; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc04g37780 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g37780
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description40S ribosomal protein S26
Genome locationchr4:28321063..28326024
RNA-Seq ExpressionMoc04g37780
SyntenyMoc04g37780
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR000892 - Ribosomal protein S26e
IPR038551 - Ribosomal protein S26e superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008456772.1 PREDICTED: 40S ribosomal protein S26-3-like [Cucumis melo]3.4e-6296.8Show/hide
Query:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQRF
        TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRR R+PPQRF
Subjt:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQRF

Query:  IRRRDDAPKPGQPGQAPRVGAGTAP
        IRRRDDAPKPGQPGQ PRVGAG AP
Subjt:  IRRRDDAPKPGQPGQAPRVGAGTAP

XP_022134511.1 40S ribosomal protein S26-1-like [Momordica charantia]6.5e-66100Show/hide
Query:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQRF
        TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQRF
Subjt:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQRF

Query:  IRRRDDAPKPGQPGQAPRVGAGTAPRT
        IRRRDDAPKPGQPGQAPRVGAGTAPRT
Subjt:  IRRRDDAPKPGQPGQAPRVGAGTAPRT

XP_022923523.1 40S ribosomal protein S26-3-like [Cucurbita moschata]4.4e-6298.36Show/hide
Query:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQRF
        TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKR+PPQRF
Subjt:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQRF

Query:  IRRRDDAPKPGQPGQAPRVGAG
        IRRRDD PKPGQPGQAPRVGAG
Subjt:  IRRRDDAPKPGQPGQAPRVGAG

XP_022939944.1 40S ribosomal protein S26-3-like [Cucurbita moschata]1.2e-6299.18Show/hide
Query:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQRF
        TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQRF
Subjt:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQRF

Query:  IRRRDDAPKPGQPGQAPRVGAG
        IRRR+DAPKPGQPGQAPRVGAG
Subjt:  IRRRDDAPKPGQPGQAPRVGAG

XP_038884330.1 40S ribosomal protein S26-3-like [Benincasa hispida]6.8e-6397.6Show/hide
Query:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQRF
        TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRR R+PPQRF
Subjt:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQRF

Query:  IRRRDDAPKPGQPGQAPRVGAGTAP
        IRRRDDAPKPGQPGQAPRVGAG AP
Subjt:  IRRRDDAPKPGQPGQAPRVGAGTAP

TrEMBL top hitse value%identityAlignment
A0A1S3C4P8 40S ribosomal protein S261.6e-6296.8Show/hide
Query:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQRF
        TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRR R+PPQRF
Subjt:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQRF

Query:  IRRRDDAPKPGQPGQAPRVGAGTAP
        IRRRDDAPKPGQPGQ PRVGAG AP
Subjt:  IRRRDDAPKPGQPGQAPRVGAGTAP

A0A5A7UA01 40S ribosomal protein S261.6e-6296.8Show/hide
Query:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQRF
        TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRR R+PPQRF
Subjt:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQRF

Query:  IRRRDDAPKPGQPGQAPRVGAGTAP
        IRRRDDAPKPGQPGQ PRVGAG AP
Subjt:  IRRRDDAPKPGQPGQAPRVGAGTAP

A0A6J1BXZ8 40S ribosomal protein S263.2e-66100Show/hide
Query:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQRF
        TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQRF
Subjt:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQRF

Query:  IRRRDDAPKPGQPGQAPRVGAGTAPRT
        IRRRDDAPKPGQPGQAPRVGAGTAPRT
Subjt:  IRRRDDAPKPGQPGQAPRVGAGTAPRT

A0A6J1FIL8 40S ribosomal protein S265.6e-6399.18Show/hide
Query:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQRF
        TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQRF
Subjt:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQRF

Query:  IRRRDDAPKPGQPGQAPRVGAG
        IRRR+DAPKPGQPGQAPRVGAG
Subjt:  IRRRDDAPKPGQPGQAPRVGAG

A0A6J1K0V7 40S ribosomal protein S265.6e-6399.18Show/hide
Query:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQRF
        TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQRF
Subjt:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQRF

Query:  IRRRDDAPKPGQPGQAPRVGAG
        IRRR+DAPKPGQPGQAPRVGAG
Subjt:  IRRRDDAPKPGQPGQAPRVGAG

SwissProt top hitse value%identityAlignment
O45499 40S ribosomal protein S261.3e-3767.52Show/hide
Query:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQRF
        TFKRRN GRNK  RGHV FIRC+NCG+CCPKDKAIK+F+VRNIVE AAVRD+ +A  Y QY LPKLY K+ YC++CAIHS VVR RSR  RR R+PP RF
Subjt:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQRF

Query:  IRRRDDAPKPGQPGQAP
          +R  A +PG PG  P
Subjt:  IRRRDDAPKPGQPGQAP

P49206 40S ribosomal protein S26-16.0e-5482.17Show/hide
Query:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQRF
        TFKRRNGGRNKH RGHV  IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VY+ YTLPKLYAK QYCVSCAIHSHVVRVRSRT+RR R PP RF
Subjt:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQRF

Query:  IRRRDDAPKPGQPGQAPR---VGAGTAPR
         RR++D PKPGQPGQAPR    GA  APR
Subjt:  IRRRDDAPKPGQPGQAPR---VGAGTAPR

P49216 40S ribosomal protein S263.2e-4775.4Show/hide
Query:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQRF
        TFKRRNGGRNKHGRGHVK+IRCSNC KCCPKDKAIKRF VRNIVEQAA+RDVQEACV+D Y LPKLYAK+ +CVSCAIH+H+VRVRSR +RR R PP+RF
Subjt:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQRF

Query:  IRRRDDAPKPGQP-GQAPRVGAGTAP
         RRR+D P+  +P G AP  G   AP
Subjt:  IRRRDDAPKPGQP-GQAPRVGAGTAP

Q8LPJ7 40S ribosomal protein S26-23.0e-5380.15Show/hide
Query:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQRF
        TFKRRNGGRNKH RGHV  IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VY+ YTLPKLYAK QYCVSCAIHSHVVRVRSRT+RR R PP RF
Subjt:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQRF

Query:  IRRRDDAPKPGQPGQAPR-----VGAGTAPR
         RR++D PKPGQPGQAPR       A  APR
Subjt:  IRRRDDAPKPGQPGQAPR-----VGAGTAPR

Q9LYK9 40S ribosomal protein S26-31.0e-5382.81Show/hide
Query:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQRF
        TFKRRNGGRNKH RGHVK IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VY+ YTLPKLYAK QYCVSCAIHSHVVRVRSRT+RR R PP RF
Subjt:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQRF

Query:  IRRRDDAPKPGQPGQAPRV--GAGTAPR
         RR++D PKP QPGQAPR   GA  APR
Subjt:  IRRRDDAPKPGQPGQAPRV--GAGTAPR

Arabidopsis top hitse value%identityAlignment
AT2G40510.1 Ribosomal protein S26e family protein2.1e-5480.15Show/hide
Query:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQRF
        TFKRRNGGRNKH RGHV  IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VY+ YTLPKLYAK QYCVSCAIHSHVVRVRSRT+RR R PP RF
Subjt:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQRF

Query:  IRRRDDAPKPGQPGQAPR-----VGAGTAPR
         RR++D PKPGQPGQAPR       A  APR
Subjt:  IRRRDDAPKPGQPGQAPR-----VGAGTAPR

AT2G40590.1 Ribosomal protein S26e family protein4.2e-5582.17Show/hide
Query:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQRF
        TFKRRNGGRNKH RGHV  IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VY+ YTLPKLYAK QYCVSCAIHSHVVRVRSRT+RR R PP RF
Subjt:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQRF

Query:  IRRRDDAPKPGQPGQAPR---VGAGTAPR
         RR++D PKPGQPGQAPR    GA  APR
Subjt:  IRRRDDAPKPGQPGQAPR---VGAGTAPR

AT3G56340.1 Ribosomal protein S26e family protein7.2e-5582.81Show/hide
Query:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQRF
        TFKRRNGGRNKH RGHVK IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VY+ YTLPKLYAK QYCVSCAIHSHVVRVRSRT+RR R PP RF
Subjt:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQRF

Query:  IRRRDDAPKPGQPGQAPRV--GAGTAPR
         RR++D PKP QPGQAPR   GA  APR
Subjt:  IRRRDDAPKPGQPGQAPRV--GAGTAPR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAACTTTTGGAGCATAAGCCTCTGAAACAGAAAGCTTCCAAGGGTTTTGGGGTTTTGTTGTATAAGCCATTGTCAGGAAGCTTAACTTCCGGCCTTTGTCTTCCAGA
TGACAAAGCTGGCGATCATCCCATGTCTTTGTGGTTCAATCATGCCGCATTTCCAGTTAATTTTAGTACATTTTATGTGATTGGAAAACTCCCCAGTTACATTTCGGGTT
CTTGGGCATCTAGAGACATGATTGCATCTGCCATTTGTCTGCAAACAGCTACAGAATCACCATATGAAACATCCGAGACTTTCAAGCGCAGGAATGGTGGACGCAACAAG
CATGGACGCGGACACGTGAAATTTATCCGCTGCTCCAACTGCGGCAAATGCTGCCCCAAGGACAAGGCCATCAAGAGGTTCCTTGTCAGGAACATCGTGGAGCAGGCAGC
TGTTAGGGATGTTCAGGAAGCCTGTGTCTATGATCAGTACACTCTTCCTAAGCTGTATGCTAAGATGCAGTACTGCGTTTCCTGTGCCATTCACTCTCACGTTGTGAGGG
TTCGATCACGCACTGACAGGAGGAAGCGTGATCCTCCACAGCGCTTCATTAGACGCAGGGATGACGCACCAAAGCCTGGGCAGCCAGGACAGGCCCCTCGTGTTGGAGCT
GGAACTGCACCCCGTACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAACTTTTGGAGCATAAGCCTCTGAAACAGAAAGCTTCCAAGGGTTTTGGGGTTTTGTTGTATAAGCCATTGTCAGGAAGCTTAACTTCCGGCCTTTGTCTTCCAGA
TGACAAAGCTGGCGATCATCCCATGTCTTTGTGGTTCAATCATGCCGCATTTCCAGTTAATTTTAGTACATTTTATGTGATTGGAAAACTCCCCAGTTACATTTCGGGTT
CTTGGGCATCTAGAGACATGATTGCATCTGCCATTTGTCTGCAAACAGCTACAGAATCACCATATGAAACATCCGAGACTTTCAAGCGCAGGAATGGTGGACGCAACAAG
CATGGACGCGGACACGTGAAATTTATCCGCTGCTCCAACTGCGGCAAATGCTGCCCCAAGGACAAGGCCATCAAGAGGTTCCTTGTCAGGAACATCGTGGAGCAGGCAGC
TGTTAGGGATGTTCAGGAAGCCTGTGTCTATGATCAGTACACTCTTCCTAAGCTGTATGCTAAGATGCAGTACTGCGTTTCCTGTGCCATTCACTCTCACGTTGTGAGGG
TTCGATCACGCACTGACAGGAGGAAGCGTGATCCTCCACAGCGCTTCATTAGACGCAGGGATGACGCACCAAAGCCTGGGCAGCCAGGACAGGCCCCTCGTGTTGGAGCT
GGAACTGCACCCCGTACTTGA
Protein sequenceShow/hide protein sequence
MKLLEHKPLKQKASKGFGVLLYKPLSGSLTSGLCLPDDKAGDHPMSLWFNHAAFPVNFSTFYVIGKLPSYISGSWASRDMIASAICLQTATESPYETSETFKRRNGGRNK
HGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQRFIRRRDDAPKPGQPGQAPRVGA
GTAPRT