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Moc04g37030 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g37030
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptionribosome biogenesis protein BOP1 homolog isoform X1
Genome locationchr4:27727970..27730841
RNA-Seq ExpressionMoc04g37030
SyntenyMoc04g37030
Gene Ontology termsNA
InterPro domainsIPR019351 - Protein of unknown function DUF2039


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6602535.1 Eukaryotic translation initiation factor 3 subunit M, partial [Cucurbita argyrosperma subsp. sororia]7.9e-7981.09Show/hide
Query:  AKAGPPKHQNRYAWKPNAGVKINETEVGGRFRPLSQITGVCLRCKDQIDWKRRYGKYKPLAEPAKCQLCSKRAVRQAYHNLCPGCAKEQGVCAKCRCRVD
        +K G PKHQN+YAWKPNAG KINETEVGGRFRPLS+ITGVCLRCKDQIDWKRRYGKYKPL+EPAKCQLCSKRAVRQAYHNLCPGCAK+QGVCAKCRCRVD
Subjt:  AKAGPPKHQNRYAWKPNAGVKINETEVGGRFRPLSQITGVCLRCKDQIDWKRRYGKYKPLAEPAKCQLCSKRAVRQAYHNLCPGCAKEQGVCAKCRCRVD

Query:  HTVGRDASEVEAEQKMLQEAIRNARERDKRTLLRAMNKGKSKTSDKSKSAVKEETKVGDLTP-SIEEHAKLGRKE--DDNDITDGSNEDSDENEDEDENE
         T+GRD SEVEAEQKMLQEAI+NARERDKRTLLRAM KGKSKTS+K+KSA  EE+K GD  P S EE A LGR E  DDN+ TD ++ED+ E+EDE ENE
Subjt:  HTVGRDASEVEAEQKMLQEAIRNARERDKRTLLRAMNKGKSKTSDKSKSAVKEETKVGDLTP-SIEEHAKLGRKE--DDNDITDGSNEDSDENEDEDENE

Query:  D
        +
Subjt:  D

KAG7033212.1 hypothetical protein SDJN02_07266 [Cucurbita argyrosperma subsp. argyrosperma]7.9e-7981.09Show/hide
Query:  AKAGPPKHQNRYAWKPNAGVKINETEVGGRFRPLSQITGVCLRCKDQIDWKRRYGKYKPLAEPAKCQLCSKRAVRQAYHNLCPGCAKEQGVCAKCRCRVD
        +K G PKHQN+YAWKPNAG KINETEVGGRFRPLS+ITGVCLRCKDQIDWKRRYGKYKPL+EPAKCQLCSKRAVRQAYHNLCPGCAK+QGVCAKCRCRVD
Subjt:  AKAGPPKHQNRYAWKPNAGVKINETEVGGRFRPLSQITGVCLRCKDQIDWKRRYGKYKPLAEPAKCQLCSKRAVRQAYHNLCPGCAKEQGVCAKCRCRVD

Query:  HTVGRDASEVEAEQKMLQEAIRNARERDKRTLLRAMNKGKSKTSDKSKSAVKEETKVGDLTP-SIEEHAKLGRKE--DDNDITDGSNEDSDENEDEDENE
         T+GRD SEVEAEQKMLQEAI+NARERDKRTLLRAM KGKSKTS+K+KSA  EE+K GD  P S EE A LGR E  DDN+ TD ++ED+ E+EDE ENE
Subjt:  HTVGRDASEVEAEQKMLQEAIRNARERDKRTLLRAMNKGKSKTSDKSKSAVKEETKVGDLTP-SIEEHAKLGRKE--DDNDITDGSNEDSDENEDEDENE

Query:  D
        +
Subjt:  D

XP_008459394.1 PREDICTED: uncharacterized protein LOC103498541 [Cucumis melo]1.7e-8182.32Show/hide
Query:  KAGPPKHQNRYAWKPNAGVKINETEVGGRFRPLSQITGVCLRCKDQIDWKRRYGKYKPLAEPAKCQLCSKRAVRQAYHNLCPGCAKEQGVCAKCRCRVDH
        K GPPKHQNRYAWKPNAG KINETEVGGRFRPLS ITGVCLRCKDQIDWKRRYGKYKPL+EPAKCQLCSKR VRQAYHNLCPGCAKEQGVCAKCRCRVD 
Subjt:  KAGPPKHQNRYAWKPNAGVKINETEVGGRFRPLSQITGVCLRCKDQIDWKRRYGKYKPLAEPAKCQLCSKRAVRQAYHNLCPGCAKEQGVCAKCRCRVDH

Query:  TVGRDASEVEAEQKMLQEAIRNARERDKRTLLRAMNKGKSKTSDKSKSAVKEETKVGDLTPS-IEEHAKLGRKEDDNDITDGSNEDSDENEDEDENED
        TVGRD SEVEAEQKMLQEAI+NARERD+RTLLRAM KGK+K+S+K+KSAV EETKVGD   S  E+ A++GR EDDN+ITD +++D+ ENEDE E E+
Subjt:  TVGRDASEVEAEQKMLQEAIRNARERDKRTLLRAMNKGKSKTSDKSKSAVKEETKVGDLTPS-IEEHAKLGRKEDDNDITDGSNEDSDENEDEDENED

XP_022133854.1 uncharacterized protein LOC111006305 [Momordica charantia]1.3e-105100Show/hide
Query:  MSSKAKAGPPKHQNRYAWKPNAGVKINETEVGGRFRPLSQITGVCLRCKDQIDWKRRYGKYKPLAEPAKCQLCSKRAVRQAYHNLCPGCAKEQGVCAKCR
        MSSKAKAGPPKHQNRYAWKPNAGVKINETEVGGRFRPLSQITGVCLRCKDQIDWKRRYGKYKPLAEPAKCQLCSKRAVRQAYHNLCPGCAKEQGVCAKCR
Subjt:  MSSKAKAGPPKHQNRYAWKPNAGVKINETEVGGRFRPLSQITGVCLRCKDQIDWKRRYGKYKPLAEPAKCQLCSKRAVRQAYHNLCPGCAKEQGVCAKCR

Query:  CRVDHTVGRDASEVEAEQKMLQEAIRNARERDKRTLLRAMNKGKSKTSDKSKSAVKEETKVGDLTPSIEEHAKLGRKEDDNDITDGSNEDSDENEDEDEN
        CRVDHTVGRDASEVEAEQKMLQEAIRNARERDKRTLLRAMNKGKSKTSDKSKSAVKEETKVGDLTPSIEEHAKLGRKEDDNDITDGSNEDSDENEDEDEN
Subjt:  CRVDHTVGRDASEVEAEQKMLQEAIRNARERDKRTLLRAMNKGKSKTSDKSKSAVKEETKVGDLTPSIEEHAKLGRKEDDNDITDGSNEDSDENEDEDEN

Query:  ED
        ED
Subjt:  ED

XP_022990906.1 ribosome biogenesis protein BOP1 homolog isoform X1 [Cucurbita maxima]1.2e-7981.59Show/hide
Query:  AKAGPPKHQNRYAWKPNAGVKINETEVGGRFRPLSQITGVCLRCKDQIDWKRRYGKYKPLAEPAKCQLCSKRAVRQAYHNLCPGCAKEQGVCAKCRCRVD
        +K G PKHQN+YAWKPNAG KINETEVGGRFRPLS+ITGVCLRCKDQIDWKRRYGKYKPL+EPAKCQLCSKRAVRQAYHNLCPGCAK+QGVCAKCRCRVD
Subjt:  AKAGPPKHQNRYAWKPNAGVKINETEVGGRFRPLSQITGVCLRCKDQIDWKRRYGKYKPLAEPAKCQLCSKRAVRQAYHNLCPGCAKEQGVCAKCRCRVD

Query:  HTVGRDASEVEAEQKMLQEAIRNARERDKRTLLRAMNKGKSKTSDKSKSAVKEETKVGDLTP-SIEEHAKLGRKE--DDNDITDGSNEDSDENEDEDENE
         T+GRD SEVEAEQKMLQEAI+NARERDKRTLLRAM KGKSKTS+K+KSA  EE+K GD  P S EE A LGR E  DDN+ TDG++ED+ E+EDE ENE
Subjt:  HTVGRDASEVEAEQKMLQEAIRNARERDKRTLLRAMNKGKSKTSDKSKSAVKEETKVGDLTP-SIEEHAKLGRKE--DDNDITDGSNEDSDENEDEDENE

Query:  D
        +
Subjt:  D

TrEMBL top hitse value%identityAlignment
A0A0A0KSJ8 Uncharacterized protein8.5e-7980.3Show/hide
Query:  KAGPPKHQNRYAWKPNAGVKINETEVGGRFRPLSQITGVCLRCKDQIDWKRRYGKYKPLAEPAKCQLCSKRAVRQAYHNLCPGCAKEQGVCAKCRCRVDH
        K GPPKHQN+YAWKPNAG KINETEVGGRFRPLS ITGVCLRCKDQIDWKRRYGKYKPL+EP KCQLCSKR VRQAYHNLCPGCAKEQGVCAKCRCRVD 
Subjt:  KAGPPKHQNRYAWKPNAGVKINETEVGGRFRPLSQITGVCLRCKDQIDWKRRYGKYKPLAEPAKCQLCSKRAVRQAYHNLCPGCAKEQGVCAKCRCRVDH

Query:  TVGRDASEVEAEQKMLQEAIRNARERDKRTLLRAMNKGKSKTSDKSKSAVKEETKVGDLTPS-IEEHAKLGRKEDDNDITDGSNEDSDENEDEDENED
        TVGRD SEVEAEQKMLQEAI+NARERD+RTLLRAM KGK+K+S+K+KSAV+EETK GD   S  E  A++GR EDDN+ TD ++ D+ ENEDE E E+
Subjt:  TVGRDASEVEAEQKMLQEAIRNARERDKRTLLRAMNKGKSKTSDKSKSAVKEETKVGDLTPS-IEEHAKLGRKEDDNDITDGSNEDSDENEDEDENED

A0A1S3CAL0 uncharacterized protein LOC1034985418.2e-8282.32Show/hide
Query:  KAGPPKHQNRYAWKPNAGVKINETEVGGRFRPLSQITGVCLRCKDQIDWKRRYGKYKPLAEPAKCQLCSKRAVRQAYHNLCPGCAKEQGVCAKCRCRVDH
        K GPPKHQNRYAWKPNAG KINETEVGGRFRPLS ITGVCLRCKDQIDWKRRYGKYKPL+EPAKCQLCSKR VRQAYHNLCPGCAKEQGVCAKCRCRVD 
Subjt:  KAGPPKHQNRYAWKPNAGVKINETEVGGRFRPLSQITGVCLRCKDQIDWKRRYGKYKPLAEPAKCQLCSKRAVRQAYHNLCPGCAKEQGVCAKCRCRVDH

Query:  TVGRDASEVEAEQKMLQEAIRNARERDKRTLLRAMNKGKSKTSDKSKSAVKEETKVGDLTPS-IEEHAKLGRKEDDNDITDGSNEDSDENEDEDENED
        TVGRD SEVEAEQKMLQEAI+NARERD+RTLLRAM KGK+K+S+K+KSAV EETKVGD   S  E+ A++GR EDDN+ITD +++D+ ENEDE E E+
Subjt:  TVGRDASEVEAEQKMLQEAIRNARERDKRTLLRAMNKGKSKTSDKSKSAVKEETKVGDLTPS-IEEHAKLGRKEDDNDITDGSNEDSDENEDEDENED

A0A6J1BX54 uncharacterized protein LOC1110063056.2e-106100Show/hide
Query:  MSSKAKAGPPKHQNRYAWKPNAGVKINETEVGGRFRPLSQITGVCLRCKDQIDWKRRYGKYKPLAEPAKCQLCSKRAVRQAYHNLCPGCAKEQGVCAKCR
        MSSKAKAGPPKHQNRYAWKPNAGVKINETEVGGRFRPLSQITGVCLRCKDQIDWKRRYGKYKPLAEPAKCQLCSKRAVRQAYHNLCPGCAKEQGVCAKCR
Subjt:  MSSKAKAGPPKHQNRYAWKPNAGVKINETEVGGRFRPLSQITGVCLRCKDQIDWKRRYGKYKPLAEPAKCQLCSKRAVRQAYHNLCPGCAKEQGVCAKCR

Query:  CRVDHTVGRDASEVEAEQKMLQEAIRNARERDKRTLLRAMNKGKSKTSDKSKSAVKEETKVGDLTPSIEEHAKLGRKEDDNDITDGSNEDSDENEDEDEN
        CRVDHTVGRDASEVEAEQKMLQEAIRNARERDKRTLLRAMNKGKSKTSDKSKSAVKEETKVGDLTPSIEEHAKLGRKEDDNDITDGSNEDSDENEDEDEN
Subjt:  CRVDHTVGRDASEVEAEQKMLQEAIRNARERDKRTLLRAMNKGKSKTSDKSKSAVKEETKVGDLTPSIEEHAKLGRKEDDNDITDGSNEDSDENEDEDEN

Query:  ED
        ED
Subjt:  ED

A0A6J1GR32 glutamic acid-rich protein isoform X15.0e-7980.69Show/hide
Query:  AKAGPPKHQNRYAWKPNAGVKINETEVGGRFRPLSQITGVCLRCKDQIDWKRRYGKYKPLAEPAKCQLCSKRAVRQAYHNLCPGCAKEQGVCAKCRCRVD
        +K G PKHQN+YAWKPNAG KINETEVGGRFRPLS+ITGVCLRCKDQIDWKRRYGKYKPL+EPAKCQLCSKRAVRQAYHNLCPGCAK+QGVCAKCRCRVD
Subjt:  AKAGPPKHQNRYAWKPNAGVKINETEVGGRFRPLSQITGVCLRCKDQIDWKRRYGKYKPLAEPAKCQLCSKRAVRQAYHNLCPGCAKEQGVCAKCRCRVD

Query:  HTVGRDASEVEAEQKMLQEAIRNARERDKRTLLRAMNKGKSKTSDKSKSAVKEETKVGDLTP-SIEEHAKLGRKE---DDNDITDGSNEDSDENEDEDEN
         T+GRD SEVEAEQKMLQEAI+NARERDKRTLLRAM KGKSKTS+K+KSA  EE+K GD  P S EE A LGR E   DDN+ TD ++ED+ E+EDE EN
Subjt:  HTVGRDASEVEAEQKMLQEAIRNARERDKRTLLRAMNKGKSKTSDKSKSAVKEETKVGDLTP-SIEEHAKLGRKE---DDNDITDGSNEDSDENEDEDEN

Query:  ED
        E+
Subjt:  ED

A0A6J1JP90 ribosome biogenesis protein BOP1 homolog isoform X15.9e-8081.59Show/hide
Query:  AKAGPPKHQNRYAWKPNAGVKINETEVGGRFRPLSQITGVCLRCKDQIDWKRRYGKYKPLAEPAKCQLCSKRAVRQAYHNLCPGCAKEQGVCAKCRCRVD
        +K G PKHQN+YAWKPNAG KINETEVGGRFRPLS+ITGVCLRCKDQIDWKRRYGKYKPL+EPAKCQLCSKRAVRQAYHNLCPGCAK+QGVCAKCRCRVD
Subjt:  AKAGPPKHQNRYAWKPNAGVKINETEVGGRFRPLSQITGVCLRCKDQIDWKRRYGKYKPLAEPAKCQLCSKRAVRQAYHNLCPGCAKEQGVCAKCRCRVD

Query:  HTVGRDASEVEAEQKMLQEAIRNARERDKRTLLRAMNKGKSKTSDKSKSAVKEETKVGDLTP-SIEEHAKLGRKE--DDNDITDGSNEDSDENEDEDENE
         T+GRD SEVEAEQKMLQEAI+NARERDKRTLLRAM KGKSKTS+K+KSA  EE+K GD  P S EE A LGR E  DDN+ TDG++ED+ E+EDE ENE
Subjt:  HTVGRDASEVEAEQKMLQEAIRNARERDKRTLLRAMNKGKSKTSDKSKSAVKEETKVGDLTP-SIEEHAKLGRKE--DDNDITDGSNEDSDENEDEDENE

Query:  D
        +
Subjt:  D

SwissProt top hitse value%identityAlignment
Q68FU5 Uncharacterized protein C9orf85 homolog7.0e-1437.89Show/hide
Query:  KAGPPKHQNRYAWKPNAGVKINET-EVGGRFRPLSQITGVCLRCKDQIDWKRRYGKYKPLAEPAKCQLCSKRAVRQAYHNLCPGCAKEQGVCAKC
        ++ P KHQN + +K +   K  +T ++  +        GVC RCK+ ++W+ +Y KYKPL++P KC  C ++ V+ +YH +C  CA +  VCAKC
Subjt:  KAGPPKHQNRYAWKPNAGVKINET-EVGGRFRPLSQITGVCLRCKDQIDWKRRYGKYKPLAEPAKCQLCSKRAVRQAYHNLCPGCAKEQGVCAKC

Q96MD7 Uncharacterized protein C9orf856.4e-1538.61Show/hide
Query:  AKAGPPKHQNRYAWKPNAGVKINET-EVGGRFRPLSQITGVCLRCKDQIDWKRRYGKYKPLAEPAKCQLCSKRAVRQAYHNLCPGCAKEQGVCAKCRCRV
        A++ P KHQN +++K +   K  +T ++  +        GVC RCK+ ++W+ +Y KYKPL++P KC  C ++ V+ +YH +C  CA E  VCAKC  + 
Subjt:  AKAGPPKHQNRYAWKPNAGVKINET-EVGGRFRPLSQITGVCLRCKDQIDWKRRYGKYKPLAEPAKCQLCSKRAVRQAYHNLCPGCAKEQGVCAKCRCRV

Query:  D
        D
Subjt:  D

Q9CQ90 Uncharacterized protein C9orf85 homolog2.4e-1438.95Show/hide
Query:  KAGPPKHQNRYAWKPNAGVKINET-EVGGRFRPLSQITGVCLRCKDQIDWKRRYGKYKPLAEPAKCQLCSKRAVRQAYHNLCPGCAKEQGVCAKC
        ++ P KHQN + +K +   K  +T ++  +        GVC RCK+ ++W+ +Y KYKPL++P KC  C ++ V+ +YH +C  CA E  VCAKC
Subjt:  KAGPPKHQNRYAWKPNAGVKINET-EVGGRFRPLSQITGVCLRCKDQIDWKRRYGKYKPLAEPAKCQLCSKRAVRQAYHNLCPGCAKEQGVCAKC

Arabidopsis top hitse value%identityAlignment
AT3G02220.1 unknown protein1.1e-5758.1Show/hide
Query:  AKAGPPKHQNRYAWKPNAGVKINETEVGGRFRPLSQITGVCLRCKDQIDWKRRYGKYKPLAEPAKCQLCSKRAVRQAYHNLCPGCAKEQGVCAKCRCRVD
        ++ GPPKHQN++AW P AGVKINETEVGGRFRPLS+ITGVC RC++QI WKR+YGKYK L E  KCQ C+KR VRQAYH LCPGCAKEQ VCAKC   VD
Subjt:  AKAGPPKHQNRYAWKPNAGVKINETEVGGRFRPLSQITGVCLRCKDQIDWKRRYGKYKPLAEPAKCQLCSKRAVRQAYHNLCPGCAKEQGVCAKCRCRVD

Query:  HTVGRDASEVEAEQKMLQEAIRNARERDKRTLLRAMNKGKSKTSDKSKSAVKEETKVGDLTP--SIEEHA-KLGR----------KEDDNDITDGSNEDS
          +GRD  EVEAEQK+L E I+NARERD+RTLLRAMNK         +++  + +KVGD+ P  S+EE+A K GR           +  +D   G   D 
Subjt:  HTVGRDASEVEAEQKMLQEAIRNARERDKRTLLRAMNKGKSKTSDKSKSAVKEETKVGDLTP--SIEEHA-KLGR----------KEDDNDITDGSNEDS

Query:  DENEDEDENE
        D+N  +DE++
Subjt:  DENEDEDENE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCAGCAAGGCAAAGGCAGGCCCCCCGAAGCACCAAAACAGATACGCCTGGAAACCAAACGCCGGCGTCAAAATCAACGAAACTGAGGTTGGAGGCAGGTTCCGCCC
GCTTTCCCAGATCACCGGAGTTTGCCTTCGCTGCAAGGACCAAATCGATTGGAAACGCCGCTACGGCAAGTACAAACCCCTTGCCGAACCCGCCAAATGTCAACTATGTT
CCAAGCGGGCTGTTCGTCAAGCCTATCATAATCTCTGCCCTGGCTGTGCCAAAGAGCAAGGTGTGTGCGCGAAGTGTCGTTGTCGTGTAGACCATACTGTTGGAAGGGAT
GCTTCTGAAGTTGAGGCTGAGCAAAAGATGCTTCAAGAGGCCATAAGGAATGCTCGAGAAAGGGATAAAAGAACTCTATTACGTGCTATGAACAAAGGGAAAAGTAAGAC
TTCGGATAAAAGTAAATCAGCCGTTAAAGAAGAAACTAAGGTTGGGGATTTGACTCCGTCAATAGAAGAGCATGCTAAATTGGGCAGAAAGGAGGATGACAATGATATTA
CAGATGGCAGCAATGAAGACAGCGACGAAAACGAAGATGAGGATGAAAATGAGGATTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGCAGCAAGGCAAAGGCAGGCCCCCCGAAGCACCAAAACAGATACGCCTGGAAACCAAACGCCGGCGTCAAAATCAACGAAACTGAGGTTGGAGGCAGGTTCCGCCC
GCTTTCCCAGATCACCGGAGTTTGCCTTCGCTGCAAGGACCAAATCGATTGGAAACGCCGCTACGGCAAGTACAAACCCCTTGCCGAACCCGCCAAATGTCAACTATGTT
CCAAGCGGGCTGTTCGTCAAGCCTATCATAATCTCTGCCCTGGCTGTGCCAAAGAGCAAGGTGTGTGCGCGAAGTGTCGTTGTCGTGTAGACCATACTGTTGGAAGGGAT
GCTTCTGAAGTTGAGGCTGAGCAAAAGATGCTTCAAGAGGCCATAAGGAATGCTCGAGAAAGGGATAAAAGAACTCTATTACGTGCTATGAACAAAGGGAAAAGTAAGAC
TTCGGATAAAAGTAAATCAGCCGTTAAAGAAGAAACTAAGGTTGGGGATTTGACTCCGTCAATAGAAGAGCATGCTAAATTGGGCAGAAAGGAGGATGACAATGATATTA
CAGATGGCAGCAATGAAGACAGCGACGAAAACGAAGATGAGGATGAAAATGAGGATTAG
Protein sequenceShow/hide protein sequence
MSSKAKAGPPKHQNRYAWKPNAGVKINETEVGGRFRPLSQITGVCLRCKDQIDWKRRYGKYKPLAEPAKCQLCSKRAVRQAYHNLCPGCAKEQGVCAKCRCRVDHTVGRD
ASEVEAEQKMLQEAIRNARERDKRTLLRAMNKGKSKTSDKSKSAVKEETKVGDLTPSIEEHAKLGRKEDDNDITDGSNEDSDENEDEDENED