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Moc04g36250 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g36250
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionTranscription factor protein
Genome locationchr4:27195102..27195982
RNA-Seq ExpressionMoc04g36250
SyntenyMoc04g36250
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0040008 - regulation of growth (biological process)
GO:0005634 - nucleus (cellular component)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR011598 - Myc-type, basic helix-loop-helix (bHLH) domain
IPR036638 - Helix-loop-helix DNA-binding domain superfamily
IPR044293 - Transcription factor PRE


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7033162.1 Transcription factor PRE5 [Cucurbita argyrosperma subsp. argyrosperma]6.3e-3694.51Show/hide
Query:  MSSRRSRQSGGSRISDDQIIELVSKLRQLVPEIRHRRSDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDADSAEAAIIRSLIMQ
        MS+RRSRQ G SRISDDQIIEL+SKLR LVPEIRHRRSDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDADSAEAAIIRSLIMQ
Subjt:  MSSRRSRQSGGSRISDDQIIELVSKLRQLVPEIRHRRSDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDADSAEAAIIRSLIMQ

XP_004151201.2 transcription factor PRE6 [Cucumis sativus]6.3e-3695.6Show/hide
Query:  MSSRRSRQSGGSRISDDQIIELVSKLRQLVPEIRHRRSDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDADSAEAAIIRSLIMQ
        MSSRRSRQS  SRISDDQIIELVSKLRQLVPEIRHRR DKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTID+DSAEAAIIRSLIMQ
Subjt:  MSSRRSRQSGGSRISDDQIIELVSKLRQLVPEIRHRRSDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDADSAEAAIIRSLIMQ

XP_022134204.1 transcription factor PRE6 [Momordica charantia]3.0e-38100Show/hide
Query:  MSSRRSRQSGGSRISDDQIIELVSKLRQLVPEIRHRRSDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDADSAEAAIIRSLIMQ
        MSSRRSRQSGGSRISDDQIIELVSKLRQLVPEIRHRRSDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDADSAEAAIIRSLIMQ
Subjt:  MSSRRSRQSGGSRISDDQIIELVSKLRQLVPEIRHRRSDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDADSAEAAIIRSLIMQ

XP_023548992.1 transcription factor PRE6-like [Cucurbita pepo subsp. pepo]6.3e-3694.51Show/hide
Query:  MSSRRSRQSGGSRISDDQIIELVSKLRQLVPEIRHRRSDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDADSAEAAIIRSLIMQ
        MS+RRSRQ G SRISDDQIIEL+SKLR LVPEIRHRRSDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDADSAEAAIIRSLIMQ
Subjt:  MSSRRSRQSGGSRISDDQIIELVSKLRQLVPEIRHRRSDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDADSAEAAIIRSLIMQ

XP_038890645.1 LOW QUALITY PROTEIN: transcription factor PRE6 [Benincasa hispida]6.3e-3695.6Show/hide
Query:  MSSRRSRQSGGSRISDDQIIELVSKLRQLVPEIRHRRSDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDADSAEAAIIRSLIMQ
        MSSRRSRQS  SRI+DDQIIELVSKLRQLVPEIRHRR DKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDADSAEAAIIRSLIMQ
Subjt:  MSSRRSRQSGGSRISDDQIIELVSKLRQLVPEIRHRRSDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDADSAEAAIIRSLIMQ

TrEMBL top hitse value%identityAlignment
A0A0A0KXB9 Transcription regulator3.1e-3695.6Show/hide
Query:  MSSRRSRQSGGSRISDDQIIELVSKLRQLVPEIRHRRSDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDADSAEAAIIRSLIMQ
        MSSRRSRQS  SRISDDQIIELVSKLRQLVPEIRHRR DKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTID+DSAEAAIIRSLIMQ
Subjt:  MSSRRSRQSGGSRISDDQIIELVSKLRQLVPEIRHRRSDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDADSAEAAIIRSLIMQ

A0A1S3CB29 transcription factor PRE63.1e-3695.6Show/hide
Query:  MSSRRSRQSGGSRISDDQIIELVSKLRQLVPEIRHRRSDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDADSAEAAIIRSLIMQ
        MSSRRSRQS  SRISDDQIIELVSKLRQLVPEIRHRR DKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTID+DSAEAAIIRSLIMQ
Subjt:  MSSRRSRQSGGSRISDDQIIELVSKLRQLVPEIRHRRSDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDADSAEAAIIRSLIMQ

A0A5A7T970 Transcription factor PRE63.1e-3695.6Show/hide
Query:  MSSRRSRQSGGSRISDDQIIELVSKLRQLVPEIRHRRSDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDADSAEAAIIRSLIMQ
        MSSRRSRQS  SRISDDQIIELVSKLRQLVPEIRHRR DKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTID+DSAEAAIIRSLIMQ
Subjt:  MSSRRSRQSGGSRISDDQIIELVSKLRQLVPEIRHRRSDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDADSAEAAIIRSLIMQ

A0A6J1BY51 transcription factor PRE61.5e-38100Show/hide
Query:  MSSRRSRQSGGSRISDDQIIELVSKLRQLVPEIRHRRSDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDADSAEAAIIRSLIMQ
        MSSRRSRQSGGSRISDDQIIELVSKLRQLVPEIRHRRSDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDADSAEAAIIRSLIMQ
Subjt:  MSSRRSRQSGGSRISDDQIIELVSKLRQLVPEIRHRRSDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDADSAEAAIIRSLIMQ

A0A6J1GKQ6 transcription factor PRE6-like8.9e-3693.41Show/hide
Query:  MSSRRSRQSGGSRISDDQIIELVSKLRQLVPEIRHRRSDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDADSAEAAIIRSLIMQ
        +S+RRSRQ G SRISDDQIIEL+SKLR LVPEIRHRRSDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDADSAEAAIIRSLIMQ
Subjt:  MSSRRSRQSGGSRISDDQIIELVSKLRQLVPEIRHRRSDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDADSAEAAIIRSLIMQ

SwissProt top hitse value%identityAlignment
B8APB5 Transcription factor ILI62.8e-2670.65Show/hide
Query:  MSSR--RSRQSGGSRISDDQIIELVSKLRQLVPEIRHRRSDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDADSAEAAIIRSLIM
        MSSR  RSRQSG SRI+D+QI +LVSKL+ L+PE R R +D+V +S+VLQETCNYIR+LH+EVDDLSERLS+LL+T D  SA+AAIIRSL+M
Subjt:  MSSR--RSRQSGGSRISDDQIIELVSKLRQLVPEIRHRRSDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDADSAEAAIIRSLIM

Q0DUR2 Transcription factor ILI62.8e-2670.65Show/hide
Query:  MSSR--RSRQSGGSRISDDQIIELVSKLRQLVPEIRHRRSDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDADSAEAAIIRSLIM
        MSSR  RSRQSG SRI+D+QI +LVSKL+ L+PE R R +D+V +S+VLQETCNYIR+LH+EVDDLSERLS+LL+T D  SA+AAIIRSL+M
Subjt:  MSSR--RSRQSGGSRISDDQIIELVSKLRQLVPEIRHRRSDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDADSAEAAIIRSLIM

Q8GW32 Transcription factor PRE61.1e-3079.35Show/hide
Query:  MSSR---RSRQSGGSRISDDQIIELVSKLRQLVPEIRHRRSDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDADSAEAAIIRSLI
        MSSR   RSRQSG SRISDDQI +LVSKL+ L+PE+R RRSDKVSASKVLQETCNYIRNLHREVDDLS+RLS+LL++ D +SAEAAIIRSL+
Subjt:  MSSR---RSRQSGGSRISDDQIIELVSKLRQLVPEIRHRRSDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDADSAEAAIIRSLI

Q9FLE9 Transcription factor PRE15.0e-2875Show/hide
Query:  MSSRRSRQSGGS-RISDDQIIELVSKLRQLVPEI-RHRRSDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDADSAEAAIIRSLIM
        MS+RRSRQS  + RISD+Q+I+LVSKLRQ++PEI + RRSDK SASKVLQETCNYIRNL+REVD+LSERLSQLL ++D DS EAA+IRSL+M
Subjt:  MSSRRSRQSGGS-RISDDQIIELVSKLRQLVPEI-RHRRSDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDADSAEAAIIRSLIM

Q9LJX1 Transcription factor PRE57.8e-2977.17Show/hide
Query:  MSSRRSRQ-SGGSRISDDQIIELVSKLRQLVPEI-RHRRSDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDADSAEAAIIRSLIM
        MS+RRSRQ S  SRISDDQ+I+LVSKLRQ +PEI   RRSDKVSASKVLQETCNYIR LHREVD+LS+RLSQLL ++D DS EAA+IRSL+M
Subjt:  MSSRRSRQ-SGGSRISDDQIIELVSKLRQLVPEI-RHRRSDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDADSAEAAIIRSLIM

Arabidopsis top hitse value%identityAlignment
AT1G26945.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein7.7e-3279.35Show/hide
Query:  MSSR---RSRQSGGSRISDDQIIELVSKLRQLVPEIRHRRSDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDADSAEAAIIRSLI
        MSSR   RSRQSG SRISDDQI +LVSKL+ L+PE+R RRSDKVSASKVLQETCNYIRNLHREVDDLS+RLS+LL++ D +SAEAAIIRSL+
Subjt:  MSSR---RSRQSGGSRISDDQIIELVSKLRQLVPEIRHRRSDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDADSAEAAIIRSLI

AT1G74500.1 activation-tagged BRI1(brassinosteroid-insensitive 1)-suppressor 11.1e-2568.42Show/hide
Query:  MSSRRSR---QSGGSRISDDQIIELVSKLRQLVPEIR-HRRSDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDADSAEAAIIRSLIMQ
        MS RRSR    SG SRIS+DQI +L+ KL+QL+PE+R  RRSDKVSA++VLQ+TCNYIRNLHREVDDLSERLS+LL+  ++D+A+AA+IRSL+ Q
Subjt:  MSSRRSR---QSGGSRISDDQIIELVSKLRQLVPEIR-HRRSDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDADSAEAAIIRSLIMQ

AT3G28857.1 basic helix-loop-helix (bHLH) DNA-binding family protein5.5e-3077.17Show/hide
Query:  MSSRRSRQ-SGGSRISDDQIIELVSKLRQLVPEI-RHRRSDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDADSAEAAIIRSLIM
        MS+RRSRQ S  SRISDDQ+I+LVSKLRQ +PEI   RRSDKVSASKVLQETCNYIR LHREVD+LS+RLSQLL ++D DS EAA+IRSL+M
Subjt:  MSSRRSRQ-SGGSRISDDQIIELVSKLRQLVPEI-RHRRSDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDADSAEAAIIRSLIM

AT5G15160.1 BANQUO 25.7e-2773.33Show/hide
Query:  SSRRSRQ-SGGSRISDDQIIELVSKLRQLVPEIR-HRRSDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDADSAEAAIIRSLI
        SSRRSRQ S  SRISDDQI +L+SKLRQ +PEIR +RRS+ VSASKVLQETCNYIRNL++E DDLS+RL+QLL +ID +S +AA+IRSLI
Subjt:  SSRRSRQ-SGGSRISDDQIIELVSKLRQLVPEIR-HRRSDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDADSAEAAIIRSLI

AT5G39860.1 basic helix-loop-helix (bHLH) DNA-binding family protein3.6e-2975Show/hide
Query:  MSSRRSRQSGGS-RISDDQIIELVSKLRQLVPEI-RHRRSDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDADSAEAAIIRSLIM
        MS+RRSRQS  + RISD+Q+I+LVSKLRQ++PEI + RRSDK SASKVLQETCNYIRNL+REVD+LSERLSQLL ++D DS EAA+IRSL+M
Subjt:  MSSRRSRQSGGS-RISDDQIIELVSKLRQLVPEI-RHRRSDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDADSAEAAIIRSLIM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTAGTAGAAGGTCCAGGCAGTCCGGAGGCTCCAGAATCAGCGATGACCAAATCATTGAACTTGTTTCTAAGCTTCGTCAACTCGTACCTGAGATTCGCCATCGTCG
CTCCGACAAGGTATCAGCTTCAAAAGTCCTCCAAGAGACCTGCAATTACATTAGAAACTTGCACAGGGAGGTTGATGACCTAAGTGAGAGACTCTCTCAGCTGTTGTCTA
CAATAGATGCTGATAGTGCAGAGGCAGCCATAATTAGGAGCTTAATTATGCAATAG
mRNA sequenceShow/hide mRNA sequence
ATGTCTAGTAGAAGGTCCAGGCAGTCCGGAGGCTCCAGAATCAGCGATGACCAAATCATTGAACTTGTTTCTAAGCTTCGTCAACTCGTACCTGAGATTCGCCATCGTCG
CTCCGACAAGGTATCAGCTTCAAAAGTCCTCCAAGAGACCTGCAATTACATTAGAAACTTGCACAGGGAGGTTGATGACCTAAGTGAGAGACTCTCTCAGCTGTTGTCTA
CAATAGATGCTGATAGTGCAGAGGCAGCCATAATTAGGAGCTTAATTATGCAATAG
Protein sequenceShow/hide protein sequence
MSSRRSRQSGGSRISDDQIIELVSKLRQLVPEIRHRRSDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDADSAEAAIIRSLIMQ