; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc04g35590 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g35590
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRNA ligase/cyclic nucleotide phosphodiesterase
Genome locationchr4:26755501..26756908
RNA-Seq ExpressionMoc04g35590
SyntenyMoc04g35590
Gene Ontology termsGO:0016874 - ligase activity (molecular function)
InterPro domainsIPR009097 - Cyclic phosphodiesterase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004142350.1 uncharacterized protein LOC101208638 [Cucumis sativus]1.4e-8993.92Show/hide
Query:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSCPFVEPAKVESIVKNFASKQDPLPLSLSSIGSLPNDNNILFLGPAPTISLLQ
        MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFS PF+EP KVESIVKNFASKQ+PL LSLSSIGSLP+DNNILFLGPAP+ISLLQ
Subjt:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSCPFVEPAKVESIVKNFASKQDPLPLSLSSIGSLPNDNNILFLGPAPTISLLQ

Query:  FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQDVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLEEAV
        FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQ+VPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVL   V
Subjt:  FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQDVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLEEAV

XP_022134555.1 uncharacterized protein LOC111006773 [Momordica charantia]2.4e-9498.34Show/hide
Query:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSCPFVEPAKVESIVKNFASKQDPLPLSLSSIGSLPNDNNILFLGPAPTISLLQ
        MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSCPFVEPAKVESIVKNFASKQDPLPLSLSSIGSLPNDNNILFLGPAPTISLLQ
Subjt:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSCPFVEPAKVESIVKNFASKQDPLPLSLSSIGSLPNDNNILFLGPAPTISLLQ

Query:  FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQDVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLEEAV
        FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQDVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVL   V
Subjt:  FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQDVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLEEAV

XP_022964210.1 uncharacterized protein LOC111464296 [Cucurbita moschata]6.1e-9095.48Show/hide
Query:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSCPFVEPAKVESIVKNFASKQDPLPLSLSSIGSLPNDNNILFLGPAPTISLLQ
        MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFS PF+EP KVESIVKNFASKQ+PLPLSL+SIGSLPNDNNILFLGPAP+ISLLQ
Subjt:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSCPFVEPAKVESIVKNFASKQDPLPLSLSSIGSLPNDNNILFLGPAPTISLLQ

Query:  FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQDVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVL
        FQSQLCEAMRKEGIE GEEYRLGSWIPHCAVAQ+VPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVL
Subjt:  FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQDVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVL

XP_022989855.1 uncharacterized protein LOC111486920 [Cucurbita maxima]1.4e-8994.92Show/hide
Query:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSCPFVEPAKVESIVKNFASKQDPLPLSLSSIGSLPNDNNILFLGPAPTISLLQ
        MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFS PF+EP KVESIVKNFASKQ+PLPLSL+SIGSLPNDNNILFLGPAP+ISLLQ
Subjt:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSCPFVEPAKVESIVKNFASKQDPLPLSLSSIGSLPNDNNILFLGPAPTISLLQ

Query:  FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQDVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVL
        FQSQLCEAMRKEGIE GEEYRLGSWIPHC+VAQ+VPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVL
Subjt:  FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQDVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVL

XP_038890563.1 uncharacterized protein LOC120080080 [Benincasa hispida]1.4e-8993.37Show/hide
Query:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSCPFVEPAKVESIVKNFASKQDPLPLSLSSIGSLPNDNNILFLGPAPTISLLQ
        MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFS PF+EP KVESIVKNFASKQ+PLPLSLSSIGSLP+D+NILFLGPAP+ISLLQ
Subjt:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSCPFVEPAKVESIVKNFASKQDPLPLSLSSIGSLPNDNNILFLGPAPTISLLQ

Query:  FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQDVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLEEAV
        FQSQLC+AMRKEGIEIGEEYRLGSWIPHCAVAQ+VPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVL   V
Subjt:  FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQDVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLEEAV

TrEMBL top hitse value%identityAlignment
A0A0A0KVB2 Uncharacterized protein6.6e-9093.92Show/hide
Query:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSCPFVEPAKVESIVKNFASKQDPLPLSLSSIGSLPNDNNILFLGPAPTISLLQ
        MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFS PF+EP KVESIVKNFASKQ+PL LSLSSIGSLP+DNNILFLGPAP+ISLLQ
Subjt:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSCPFVEPAKVESIVKNFASKQDPLPLSLSSIGSLPNDNNILFLGPAPTISLLQ

Query:  FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQDVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLEEAV
        FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQ+VPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVL   V
Subjt:  FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQDVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLEEAV

A0A5A7T7Y4 RNA ligase/cyclic nucleotide phosphodiesterase6.6e-9093.92Show/hide
Query:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSCPFVEPAKVESIVKNFASKQDPLPLSLSSIGSLPNDNNILFLGPAPTISLLQ
        MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFS PF+EP KVESIVKNFASKQ+PL LSLSSIGSLP+DNNILFLGPAP+ISLLQ
Subjt:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSCPFVEPAKVESIVKNFASKQDPLPLSLSSIGSLPNDNNILFLGPAPTISLLQ

Query:  FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQDVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLEEAV
        FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQ+VPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVL   V
Subjt:  FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQDVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLEEAV

A0A6J1BYL1 uncharacterized protein LOC1110067731.2e-9498.34Show/hide
Query:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSCPFVEPAKVESIVKNFASKQDPLPLSLSSIGSLPNDNNILFLGPAPTISLLQ
        MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSCPFVEPAKVESIVKNFASKQDPLPLSLSSIGSLPNDNNILFLGPAPTISLLQ
Subjt:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSCPFVEPAKVESIVKNFASKQDPLPLSLSSIGSLPNDNNILFLGPAPTISLLQ

Query:  FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQDVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLEEAV
        FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQDVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVL   V
Subjt:  FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQDVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLEEAV

A0A6J1HK74 uncharacterized protein LOC1114642963.0e-9095.48Show/hide
Query:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSCPFVEPAKVESIVKNFASKQDPLPLSLSSIGSLPNDNNILFLGPAPTISLLQ
        MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFS PF+EP KVESIVKNFASKQ+PLPLSL+SIGSLPNDNNILFLGPAP+ISLLQ
Subjt:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSCPFVEPAKVESIVKNFASKQDPLPLSLSSIGSLPNDNNILFLGPAPTISLLQ

Query:  FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQDVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVL
        FQSQLCEAMRKEGIE GEEYRLGSWIPHCAVAQ+VPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVL
Subjt:  FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQDVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVL

A0A6J1JNI6 uncharacterized protein LOC1114869206.6e-9094.92Show/hide
Query:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSCPFVEPAKVESIVKNFASKQDPLPLSLSSIGSLPNDNNILFLGPAPTISLLQ
        MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFS PF+EP KVESIVKNFASKQ+PLPLSL+SIGSLPNDNNILFLGPAP+ISLLQ
Subjt:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSCPFVEPAKVESIVKNFASKQDPLPLSLSSIGSLPNDNNILFLGPAPTISLLQ

Query:  FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQDVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVL
        FQSQLCEAMRKEGIE GEEYRLGSWIPHC+VAQ+VPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVL
Subjt:  FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQDVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G28140.1 RNA ligase/cyclic nucleotide phosphodiesterase family protein4.6e-6769.66Show/hide
Query:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFS-CPFVEPAKVESIVKNFASKQDPLPLSLSSIGSLPNDNNILFLGPAPTISLL
        MSQG+AIELYFDPALENQVLKAWNV ARRQIST LI  ESRPHITLFS    ++  K+E I+K+F+SKQ+P+ LS SSIGS  +D+N LFL P P++SL+
Subjt:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFS-CPFVEPAKVESIVKNFASKQDPLPLSLSSIGSLPNDNNILFLGPAPTISLL

Query:  QFQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQDVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVL
        Q Q QLCE ++KEG EIGEEYR+ SW+P C+VA DVPK+R++E F VLRDLKL V GYA+DIGLVEFSPVRE+FSF L
Subjt:  QFQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQDVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVL

AT3G28140.2 RNA ligase/cyclic nucleotide phosphodiesterase family protein6.4e-5364.71Show/hide
Query:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFS-CPFVEPAKVESIVKNFASKQDPLPLSLSSIGSLPNDNNILFLGPAPTISLL
        MSQG+AIELYFDPALENQVLKAWNV ARRQIST LI  ESRPHITLFS    ++  K+E I+K+F+SKQ+P+ LS SSIGS  +D+N LFL P P++SL+
Subjt:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFS-CPFVEPAKVESIVKNFASKQDPLPLSLSSIGSLPNDNNILFLGPAPTISLL

Query:  QFQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQDVPKARMAEAFCVLRDLKL
        Q Q QLCE ++KEG EIGEEYR+ SW+P C+VA DVPK+R++E F V     L
Subjt:  QFQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQDVPKARMAEAFCVLRDLKL

AT5G40190.1 RNA ligase/cyclic nucleotide phosphodiesterase family protein2.3e-7169.49Show/hide
Query:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSCPFVEPAKVESIVKNFASKQDPLPLSLSSIGSLPNDNNILFLGPAPTISLLQ
        MS+G+AIELYFDPALENQVLKAWNV ARRQIST+LI  ESRPHITLFS  F +  ++ES++KNF SKQ+P+ +S S+IGS  +DNN+LFL P P++SLLQ
Subjt:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSCPFVEPAKVESIVKNFASKQDPLPLSLSSIGSLPNDNNILFLGPAPTISLLQ

Query:  FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQDVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVL
         Q+QLC+ ++KE ++IGEEYR+ SW+P C VA DVPK+RMAEAF VLRDLKLPV+GY ++IGLVEFSPVRE+FSF L
Subjt:  FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQDVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCACAAGGGTTTGCGATCGAGCTCTATTTCGATCCGGCACTTGAAAATCAGGTTCTCAAGGCTTGGAATGTACTAGCCCGCCGTCAAATTAGTACGCAGCTC
ATCGAGATTGAATCACGCCCTCACATTACCCTCTTCTCCTGCCCCTTCGTCGAACCCGCGAAAGTCGAATCCATCGTTAAAAATTTCGCTTCTAAACAGGACCCC
TTGCCTTTGTCCTTATCGTCAATAGGCAGCCTTCCCAATGACAACAACATCCTCTTTCTGGGTCCTGCGCCTACAATTTCACTCCTCCAATTCCAGTCTCAATTG
TGCGAAGCAATGAGGAAAGAAGGAATCGAAATCGGGGAGGAATATCGCCTGGGCTCTTGGATTCCCCATTGCGCTGTTGCTCAGGATGTGCCCAAGGCTCGAATG
GCAGAGGCATTTTGTGTTCTAAGGGATTTGAAGTTGCCAGTTTCCGGGTACGCAATTGATATCGGGTTGGTGGAATTTTCTCCTGTTCGGGAGCTGTTCTCTTTT
GTTCTTGAAGAGGCGGTAACTATCATAAAGAATCCGATCCCGAGCTACCCTCATGTGCTGTACGTCCTTGAGGTTGGGACTGGTGGTGTTGTAGATCCCTCTATT
GCTCTGTTTCCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCACAAGGGTTTGCGATCGAGCTCTATTTCGATCCGGCACTTGAAAATCAGGTTCTCAAGGCTTGGAATGTACTAGCCCGCCGTCAAATTAGTACGCAGCTC
ATCGAGATTGAATCACGCCCTCACATTACCCTCTTCTCCTGCCCCTTCGTCGAACCCGCGAAAGTCGAATCCATCGTTAAAAATTTCGCTTCTAAACAGGACCCC
TTGCCTTTGTCCTTATCGTCAATAGGCAGCCTTCCCAATGACAACAACATCCTCTTTCTGGGTCCTGCGCCTACAATTTCACTCCTCCAATTCCAGTCTCAATTG
TGCGAAGCAATGAGGAAAGAAGGAATCGAAATCGGGGAGGAATATCGCCTGGGCTCTTGGATTCCCCATTGCGCTGTTGCTCAGGATGTGCCCAAGGCTCGAATG
GCAGAGGCATTTTGTGTTCTAAGGGATTTGAAGTTGCCAGTTTCCGGGTACGCAATTGATATCGGGTTGGTGGAATTTTCTCCTGTTCGGGAGCTGTTCTCTTTT
GTTCTTGAAGAGGCGGTAACTATCATAAAGAATCCGATCCCGAGCTACCCTCATGTGCTGTACGTCCTTGAGGTTGGGACTGGTGGTGTTGTAGATCCCTCTATT
GCTCTGTTTCCTTAA
Protein sequenceShow/hide protein sequence
MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSCPFVEPAKVESIVKNFASKQDPLPLSLSSIGSLPNDNNILFLGPAPTISLLQFQSQL
CEAMRKEGIEIGEEYRLGSWIPHCAVAQDVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLEEAVTIIKNPIPSYPHVLYVLEVGTGGVVDPSI
ALFP