIKLAHDYALLLNSVHHQKDLLFSYNIAIDRSEEMKRILGKSAASV
        MSSE +Q A+VYR+LLKAVKNHIGKE+ K HF++YV Q+FR+ S LS+P S++QKIKLAHDY  LLNSVHH KDLLFSYNIA+DRS+EMKRILGKSAASV
Subjt:  MSSEALQVARVYRELLKAVKNHIGKEESKKHFVDYVAQKFRERSGLSEPHSLQQKIKLAHDYALLLNSVHHQKDLLFSYNIAIDRSEEMKRILGKSAASV

Query:  GLRLPEAYQP
        GL+LPE YQP
Subjt:  GLRLPEAYQP

A0A0A0L9E2 Uncharacterized protein

1.1e-43

82.73

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Query:  MSSEALQVARVYRELLKAVKNHIGKEESKKHFVDYVAQKFRERSGLSEPHSLQQKIKLAHDYALLLNSVHHQKDLLFSYNIAIDRSEEMKRILGKSAASV
        M+SEALQVA+VYR+LLKAVK H+GKEESKKHFVDYVAQKFR++S LS+PHS+QQ+IKLA DY  LLNSVHHQKDLLFSYNIA+DRS+EMKR+LGKSAASV
Subjt:  MSSEALQVARVYRELLKAVKNHIGKEESKKHFVDYVAQKFRERSGLSEPHSLQQKIKLAHDYALLLNSVHHQKDLLFSYNIAIDRSEEMKRILGKSAASV

Query:  GLRLPEAYQP
        GL LPE YQP
Subjt:  GLRLPEAYQP

A0A6J1C0V5 uncharacterized protein LOC111006395

3.7e-52

100

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Query:  MSSEALQVARVYRELLKAVKNHIGKEESKKHFVDYVAQKFRERSGLSEPHSLQQKIKLAHDYALLLNSVHHQKDLLFSYNIAIDRSEEMKRILGKSAASV
        MSSEALQVARVYRELLKAVKNHIGKEESKKHFVDYVAQKFRERSGLSEPHSLQQKIKLAHDYALLLNSVHHQKDLLFSYNIAIDRSEEMKRILGKSAASV
Subjt:  MSSEALQVARVYRELLKAVKNHIGKEESKKHFVDYVAQKFRERSGLSEPHSLQQKIKLAHDYALLLNSVHHQKDLLFSYNIAIDRSEEMKRILGKSAASV

Query:  GLRLPEAYQP
        GLRLPEAYQP
Subjt:  GLRLPEAYQP

A0A6J1EY92 uncharacterized protein LOC111439884

5.7e-45

86.36

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Query:  MSSEALQVARVYRELLKAVKNHIGKEESKKHFVDYVAQKFRERSGLSEPHSLQQKIKLAHDYALLLNSVHHQKDLLFSYNIAIDRSEEMKRILGKSAASV
        M+SEALQVA+VYR+LLKAVK HIGKEE+KKHFVDYVAQKFRE+S LS+PHS+QQKIKLA DY  LLNSVHHQKDLLFSYNIAIDRS+EMKRILGKSAASV
Subjt:  MSSEALQVARVYRELLKAVKNHIGKEESKKHFVDYVAQKFRERSGLSEPHSLQQKIKLAHDYALLLNSVHHQKDLLFSYNIAIDRSEEMKRILGKSAASV

Query:  GLRLPEAYQP
        GL+LPE YQP
Subjt:  GLRLPEAYQP

A0A6J1HS51 uncharacterized protein LOC111467294

1.1e-45

87.27

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Query:  MSSEALQVARVYRELLKAVKNHIGKEESKKHFVDYVAQKFRERSGLSEPHSLQQKIKLAHDYALLLNSVHHQKDLLFSYNIAIDRSEEMKRILGKSAASV
        M+SEALQVA+VYR+LLKAVKNHIGKEE+KKHFVDYVAQKFRE+S LS+PHS+QQKIKLA DY  LLNSVHHQKDLLFSYNIAIDRS+EMKRILGKSAASV
Subjt:  MSSEALQVARVYRELLKAVKNHIGKEESKKHFVDYVAQKFRERSGLSEPHSLQQKIKLAHDYALLLNSVHHQKDLLFSYNIAIDRSEEMKRILGKSAASV

Query:  GLRLPEAYQP
        GL+LPE YQP
Subjt:  GLRLPEAYQP

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G51960.1 CONTAINS InterPro DOMAIN/s: Complex 1 LYR protein (InterPro:IPR008011); Has 45 Blast hits to 45 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

9.3e-32

60.91

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Query:  MSSEALQVARVYRELLKAVKNHIGKEESKKHFVDYVAQKFRERSGLSEPHSLQQKIKLAHDYALLLNSVHHQKDLLFSYNIAIDRSEEMKRILGKSAASV
        MS E +  ARVYR+LLKAV  H+GKE+ K HF+D+V Q+FR+ +         +KI LA +Y  LLNS+H  KDLLFSYNIA+DR+EEMKR+L KSAASV
Subjt:  MSSEALQVARVYRELLKAVKNHIGKEESKKHFVDYVAQKFRERSGLSEPHSLQQKIKLAHDYALLLNSVHHQKDLLFSYNIAIDRSEEMKRILGKSAASV

Query:  GLRLPEAYQP
        GLRLPE Y+P
Subjt:  GLRLPEAYQP

Sequences

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CDS sequence

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ATGAGTTCAGAAGCCCTGCAGGTAGCTCGGGTCTACCGGGAGCTTCTCAAAGCTGTGAAGAACCATATTGGAAAGGAAGAGAGCAAGAAGCATTTTGTGGACTATGTGGC
CCAAAAGTTCAGGGAGAGAAGCGGGCTTTCCGAACCCCATTCTCTACAACAGAAAATTAAGCTTGCGCACGATTACGCATTGCTACTTAACAGTGTGCACCATCAAAAGG
ATTTGCTGTTCTCTTACAACATTGCTATTGATAGATCAGAGGAAATGAAGAGAATATTAGGCAAGTCTGCGGCAAGCGTGGGGCTTAGACTTCCTGAAGCTTATCAACCC
TGA

mRNA sequence

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Protein sequence

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MSSEALQVARVYRELLKAVKNHIGKEESKKHFVDYVAQKFRERSGLSEPHSLQQKIKLAHDYALLLNSVHHQKDLLFSYNIAIDRSEEMKRILGKSAASVGLRLPEAYQP

Moc04g34140 (gene) of Bitter gourd (OHB3-1) v2 genome