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Moc04g36880 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g36880
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionTranscription factor UPBEAT1-like
Genome locationchr4:27641106..27641462
RNA-Seq ExpressionMoc04g36880
SyntenyMoc04g36880
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
InterPro domainsIPR044660 - Transcription factor IBH1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039441.1 transcription factor UPBEAT1-like [Cucumis melo var. makuwa]6.3e-2056.59Show/hide
Query:  MSSKTKILPNPLRNVRRR--------IKRRFCRRPCAFGGRNPVKYGETTSSSSLPCSSSDVAAKLEALESLIPAQTA---GEARKTEQLFKETADYIVL
        MSSKT  LPNPLRN RRR         +RRF RR  A         G     S+L C  S+V+ KLEAL+SLIP Q+A   G+ R+ ++LFK+TADYIV+
Subjt:  MSSKTKILPNPLRNVRRR--------IKRRFCRRPCAFGGRNPVKYGETTSSSSLPCSSSDVAAKLEALESLIPAQTA---GEARKTEQLFKETADYIVL

Query:  LKTQVVILQKLVDFFGSSCSDDAENAVVS
        LKTQVVILQKLVDFFGS+CS D+ +AVVS
Subjt:  LKTQVVILQKLVDFFGSSCSDDAENAVVS

KAG6578552.1 hypothetical protein SDJN03_23000, partial [Cucurbita argyrosperma subsp. sororia]1.8e-1962.16Show/hide
Query:  MSSKTKILPNPLRNVRRRI---KRRFCRRP-CAFGGRNPVKYGETTSSSSLPCSSSDVAAKLEALESLIPAQTAGEARKTEQLFKETADYIVLLKTQVVI
        MS KT  L N     +R +   +RRF RR   A    NP + G+TTSSS       DV+AKLEAL+SLIPAQ+A E R+TEQLFKETADYIVLLKTQVVI
Subjt:  MSSKTKILPNPLRNVRRRI---KRRFCRRP-CAFGGRNPVKYGETTSSSSLPCSSSDVAAKLEALESLIPAQTAGEARKTEQLFKETADYIVLLKTQVVI

Query:  LQKLVDFFGSS
        LQKLVDFFGS+
Subjt:  LQKLVDFFGSS

KAG7016112.1 hypothetical protein SDJN02_21216, partial [Cucurbita argyrosperma subsp. argyrosperma]8.2e-2063.06Show/hide
Query:  MSSKTKILPNPLRNVRRRI---KRRFCRRP-CAFGGRNPVKYGETTSSSSLPCSSSDVAAKLEALESLIPAQTAGEARKTEQLFKETADYIVLLKTQVVI
        MS KT  L N     +R +   +RRF RR   A    NP + GETTSSS       DV+AKLEAL+SLIPAQ+A E R+TEQLFKETADYIVLLKTQVVI
Subjt:  MSSKTKILPNPLRNVRRRI---KRRFCRRP-CAFGGRNPVKYGETTSSSSLPCSSSDVAAKLEALESLIPAQTAGEARKTEQLFKETADYIVLLKTQVVI

Query:  LQKLVDFFGSS
        LQKLVDFFGS+
Subjt:  LQKLVDFFGSS

XP_021605600.1 uncharacterized protein LOC110610041 [Manihot esculenta]1.7e-1245.38Show/hide
Query:  SSKTKILPNPLRNVRR----RIKRRFCRRPCAFGGRNPVKYGETTSSSSLPCSSSDVAAKLEALESLIPAQTAGEARKTEQLFKETADYIVLLKTQVVIL
        +SK  +   P R++RR    R +R + RRPC      P +   TT++     +++ V+AKLE L++LIPA   GE  K E LF+ETADYIVLLKTQV +L
Subjt:  SSKTKILPNPLRNVRR----RIKRRFCRRPCAFGGRNPVKYGETTSSSSLPCSSSDVAAKLEALESLIPAQTAGEARKTEQLFKETADYIVLLKTQVVIL

Query:  QKLVDFFGSSCSDDAENAV
        Q+LV+F+GS+ ++   NAV
Subjt:  QKLVDFFGSSCSDDAENAV

XP_022993697.1 uncharacterized protein LOC111489609 [Cucurbita maxima]4.8e-2063.16Show/hide
Query:  MSSKTKILPNPLRNVRRRIKRRFCRRPCAFGGRNPVKYGETTSSSSLPCSSS-------DVAAKLEALESLIPAQTAGEARKTEQLFKETADYIVLLKTQ
        M+ KT  L N     +R +     R P      NP +YGETTSSS  PCSSS       DV+AKLEAL+SLIPAQ+A EAR+TEQLFKETADYIVLLKTQ
Subjt:  MSSKTKILPNPLRNVRRRIKRRFCRRPCAFGGRNPVKYGETTSSSSLPCSSS-------DVAAKLEALESLIPAQTAGEARKTEQLFKETADYIVLLKTQ

Query:  VVILQKLVDFFGSS
        VVILQKLVDFFGS+
Subjt:  VVILQKLVDFFGSS

TrEMBL top hitse value%identityAlignment
A0A2C9WB72 Uncharacterized protein8.1e-1345.38Show/hide
Query:  SSKTKILPNPLRNVRR----RIKRRFCRRPCAFGGRNPVKYGETTSSSSLPCSSSDVAAKLEALESLIPAQTAGEARKTEQLFKETADYIVLLKTQVVIL
        +SK  +   P R++RR    R +R + RRPC      P +   TT++     +++ V+AKLE L++LIPA   GE  K E LF+ETADYIVLLKTQV +L
Subjt:  SSKTKILPNPLRNVRR----RIKRRFCRRPCAFGGRNPVKYGETTSSSSLPCSSSDVAAKLEALESLIPAQTAGEARKTEQLFKETADYIVLLKTQVVIL

Query:  QKLVDFFGSSCSDDAENAV
        Q+LV+F+GS+ ++   NAV
Subjt:  QKLVDFFGSSCSDDAENAV

A0A5A7UT08 Transcription factor UPBEAT1-like5.8e-1152.38Show/hide
Query:  VKYGETTSSSSLPCSSSDVAAKLEALESLIPAQTAGE-ARKTEQLFKETADYIVLLKTQVVILQKLVDFFGSSCSDDAENAVVS
        V+ G    +  + C +SD++AKLE+L+SLIP+++  E  R+ E LFK+TADYIVLLK+QV +LQ+L++F+G   SDD ENAV S
Subjt:  VKYGETTSSSSLPCSSSDVAAKLEALESLIPAQTAGE-ARKTEQLFKETADYIVLLKTQVVILQKLVDFFGSSCSDDAENAVVS

A0A5D3BNP5 Transcription factor UPBEAT1-like3.1e-2056.59Show/hide
Query:  MSSKTKILPNPLRNVRRR--------IKRRFCRRPCAFGGRNPVKYGETTSSSSLPCSSSDVAAKLEALESLIPAQTA---GEARKTEQLFKETADYIVL
        MSSKT  LPNPLRN RRR         +RRF RR  A         G     S+L C  S+V+ KLEAL+SLIP Q+A   G+ R+ ++LFK+TADYIV+
Subjt:  MSSKTKILPNPLRNVRRR--------IKRRFCRRPCAFGGRNPVKYGETTSSSSLPCSSSDVAAKLEALESLIPAQTA---GEARKTEQLFKETADYIVL

Query:  LKTQVVILQKLVDFFGSSCSDDAENAVVS
        LKTQVVILQKLVDFFGS+CS D+ +AVVS
Subjt:  LKTQVVILQKLVDFFGSSCSDDAENAVVS

A0A6J1JTK8 uncharacterized protein LOC1114896092.3e-2063.16Show/hide
Query:  MSSKTKILPNPLRNVRRRIKRRFCRRPCAFGGRNPVKYGETTSSSSLPCSSS-------DVAAKLEALESLIPAQTAGEARKTEQLFKETADYIVLLKTQ
        M+ KT  L N     +R +     R P      NP +YGETTSSS  PCSSS       DV+AKLEAL+SLIPAQ+A EAR+TEQLFKETADYIVLLKTQ
Subjt:  MSSKTKILPNPLRNVRRRIKRRFCRRPCAFGGRNPVKYGETTSSSSLPCSSS-------DVAAKLEALESLIPAQTAGEARKTEQLFKETADYIVLLKTQ

Query:  VVILQKLVDFFGSS
        VVILQKLVDFFGS+
Subjt:  VVILQKLVDFFGSS

B9SJE1 Uncharacterized protein2.6e-1147.27Show/hide
Query:  LRNVRRR---IKRRFCRRPCAFGGRNPVKYGETTSSSSLPCSSSDVAAKLEALESLIPAQTAGEARKTEQLFKETADYIVLLKTQVVILQKLVDFFGSSC
        L   RRR   ++RR C++                +  S  CSSS V+ KLEAL++LIPA   GE  K +QLF+ETADYIVLL+TQV +LQ+L+ F+GSS 
Subjt:  LRNVRRR---IKRRFCRRPCAFGGRNPVKYGETTSSSSLPCSSSDVAAKLEALESLIPAQTAGEARKTEQLFKETADYIVLLKTQVVILQKLVDFFGSSC

Query:  SD-DAENAVV
        ++ D ENAV+
Subjt:  SD-DAENAVV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G29370.1 unknown protein1.0e-0746.88Show/hide
Query:  VAAKLEALESLIPAQTAGEARKTEQLFKETADYIVLLKTQVVILQKLVDFFGSSCSDDAENAVV
        V  KL AL+SL+P        +TE+LF+ETA+YIV L+TQVV+L+KL++ + +S SD  ++ V+
Subjt:  VAAKLEALESLIPAQTAGEARKTEQLFKETADYIVLLKTQVVILQKLVDFFGSSCSDDAENAVV

AT5G39240.1 unknown protein1.0e-0738.24Show/hide
Query:  GGRNPVKYGETTSSSSLPCSSSDVAAKLEALESLIP--------------AQTAGEARKTEQLFKETADYIVLLKTQVVILQKLVDFFGSSCSDDAENAV
        G R   K+G   +S          + KL+AL+SL+P               +      +TEQLF+ETADYIV L+ QVV+LQKL++ +GS  SD  E+  
Subjt:  GGRNPVKYGETTSSSSLPCSSSDVAAKLEALESLIP--------------AQTAGEARKTEQLFKETADYIVLLKTQVVILQKLVDFFGSSCSDDAENAV

Query:  VS
        VS
Subjt:  VS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCTCCAAAACGAAGATTCTCCCAAATCCTCTCAGAAATGTCAGAAGAAGAATCAAAAGGAGGTTTTGCCGCCGTCCCTGCGCTTTCGGAGGCCGGAATCCCGTCAA
ATATGGCGAAACAACGTCGTCGTCGTCGCTGCCGTGCTCCTCCTCCGACGTGGCGGCTAAATTGGAGGCTCTGGAGAGCCTCATTCCGGCGCAAACTGCCGGCGAAGCCC
GCAAAACGGAGCAGTTGTTCAAGGAAACTGCGGATTACATTGTTCTATTGAAAACCCAGGTCGTGATTTTGCAGAAGCTGGTCGATTTTTTTGGATCCAGCTGCAGTGAC
GACGCAGAAAACGCCGTCGTTTCATAG
mRNA sequenceShow/hide mRNA sequence
ATGAGCTCCAAAACGAAGATTCTCCCAAATCCTCTCAGAAATGTCAGAAGAAGAATCAAAAGGAGGTTTTGCCGCCGTCCCTGCGCTTTCGGAGGCCGGAATCCCGTCAA
ATATGGCGAAACAACGTCGTCGTCGTCGCTGCCGTGCTCCTCCTCCGACGTGGCGGCTAAATTGGAGGCTCTGGAGAGCCTCATTCCGGCGCAAACTGCCGGCGAAGCCC
GCAAAACGGAGCAGTTGTTCAAGGAAACTGCGGATTACATTGTTCTATTGAAAACCCAGGTCGTGATTTTGCAGAAGCTGGTCGATTTTTTTGGATCCAGCTGCAGTGAC
GACGCAGAAAACGCCGTCGTTTCATAG
Protein sequenceShow/hide protein sequence
MSSKTKILPNPLRNVRRRIKRRFCRRPCAFGGRNPVKYGETTSSSSLPCSSSDVAAKLEALESLIPAQTAGEARKTEQLFKETADYIVLLKTQVVILQKLVDFFGSSCSD
DAENAVVS