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Moc04g35510 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g35510
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionE3 ubiquitin-protein ligase ATL4-like
Genome locationchr4:26702821..26703240
RNA-Seq ExpressionMoc04g35510
SyntenyMoc04g35510
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0016740 - transferase activity (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8021557.1 hypothetical protein FH972_007437 [Carpinus fangiana]3.0e-3765.08Show/hide
Query:  MAVMVSVTLILVAILILVLIHVCIVVRALRRGFENEITSNNGDA---SMCRDDLEKLPCFEFMAMEERNGSPVDCAVCLGKFEMGDKCRMLPLCKHSFHA
        MA+++SVTL+   I++L+LIHVCIV RA RRGF N      G A   SM RDDL+KLPC+++ A EER+ SPVDCAVCL  F+MGDKCR+LP CKHSFHA
Subjt:  MAVMVSVTLILVAILILVLIHVCIVVRALRRGFENEITSNNGDA---SMCRDDLEKLPCFEFMAMEERNGSPVDCAVCLGKFEMGDKCRMLPLCKHSFHA

Query:  RCVDEWLLVTPICPICRTNTLESLKG
        +CVD WLL TPICPICRT+  ES KG
Subjt:  RCVDEWLLVTPICPICRTNTLESLKG

KAG6578641.1 putative RING-H2 finger protein ATL50, partial [Cucurbita argyrosperma subsp. sororia]1.1e-4271.76Show/hide
Query:  MAVMVSVTLILVAILILVLIHVCIVVRALRRGFENEIT------SNNGDASMC--RDDLEKLPCFEFMAMEERNGSPVDCAVCLGKFEMGDKCRMLPLCK
        M ++VS+ LIL+ I ILVLI+V IV RALR GFENE T      +NNG+A+ C  RDDLEKLPCF++MAMEE  GSPVDCAVCLGKF+MG+KCR+LP+CK
Subjt:  MAVMVSVTLILVAILILVLIHVCIVVRALRRGFENEIT------SNNGDASMC--RDDLEKLPCFEFMAMEERNGSPVDCAVCLGKFEMGDKCRMLPLCK

Query:  HSFHARCVDEWLLVTPICPICRTNTLESLKG
        HSFHA+CVDEWLL+TP CPICRT+TLESLKG
Subjt:  HSFHARCVDEWLLVTPICPICRTNTLESLKG

XP_022134384.1 E3 ubiquitin-protein ligase ATL4-like [Momordica charantia]4.9e-72100Show/hide
Query:  MAVMVSVTLILVAILILVLIHVCIVVRALRRGFENEITSNNGDASMCRDDLEKLPCFEFMAMEERNGSPVDCAVCLGKFEMGDKCRMLPLCKHSFHARCV
        MAVMVSVTLILVAILILVLIHVCIVVRALRRGFENEITSNNGDASMCRDDLEKLPCFEFMAMEERNGSPVDCAVCLGKFEMGDKCRMLPLCKHSFHARCV
Subjt:  MAVMVSVTLILVAILILVLIHVCIVVRALRRGFENEITSNNGDASMCRDDLEKLPCFEFMAMEERNGSPVDCAVCLGKFEMGDKCRMLPLCKHSFHARCV

Query:  DEWLLVTPICPICRTNTLESLKGCGGREGNVVLVTPTSS
        DEWLLVTPICPICRTNTLESLKGCGGREGNVVLVTPTSS
Subjt:  DEWLLVTPICPICRTNTLESLKGCGGREGNVVLVTPTSS

XP_023551528.1 RING-H2 finger protein ATL74-like [Cucurbita pepo subsp. pepo]4.8e-4369.85Show/hide
Query:  MAVMVSVTLILVAILILVLIHVCIVVRALRRGFENEIT------SNNGDASMC--RDDLEKLPCFEFMAMEERNGSPVDCAVCLGKFEMGDKCRMLPLCK
        M ++VS+ LIL+ I ILVLI+V IV RALR GFENE T      +NNG+A+ C  RDDLEKLPCF++MAMEE  GSPVDCAVCLGKF+MG+KCR+LP+CK
Subjt:  MAVMVSVTLILVAILILVLIHVCIVVRALRRGFENEIT------SNNGDASMC--RDDLEKLPCFEFMAMEERNGSPVDCAVCLGKFEMGDKCRMLPLCK

Query:  HSFHARCVDEWLLVTPICPICRTNTLESLKGCGGRE
        HSFHA+CVDEWLL+TP CPICRT+TL SLKG  G E
Subjt:  HSFHARCVDEWLLVTPICPICRTNTLESLKGCGGRE

XP_030956167.1 E3 ubiquitin-protein ligase ATL4-like [Quercus lobata]4.8e-3566.1Show/hide
Query:  MAVMVSVTLILVAILILVLIHVCIVVRALRRGFEN---EITSNNGDASMCRDDLEKLPCFEFMAMEERNGSPVDCAVCLGKFEMGDKCRMLPLCKHSFHA
        MA+++SVTL+   IL+LVLIHVCIV R+ RRGF N   +   + G  SM RDDLEKLPCF+++A +ER+ SPVDCAVCL  F+MGDKCR+LP+CKHSFHA
Subjt:  MAVMVSVTLILVAILILVLIHVCIVVRALRRGFEN---EITSNNGDASMCRDDLEKLPCFEFMAMEERNGSPVDCAVCLGKFEMGDKCRMLPLCKHSFHA

Query:  RCVDEWLLVTPICPICRT
        +CVD WLL TPICP+CRT
Subjt:  RCVDEWLLVTPICPICRT

TrEMBL top hitse value%identityAlignment
A0A5B6YID6 Putative RING-H2 finger protein ATL56-like6.1e-3665.04Show/hide
Query:  MAVMVSVTLILVAILILVLIHVCIVVRALRRGFENEITSNNGDASMCRDDLEKLPCFEFMAMEERNGSPVDCAVCLGKFEMGDKCRMLPLCKHSFHARCV
        MA+++SV L+ V I +LVLIHVC+V RA RRGF N      G  SM RDDLEKLPCF+F A  E+  SPVDCAVCL  F++GDKCR+LPLCKHSFHA+CV
Subjt:  MAVMVSVTLILVAILILVLIHVCIVVRALRRGFENEITSNNGDASMCRDDLEKLPCFEFMAMEERNGSPVDCAVCLGKFEMGDKCRMLPLCKHSFHARCV

Query:  DEWLLVTPICPICRTNTLESLKG
        D WLL TPICPICRT+  ++ KG
Subjt:  DEWLLVTPICPICRTNTLESLKG

A0A5J5AGW7 Uncharacterized protein1.5e-3460.61Show/hide
Query:  MAVMVSVTLILVAILILVLIHVCIVVRALRRGFENEITSNN---GDASMCRDDLEKLPCFEFMAMEERNGSPVDCAVCLGKFEMGDKCRMLPLCKHSFHA
        MA+++S+ L+ VAI +LVLIHVCIV RA  RGF++ I       G  SM +DDLEKLPCF+F A  E+  SPVDCAVCL  F++GDKCR+LPLCKHSFHA
Subjt:  MAVMVSVTLILVAILILVLIHVCIVVRALRRGFENEITSNN---GDASMCRDDLEKLPCFEFMAMEERNGSPVDCAVCLGKFEMGDKCRMLPLCKHSFHA

Query:  RCVDEWLLVTPICPICRTNTLESLKGCGGREG
        +CVD WLL TPICPICRT+  ++ KG     G
Subjt:  RCVDEWLLVTPICPICRTNTLESLKGCGGREG

A0A5N6QVF9 RING-type domain-containing protein1.5e-3765.08Show/hide
Query:  MAVMVSVTLILVAILILVLIHVCIVVRALRRGFENEITSNNGDA---SMCRDDLEKLPCFEFMAMEERNGSPVDCAVCLGKFEMGDKCRMLPLCKHSFHA
        MA+++SVTL+   I++L+LIHVCIV RA RRGF N      G A   SM RDDL+KLPC+++ A EER+ SPVDCAVCL  F+MGDKCR+LP CKHSFHA
Subjt:  MAVMVSVTLILVAILILVLIHVCIVVRALRRGFENEITSNNGDA---SMCRDDLEKLPCFEFMAMEERNGSPVDCAVCLGKFEMGDKCRMLPLCKHSFHA

Query:  RCVDEWLLVTPICPICRTNTLESLKG
        +CVD WLL TPICPICRT+  ES KG
Subjt:  RCVDEWLLVTPICPICRTNTLESLKG

A0A6J1BYM3 E3 ubiquitin-protein ligase ATL4-like2.4e-72100Show/hide
Query:  MAVMVSVTLILVAILILVLIHVCIVVRALRRGFENEITSNNGDASMCRDDLEKLPCFEFMAMEERNGSPVDCAVCLGKFEMGDKCRMLPLCKHSFHARCV
        MAVMVSVTLILVAILILVLIHVCIVVRALRRGFENEITSNNGDASMCRDDLEKLPCFEFMAMEERNGSPVDCAVCLGKFEMGDKCRMLPLCKHSFHARCV
Subjt:  MAVMVSVTLILVAILILVLIHVCIVVRALRRGFENEITSNNGDASMCRDDLEKLPCFEFMAMEERNGSPVDCAVCLGKFEMGDKCRMLPLCKHSFHARCV

Query:  DEWLLVTPICPICRTNTLESLKGCGGREGNVVLVTPTSS
        DEWLLVTPICPICRTNTLESLKGCGGREGNVVLVTPTSS
Subjt:  DEWLLVTPICPICRTNTLESLKGCGGREGNVVLVTPTSS

A0A7N2L0A1 RING-type domain-containing protein2.3e-3566.1Show/hide
Query:  MAVMVSVTLILVAILILVLIHVCIVVRALRRGFEN---EITSNNGDASMCRDDLEKLPCFEFMAMEERNGSPVDCAVCLGKFEMGDKCRMLPLCKHSFHA
        MA+++SVTL+   IL+LVLIHVCIV R+ RRGF N   +   + G  SM RDDLEKLPCF+++A +ER+ SPVDCAVCL  F+MGDKCR+LP+CKHSFHA
Subjt:  MAVMVSVTLILVAILILVLIHVCIVVRALRRGFEN---EITSNNGDASMCRDDLEKLPCFEFMAMEERNGSPVDCAVCLGKFEMGDKCRMLPLCKHSFHA

Query:  RCVDEWLLVTPICPICRT
        +CVD WLL TPICP+CRT
Subjt:  RCVDEWLLVTPICPICRT

SwissProt top hitse value%identityAlignment
Q5EAE9 RING-H2 finger protein ATL432.0e-1239.74Show/hide
Query:  ITSNNGDASMCRDDLEKLPCFEFMAMEERNGSPVDCAVCLGKFEMGDKCRMLPLCKHSFHARCVDEWLLVTPICPICR
        +     ++ + R  +E LP F F A+       ++CAVCL +FE  +  R+LP CKH+FH  CVD WL     CP+CR
Subjt:  ITSNNGDASMCRDDLEKLPCFEFMAMEERNGSPVDCAVCLGKFEMGDKCRMLPLCKHSFHARCVDEWLLVTPICPICR

Q7X843 RING-H2 finger protein ATL485.4e-1341.67Show/hide
Query:  DASMCRDDLEKLPCFEFMAMEERNGSPVDCAVCLGKFEMGDKCRMLPLCKHSFHARCVDEWLLVTPICPICR
        D+ + +  ++ LP F +  +      P DCAVCL +F   DK R+LP+C H+FH  C+D WLL    CP+CR
Subjt:  DASMCRDDLEKLPCFEFMAMEERNGSPVDCAVCLGKFEMGDKCRMLPLCKHSFHARCVDEWLLVTPICPICR

Q940Q4 RING-H2 finger protein ATL131.8e-1329.03Show/hide
Query:  VSVTLILVAILILVLIHVC----IVVRAL-------RRGFENEITSNNG---------DASMCRDDLEKLPCFEFMAMEERNGSPVDCAVCLGKFEMGDK
        +S +++L+ I++ ++  +     ++VR L       R  + + +T+  G         D+ + +  ++ LP F + ++      P DCAVCL +FE  DK
Subjt:  VSVTLILVAILILVLIHVC----IVVRAL-------RRGFENEITSNNG---------DASMCRDDLEKLPCFEFMAMEERNGSPVDCAVCLGKFEMGDK

Query:  CRMLPLCKHSFHARCVDEWLLVTPICPICRTNTLESLKGCGGREGNVVLVTPTSS
         R+LP C H+FH  C+D WLL    CP+CR++ L  L        + +LV  ++S
Subjt:  CRMLPLCKHSFHARCVDEWLLVTPICPICRTNTLESLKGCGGREGNVVLVTPTSS

Q9LY41 E3 ubiquitin-protein ligase ATL41.1e-1333.08Show/hide
Query:  VSVTLILVAILILVLIHVCIVVRALRRGFENEI---TSNNGDASMCRDD-----------------LEKLPCFEFMAMEERNGS--PVDCAVCLGKFEMG
        V V ++++ + +L+ + +C ++R L R     +   +S++  A++  D                  L+ LP F+F ++  R+ S    DCAVCL KFE  
Subjt:  VSVTLILVAILILVLIHVCIVVRALRRGFENEI---TSNNGDASMCRDD-----------------LEKLPCFEFMAMEERNGS--PVDCAVCLGKFEMG

Query:  DKCRMLPLCKHSFHARCVDEWLLVTPICPICRT
        D+ R+LPLC H+FHA C+D WL+    CP+CR+
Subjt:  DKCRMLPLCKHSFHARCVDEWLLVTPICPICRT

Q9ZV53 Putative RING-H2 finger protein ATL494.1e-1329.08Show/hide
Query:  VMVSVTLILVAILILVLIHVCIVVRALRRGFENEITSNNG---------DASMCRDDLEKLPCFEFMAMEERNGSPVDCAVCLGKFEMGDKCRMLPLCKH
        +++S+   +  +L +++  +    R  R  + + +T+  G         D+ + +  ++ LP F + ++     SP DC VCL +FE  DK R+LP C H
Subjt:  VMVSVTLILVAILILVLIHVCIVVRALRRGFENEITSNNG---------DASMCRDDLEKLPCFEFMAMEERNGSPVDCAVCLGKFEMGDKCRMLPLCKH

Query:  SFHARCVDEWLLVTPICPICRTNTLESLKGCGGREGNVVLV
        +FH  C+D WLL    CP+CR+N L           + +LV
Subjt:  SFHARCVDEWLLVTPICPICRTNTLESLKGCGGREGNVVLV

Arabidopsis top hitse value%identityAlignment
AT2G18650.1 RING/U-box superfamily protein2.9e-1429.08Show/hide
Query:  VMVSVTLILVAILILVLIHVCIVVRALRRGFENEITSNNG---------DASMCRDDLEKLPCFEFMAMEERNGSPVDCAVCLGKFEMGDKCRMLPLCKH
        +++S+   +  +L +++  +    R  R  + + +T+  G         D+ + +  ++ LP F + ++     SP DC VCL +FE  DK R+LP C H
Subjt:  VMVSVTLILVAILILVLIHVCIVVRALRRGFENEITSNNG---------DASMCRDDLEKLPCFEFMAMEERNGSPVDCAVCLGKFEMGDKCRMLPLCKH

Query:  SFHARCVDEWLLVTPICPICRTNTLESLKGCGGREGNVVLV
        +FH  C+D WLL    CP+CR+N L           + +LV
Subjt:  SFHARCVDEWLLVTPICPICRTNTLESLKGCGGREGNVVLV

AT3G48030.1 hypoxia-responsive family protein / zinc finger (C3HC4-type RING finger) family protein3.8e-1441.67Show/hide
Query:  DASMCRDDLEKLPCFEFMAMEERNGSPVDCAVCLGKFEMGDKCRMLPLCKHSFHARCVDEWLLVTPICPICR
        D+ + +  ++ LP F +  +      P DCAVCL +F   DK R+LP+C H+FH  C+D WLL    CP+CR
Subjt:  DASMCRDDLEKLPCFEFMAMEERNGSPVDCAVCLGKFEMGDKCRMLPLCKHSFHARCVDEWLLVTPICPICR

AT3G60220.1 TOXICOS EN LEVADURA 47.7e-1533.08Show/hide
Query:  VSVTLILVAILILVLIHVCIVVRALRRGFENEI---TSNNGDASMCRDD-----------------LEKLPCFEFMAMEERNGS--PVDCAVCLGKFEMG
        V V ++++ + +L+ + +C ++R L R     +   +S++  A++  D                  L+ LP F+F ++  R+ S    DCAVCL KFE  
Subjt:  VSVTLILVAILILVLIHVCIVVRALRRGFENEI---TSNNGDASMCRDD-----------------LEKLPCFEFMAMEERNGS--PVDCAVCLGKFEMG

Query:  DKCRMLPLCKHSFHARCVDEWLLVTPICPICRT
        D+ R+LPLC H+FHA C+D WL+    CP+CR+
Subjt:  DKCRMLPLCKHSFHARCVDEWLLVTPICPICRT

AT4G30400.1 RING/U-box superfamily protein1.3e-1429.03Show/hide
Query:  VSVTLILVAILILVLIHVC----IVVRAL-------RRGFENEITSNNG---------DASMCRDDLEKLPCFEFMAMEERNGSPVDCAVCLGKFEMGDK
        +S +++L+ I++ ++  +     ++VR L       R  + + +T+  G         D+ + +  ++ LP F + ++      P DCAVCL +FE  DK
Subjt:  VSVTLILVAILILVLIHVC----IVVRAL-------RRGFENEITSNNG---------DASMCRDDLEKLPCFEFMAMEERNGSPVDCAVCLGKFEMGDK

Query:  CRMLPLCKHSFHARCVDEWLLVTPICPICRTNTLESLKGCGGREGNVVLVTPTSS
         R+LP C H+FH  C+D WLL    CP+CR++ L  L        + +LV  ++S
Subjt:  CRMLPLCKHSFHARCVDEWLLVTPICPICRTNTLESLKGCGGREGNVVLVTPTSS

AT5G05810.1 RING/U-box superfamily protein1.4e-1339.74Show/hide
Query:  ITSNNGDASMCRDDLEKLPCFEFMAMEERNGSPVDCAVCLGKFEMGDKCRMLPLCKHSFHARCVDEWLLVTPICPICR
        +     ++ + R  +E LP F F A+       ++CAVCL +FE  +  R+LP CKH+FH  CVD WL     CP+CR
Subjt:  ITSNNGDASMCRDDLEKLPCFEFMAMEERNGSPVDCAVCLGKFEMGDKCRMLPLCKHSFHARCVDEWLLVTPICPICR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGTGATGGTATCTGTAACATTGATACTTGTGGCCATTTTAATTTTGGTGTTGATTCACGTTTGCATAGTTGTAAGAGCATTGAGAAGAGGGTTTGAAAATGAGAT
TACATCCAACAATGGAGATGCAAGTATGTGTAGAGATGACTTGGAGAAGCTTCCTTGCTTTGAATTCATGGCTATGGAGGAAAGAAATGGCAGCCCTGTGGATTGTGCGG
TTTGCTTGGGGAAGTTTGAGATGGGGGACAAGTGTAGAATGTTGCCTCTTTGCAAGCATAGCTTCCATGCTCGTTGTGTGGATGAGTGGCTTTTGGTCACTCCTATTTGC
CCTATTTGTCGGACCAATACTCTTGAGTCGCTCAAGGGTTGCGGTGGCCGAGAAGGCAATGTCGTCTTAGTGACTCCAACTTCAAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGTGATGGTATCTGTAACATTGATACTTGTGGCCATTTTAATTTTGGTGTTGATTCACGTTTGCATAGTTGTAAGAGCATTGAGAAGAGGGTTTGAAAATGAGAT
TACATCCAACAATGGAGATGCAAGTATGTGTAGAGATGACTTGGAGAAGCTTCCTTGCTTTGAATTCATGGCTATGGAGGAAAGAAATGGCAGCCCTGTGGATTGTGCGG
TTTGCTTGGGGAAGTTTGAGATGGGGGACAAGTGTAGAATGTTGCCTCTTTGCAAGCATAGCTTCCATGCTCGTTGTGTGGATGAGTGGCTTTTGGTCACTCCTATTTGC
CCTATTTGTCGGACCAATACTCTTGAGTCGCTCAAGGGTTGCGGTGGCCGAGAAGGCAATGTCGTCTTAGTGACTCCAACTTCAAGTTGA
Protein sequenceShow/hide protein sequence
MAVMVSVTLILVAILILVLIHVCIVVRALRRGFENEITSNNGDASMCRDDLEKLPCFEFMAMEERNGSPVDCAVCLGKFEMGDKCRMLPLCKHSFHARCVDEWLLVTPIC
PICRTNTLESLKGCGGREGNVVLVTPTSS