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Moc04g36870 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g36870
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description40S ribosomal protein S19
Genome locationchr4:27633230..27634613
RNA-Seq ExpressionMoc04g36870
SyntenyMoc04g36870
Gene Ontology termsGO:0000028 - ribosomal small subunit assembly (biological process)
GO:0006412 - translation (biological process)
GO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001266 - Ribosomal protein S19e
IPR018277 - Ribosomal protein S19e, conserved site
IPR036388 - Winged helix-like DNA-binding domain superfamily
IPR036390 - Winged helix DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593129.1 Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]1.2e-7397.2Show/hide
Query:  MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSQRNGSRPPHFCKSSGAI
        MATA+TVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGS+RNGSRPPHFC+SSGAI
Subjt:  MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSQRNGSRPPHFCKSSGAI

Query:  ARHILQQLQEMNIVDVDTKGGRRITSSGRRDLDQVAGRIVVAP
        ARHILQQLQEMNIVDVD KGGRRITSSGRRDLDQVAGRIVVAP
Subjt:  ARHILQQLQEMNIVDVDTKGGRRITSSGRRDLDQVAGRIVVAP

XP_022134553.1 40S ribosomal protein S19-3 [Momordica charantia]1.3e-75100Show/hide
Query:  MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSQRNGSRPPHFCKSSGAI
        MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSQRNGSRPPHFCKSSGAI
Subjt:  MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSQRNGSRPPHFCKSSGAI

Query:  ARHILQQLQEMNIVDVDTKGGRRITSSGRRDLDQVAGRIVVAP
        ARHILQQLQEMNIVDVDTKGGRRITSSGRRDLDQVAGRIVVAP
Subjt:  ARHILQQLQEMNIVDVDTKGGRRITSSGRRDLDQVAGRIVVAP

XP_022150295.1 40S ribosomal protein S19-3-like [Momordica charantia]2.4e-7498.6Show/hide
Query:  MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSQRNGSRPPHFCKSSGAI
        MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSQRNGSRPPHFCKSSGAI
Subjt:  MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSQRNGSRPPHFCKSSGAI

Query:  ARHILQQLQEMNIVDVDTKGGRRITSSGRRDLDQVAGRIVVAP
        ARHIL QLQEMNIVDVD KGGRRITSSGRRDLDQVAGRIVVAP
Subjt:  ARHILQQLQEMNIVDVDTKGGRRITSSGRRDLDQVAGRIVVAP

XP_022923365.1 40S ribosomal protein S19-3-like [Cucurbita moschata]5.4e-7497.9Show/hide
Query:  MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSQRNGSRPPHFCKSSGAI
        MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGS+RNGSRPPHFC+SSGAI
Subjt:  MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSQRNGSRPPHFCKSSGAI

Query:  ARHILQQLQEMNIVDVDTKGGRRITSSGRRDLDQVAGRIVVAP
        ARHILQQLQEMNIVDVD KGGRRITSSGRRDLDQVAGRIVVAP
Subjt:  ARHILQQLQEMNIVDVDTKGGRRITSSGRRDLDQVAGRIVVAP

XP_022954406.1 40S ribosomal protein S19-3-like [Cucurbita moschata]1.2e-7397.2Show/hide
Query:  MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSQRNGSRPPHFCKSSGAI
        MATA+TVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGS+RNGSRPPHFC+SSGAI
Subjt:  MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSQRNGSRPPHFCKSSGAI

Query:  ARHILQQLQEMNIVDVDTKGGRRITSSGRRDLDQVAGRIVVAP
        ARHILQQLQEMNIVDVD KGGRRITSSGRRDLDQVAGRIVVAP
Subjt:  ARHILQQLQEMNIVDVDTKGGRRITSSGRRDLDQVAGRIVVAP

TrEMBL top hitse value%identityAlignment
A0A6J1C2B0 40S ribosomal protein S19-36.2e-76100Show/hide
Query:  MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSQRNGSRPPHFCKSSGAI
        MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSQRNGSRPPHFCKSSGAI
Subjt:  MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSQRNGSRPPHFCKSSGAI

Query:  ARHILQQLQEMNIVDVDTKGGRRITSSGRRDLDQVAGRIVVAP
        ARHILQQLQEMNIVDVDTKGGRRITSSGRRDLDQVAGRIVVAP
Subjt:  ARHILQQLQEMNIVDVDTKGGRRITSSGRRDLDQVAGRIVVAP

A0A6J1D839 40S ribosomal protein S19-3-like1.2e-7498.6Show/hide
Query:  MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSQRNGSRPPHFCKSSGAI
        MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSQRNGSRPPHFCKSSGAI
Subjt:  MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSQRNGSRPPHFCKSSGAI

Query:  ARHILQQLQEMNIVDVDTKGGRRITSSGRRDLDQVAGRIVVAP
        ARHIL QLQEMNIVDVD KGGRRITSSGRRDLDQVAGRIVVAP
Subjt:  ARHILQQLQEMNIVDVDTKGGRRITSSGRRDLDQVAGRIVVAP

A0A6J1EBL3 40S ribosomal protein S19-3-like2.6e-7497.9Show/hide
Query:  MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSQRNGSRPPHFCKSSGAI
        MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGS+RNGSRPPHFC+SSGAI
Subjt:  MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSQRNGSRPPHFCKSSGAI

Query:  ARHILQQLQEMNIVDVDTKGGRRITSSGRRDLDQVAGRIVVAP
        ARHILQQLQEMNIVDVD KGGRRITSSGRRDLDQVAGRIVVAP
Subjt:  ARHILQQLQEMNIVDVDTKGGRRITSSGRRDLDQVAGRIVVAP

A0A6J1JTL0 40S ribosomal protein S19-3-like2.6e-7497.9Show/hide
Query:  MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSQRNGSRPPHFCKSSGAI
        MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGS+RNGSRPPHFC+SSGAI
Subjt:  MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSQRNGSRPPHFCKSSGAI

Query:  ARHILQQLQEMNIVDVDTKGGRRITSSGRRDLDQVAGRIVVAP
        ARHILQQLQEMNIVDVD KGGRRITSSGRRDLDQVAGRIVVAP
Subjt:  ARHILQQLQEMNIVDVDTKGGRRITSSGRRDLDQVAGRIVVAP

A0A6J1JTW8 40S ribosomal protein S19-3-like5.8e-7497.2Show/hide
Query:  MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSQRNGSRPPHFCKSSGAI
        MATA+TVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGS+RNGSRPPHFC+SSGAI
Subjt:  MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSQRNGSRPPHFCKSSGAI

Query:  ARHILQQLQEMNIVDVDTKGGRRITSSGRRDLDQVAGRIVVAP
        ARHILQQLQEMNIVDVD KGGRRITSSGRRDLDQVAGRIVVAP
Subjt:  ARHILQQLQEMNIVDVDTKGGRRITSSGRRDLDQVAGRIVVAP

SwissProt top hitse value%identityAlignment
P40978 40S ribosomal protein S192.0e-6381.43Show/hide
Query:  ATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSQRNGSRPPHFCKSSGAIA
        +TA+TVKDV+PHEFVKAY+AHLKRSGK+ELP W DIVKTARFKEL PYDPDWYY RAAS+ARKIYLR G+GVG F++IYGG QRNGSRPPHFCKSSGAI+
Subjt:  ATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSQRNGSRPPHFCKSSGAIA

Query:  RHILQQLQEMNIVDVDTKGGRRITSSGRRDLDQVAGRIVV
        R+ILQQLQ+M I+DVD KGGR ITS GRRDLDQVAGR+ V
Subjt:  RHILQQLQEMNIVDVDTKGGRRITSSGRRDLDQVAGRIVV

Q94613 40S ribosomal protein S195.5e-4557.46Show/hide
Query:  TVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSQRNGSRPPHFCKSSGAIARHIL
        +VKDVS HEF +A+AA LK+SGK+++P WTD VKT  FKEL+PY+PDWY++RAAS+ R +Y+R   G+G+F++IYGG +R G+ P HFCK++G+I+R +L
Subjt:  TVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSQRNGSRPPHFCKSSGAIARHIL

Query:  QQLQEMNIVDVDTKGGRRITSSGRRDLDQVAGRI
        Q L+ + IV+ D  GGRR+TS GRRDLD++A +I
Subjt:  QQLQEMNIVDVDTKGGRRITSSGRRDLDQVAGRI

Q9FNP8 40S ribosomal protein S19-34.9e-7087.32Show/hide
Query:  MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSQRNGSRPPHFCKSSGAI
        MAT KTVKDVSPHEFVKAYAAHLKRSGK+ELP WTDIVKT + KELAPYDPDWYY+RAASMARK+YLRGGLGVGAF+RIYGGS+RNGSRPPHFCKSSG +
Subjt:  MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSQRNGSRPPHFCKSSGAI

Query:  ARHILQQLQEMNIVDVDTKGGRRITSSGRRDLDQVAGRIVVA
        ARHILQQLQ MNIVD+DTKGGR+ITSSG+RDLDQVAGRI  A
Subjt:  ARHILQQLQEMNIVDVDTKGGRRITSSGRRDLDQVAGRIVVA

Q9LF30 40S ribosomal protein S19-22.7e-6887.77Show/hide
Query:  MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSQRNGSRPPHFCKSSGAI
        MAT KTVKDVSPH+FVKAYA+HLKRSGK+ELP WTDIVKT R KELAPYDPDWYY+RAASMARKIYLRGGLGVGAF+RIYGGS+RNGSRPPHFCKSSG I
Subjt:  MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSQRNGSRPPHFCKSSGAI

Query:  ARHILQQLQEMNIVDVDTKGGRRITSSGRRDLDQVAGRI
        ARHILQQL+ M+IV++DTKGGRRITSSG+RDLDQVAGRI
Subjt:  ARHILQQLQEMNIVDVDTKGGRRITSSGRRDLDQVAGRI

Q9SGA6 40S ribosomal protein S19-16.4e-7086.01Show/hide
Query:  MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSQRNGSRPPHFCKSSGAI
        MAT KTVKDVSPH+FVKAYA+HLKRSGK+ELP WTDIVKT + KELAPYDPDWYY+RAASMARK+YLRGGLGVGAF+RIYGGS+RNGSRPPHFCKSSG I
Subjt:  MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSQRNGSRPPHFCKSSGAI

Query:  ARHILQQLQEMNIVDVDTKGGRRITSSGRRDLDQVAGRIVVAP
        ARHILQQL+ MNIV++DTKGGRRITSSG+RDLDQVAGRI V P
Subjt:  ARHILQQLQEMNIVDVDTKGGRRITSSGRRDLDQVAGRIVVAP

Arabidopsis top hitse value%identityAlignment
AT3G02080.1 Ribosomal protein S19e family protein4.6e-7186.01Show/hide
Query:  MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSQRNGSRPPHFCKSSGAI
        MAT KTVKDVSPH+FVKAYA+HLKRSGK+ELP WTDIVKT + KELAPYDPDWYY+RAASMARK+YLRGGLGVGAF+RIYGGS+RNGSRPPHFCKSSG I
Subjt:  MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSQRNGSRPPHFCKSSGAI

Query:  ARHILQQLQEMNIVDVDTKGGRRITSSGRRDLDQVAGRIVVAP
        ARHILQQL+ MNIV++DTKGGRRITSSG+RDLDQVAGRI V P
Subjt:  ARHILQQLQEMNIVDVDTKGGRRITSSGRRDLDQVAGRIVVAP

AT5G15520.1 Ribosomal protein S19e family protein1.9e-6987.77Show/hide
Query:  MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSQRNGSRPPHFCKSSGAI
        MAT KTVKDVSPH+FVKAYA+HLKRSGK+ELP WTDIVKT R KELAPYDPDWYY+RAASMARKIYLRGGLGVGAF+RIYGGS+RNGSRPPHFCKSSG I
Subjt:  MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSQRNGSRPPHFCKSSGAI

Query:  ARHILQQLQEMNIVDVDTKGGRRITSSGRRDLDQVAGRI
        ARHILQQL+ M+IV++DTKGGRRITSSG+RDLDQVAGRI
Subjt:  ARHILQQLQEMNIVDVDTKGGRRITSSGRRDLDQVAGRI

AT5G61170.1 Ribosomal protein S19e family protein3.5e-7187.32Show/hide
Query:  MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSQRNGSRPPHFCKSSGAI
        MAT KTVKDVSPHEFVKAYAAHLKRSGK+ELP WTDIVKT + KELAPYDPDWYY+RAASMARK+YLRGGLGVGAF+RIYGGS+RNGSRPPHFCKSSG +
Subjt:  MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSQRNGSRPPHFCKSSGAI

Query:  ARHILQQLQEMNIVDVDTKGGRRITSSGRRDLDQVAGRIVVA
        ARHILQQLQ MNIVD+DTKGGR+ITSSG+RDLDQVAGRI  A
Subjt:  ARHILQQLQEMNIVDVDTKGGRRITSSGRRDLDQVAGRIVVA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACGGCAAAGACTGTGAAAGACGTCTCTCCTCACGAGTTCGTCAAGGCCTATGCGGCTCATCTTAAGAGATCTGGAAAGGTTGAACTTCCACCATGGACAGACAT
AGTTAAGACTGCAAGATTCAAAGAGCTTGCTCCTTATGACCCTGATTGGTATTATGTCAGAGCTGCATCCATGGCTAGGAAGATCTATTTGAGGGGAGGTCTCGGTGTGG
GGGCATTTAAGCGGATTTATGGTGGAAGCCAGAGGAATGGAAGTCGCCCACCACACTTCTGCAAAAGCAGTGGTGCTATTGCTCGTCATATTCTACAACAGTTGCAGGAA
ATGAACATTGTTGATGTTGATACCAAGGGTGGAAGAAGAATCACCTCAAGCGGACGACGGGATCTCGATCAAGTTGCTGGCCGCATTGTTGTTGCCCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGACGGCAAAGACTGTGAAAGACGTCTCTCCTCACGAGTTCGTCAAGGCCTATGCGGCTCATCTTAAGAGATCTGGAAAGGTTGAACTTCCACCATGGACAGACAT
AGTTAAGACTGCAAGATTCAAAGAGCTTGCTCCTTATGACCCTGATTGGTATTATGTCAGAGCTGCATCCATGGCTAGGAAGATCTATTTGAGGGGAGGTCTCGGTGTGG
GGGCATTTAAGCGGATTTATGGTGGAAGCCAGAGGAATGGAAGTCGCCCACCACACTTCTGCAAAAGCAGTGGTGCTATTGCTCGTCATATTCTACAACAGTTGCAGGAA
ATGAACATTGTTGATGTTGATACCAAGGGTGGAAGAAGAATCACCTCAAGCGGACGACGGGATCTCGATCAAGTTGCTGGCCGCATTGTTGTTGCCCCTTGA
Protein sequenceShow/hide protein sequence
MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSQRNGSRPPHFCKSSGAIARHILQQLQE
MNIVDVDTKGGRRITSSGRRDLDQVAGRIVVAP